RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 TRAPPC11Q7Z392 1133 aa18.75■□□□□ 0.59
ARHGEF28-203ENST00000426542 KCNF1Q9H3M0 494 aa18.75■□□□□ 0.59
ARHGEF28-203ENST00000426542 SOAT1P35610 550 aa18.75■□□□□ 0.59
ARHGEF28-203ENST00000426542 WDR48Q8TAF3 677 aa18.75■□□□□ 0.59
ARHGEF28-203ENST00000426542 PPP2R3CQ969Q6 453 aa18.75■□□□□ 0.59
ARHGEF28-203ENST00000426542 STAMBPL1Q96FJ0 436 aa18.75■□□□□ 0.59
ARHGEF28-203ENST00000426542 GPR63Q9BZJ6 419 aa18.75■□□□□ 0.59
ARHGEF28-203ENST00000426542 IL1RL2Q9HB29 575 aa18.75■□□□□ 0.59
ARHGEF28-203ENST00000426542 ZFYVE28Q9HCC9 887 aa18.75■□□□□ 0.59
ARHGEF28-203ENST00000426542 PCDHB2Q9Y5E7 798 aa18.75■□□□□ 0.59
ARHGEF28-203ENST00000426542 DGKIO75912 1065 aa18.74■□□□□ 0.59
ARHGEF28-203ENST00000426542 WDR47O94967 919 aa18.74■□□□□ 0.59
ARHGEF28-203ENST00000426542 NCAM1P13591 858 aa18.74■□□□□ 0.59
ARHGEF28-203ENST00000426542 EPC2Q52LR7 807 aa18.74■□□□□ 0.59
ARHGEF28-203ENST00000426542 PCYOX1LQ8NBM8 494 aa18.74■□□□□ 0.59
ARHGEF28-203ENST00000426542 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.74■□□□□ 0.593e-7■■■■■ 62.8
ARHGEF28-203ENST00000426542 EME1Q96AY2 570 aa18.74■□□□□ 0.59
ARHGEF28-203ENST00000426542 THTPAQ9BU02 230 aa18.74■□□□□ 0.59
ARHGEF28-203ENST00000426542 PSD3Q9NYI0 1048 aa18.74■□□□□ 0.59
ARHGEF28-203ENST00000426542 KRT16P08779 473 aa18.74■□□□□ 0.59
ARHGEF28-203ENST00000426542 TRPC1P48995 793 aa18.74■□□□□ 0.59
ARHGEF28-203ENST00000426542 RGS4P49798 205 aa18.74■□□□□ 0.59
ARHGEF28-203ENST00000426542 GRIN1Q05586 938 aa18.74■□□□□ 0.59
ARHGEF28-203ENST00000426542 E4F1Q66K89 784 aaPredicted RBP18.74■□□□□ 0.59
ARHGEF28-203ENST00000426542 LVRNQ6Q4G3 990 aa18.74■□□□□ 0.59
ARHGEF28-203ENST00000426542 SCAF8Q9UPN6 1271 aaKnown RBP18.74■□□□□ 0.59
ARHGEF28-203ENST00000426542 GLI2P10070 1586 aa18.74■□□□□ 0.59
ARHGEF28-203ENST00000426542 EDRF1Q3B7T1 1238 aa18.74■□□□□ 0.59
ARHGEF28-203ENST00000426542 CCT8L2Q96SF2 557 aa18.74■□□□□ 0.59
ARHGEF28-203ENST00000426542 ADCY3O60266 1144 aa18.74■□□□□ 0.59
ARHGEF28-203ENST00000426542 CST8O60676 142 aa18.74■□□□□ 0.59
ARHGEF28-203ENST00000426542 CYP2C9P11712 490 aa18.74■□□□□ 0.59
ARHGEF28-203ENST00000426542 PCSK1P29120 753 aa18.74■□□□□ 0.59
ARHGEF28-203ENST00000426542 MRPL28Q13084 256 aaKnown RBP18.74■□□□□ 0.59
ARHGEF28-203ENST00000426542 CCNI2Q6ZMN8 369 aaPredicted RBP18.74■□□□□ 0.59
ARHGEF28-203ENST00000426542 CELF4Q9BZC1 486 aaKnown RBP18.74■□□□□ 0.59
ARHGEF28-203ENST00000426542 SNRPAP09012 282 aaKnown RBP18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 HARS2P49590 506 aaKnown RBP18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 C10orf120Q5SQS8 335 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 DEPDC1Q5TB30 811 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 CAPRIN2Q6IMN6 1127 aaKnown RBP18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 PRR5LQ6MZQ0 368 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 GJB7Q6PEY0 223 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 GLB1LQ6UWU2 654 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 HORMAD1Q86X24 394 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 FAM71DQ8N9W8 422 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 KCNK16Q96T55 309 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 ASCC2Q9H1I8 757 aaPredicted RBP18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 HACL1Q9UJ83 578 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 NAGPAQ9UK23 515 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 IGSF9BQ9UPX0 1349 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 KLHL2O95198 593 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 RASA1P20936 1047 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 PRUNE1Q86TP1 453 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 IL17RAQ96F46 866 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 KIF2CQ99661 725 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 FAM129AQ9BZQ8 928 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 PCDHB7Q9Y5E2 793 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 PSMD14O00487 310 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 DAB1O75553 588 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 CHRM3P20309 590 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 TRIM28Q13263 835 aaKnown RBP18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 EFHC1Q5JVL4 640 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 AGBL2Q5U5Z8 902 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 AGGF1Q8N302 714 aaeCLIP18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 CYFIP2Q96F07 1278 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 XPO6Q96QU8 1125 aaKnown RBP18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 C16orf96A6NNT2 1141 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 CLASP2O75122 1294 aaKnown RBP18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 NBPF20Q3BBV1 942 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 KIRREL3Q8IZU9 778 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 GALNT4Q8N4A0 578 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 FEZF2Q8TBJ5 459 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 SGSM3Q96HU1 749 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 HPDLQ96IR7 371 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 JMJD4Q9H9V9 463 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 H2AFY2Q9P0M6 372 aaPredicted RBP18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 KDM1AO60341 852 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 RHOBTB1O94844 696 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 TMEM253P0C7T8 217 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 HHIPL2Q6UWX4 724 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 INPP5DQ92835 1189 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 PLEKHA8Q96JA3 519 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 AGBL1Q96MI9 1066 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 SPATA16Q9BXB7 569 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 NIF3L1Q9GZT8 377 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 GGA3Q9NZ52 723 aa18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 CHORDC1Q9UHD1 332 aaPredicted RBP18.73■□□□□ 0.59
ARHGEF28-203ENST00000426542 KRT87PA6NCN2 255 aa18.72■□□□□ 0.59
ARHGEF28-203ENST00000426542 DGKDQ16760 1214 aa18.72■□□□□ 0.59
ARHGEF28-203ENST00000426542 C11orf96Q7Z7L8 435 aa18.72■□□□□ 0.59
ARHGEF28-203ENST00000426542 CHSY1Q86X52 802 aa18.72■□□□□ 0.59
ARHGEF28-203ENST00000426542 ACSF2Q96CM8 615 aaPredicted RBP18.72■□□□□ 0.59
ARHGEF28-203ENST00000426542 ERP27Q96DN0 273 aa18.72■□□□□ 0.59
ARHGEF28-203ENST00000426542 CMTM5Q96DZ9 223 aa18.72■□□□□ 0.59
ARHGEF28-203ENST00000426542 THAP11Q96EK4 314 aa18.72■□□□□ 0.59
ARHGEF28-203ENST00000426542 ERAP1Q9NZ08 941 aa18.72■□□□□ 0.59
ARHGEF28-203ENST00000426542 ATP11BQ9Y2G3 1177 aa18.72■□□□□ 0.59
ARHGEF28-203ENST00000426542 PRMT7Q9NVM4 692 aaPredicted RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms