RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 SOWAHDA6NJG2 315 aa11.01□□□□□ -0.65
MDC1-205ENST00000425072 A8MXQ7 604 aa11.01□□□□□ -0.65
MDC1-205ENST00000425072 CILPO75339 1184 aa11.01□□□□□ -0.65
MDC1-205ENST00000425072 TUBB4AP04350 444 aa11.01□□□□□ -0.65
MDC1-205ENST00000425072 ODC1P11926 461 aa11.01□□□□□ -0.65
MDC1-205ENST00000425072 WARSP23381 471 aaKnown RBP11.01□□□□□ -0.65
MDC1-205ENST00000425072 GNA15P30679 374 aa11.01□□□□□ -0.65
MDC1-205ENST00000425072 KIF11P52732 1056 aa11.01□□□□□ -0.65
MDC1-205ENST00000425072 WDR5P61964 334 aaKnown RBP11.01□□□□□ -0.65
MDC1-205ENST00000425072 CNGA2Q16280 664 aa11.01□□□□□ -0.65
MDC1-205ENST00000425072 SOWAHAQ2M3V2 549 aa11.01□□□□□ -0.65
MDC1-205ENST00000425072 ASTE1Q2TB18 679 aaPredicted RBP11.01□□□□□ -0.65
MDC1-205ENST00000425072 CCDC122Q5T0U0 273 aa11.01□□□□□ -0.65
MDC1-205ENST00000425072 RAD9BQ6WBX8 426 aa11.01□□□□□ -0.65
MDC1-205ENST00000425072 C16orf59Q7L2K0 433 aa11.01□□□□□ -0.65
MDC1-205ENST00000425072 OTOP2Q7RTS6 562 aa11.01□□□□□ -0.65
MDC1-205ENST00000425072 ZNF571Q7Z3V5 609 aaPredicted RBP11.01□□□□□ -0.65
MDC1-205ENST00000425072 SLC47A2Q86VL8 602 aa11.01□□□□□ -0.65
MDC1-205ENST00000425072 ZNF280BQ86YH2 543 aa11.01□□□□□ -0.65
MDC1-205ENST00000425072 CMTR2Q8IYT2 770 aaKnown RBP11.01□□□□□ -0.65
MDC1-205ENST00000425072 CRYBG2Q8N1P7 616 aa11.01□□□□□ -0.65
MDC1-205ENST00000425072 LRRC43Q8N309 656 aa11.01□□□□□ -0.65
MDC1-205ENST00000425072 ZNF606Q8WXB4 792 aa11.01□□□□□ -0.65
MDC1-205ENST00000425072 ELMO3Q96BJ8 720 aa11.01□□□□□ -0.65
MDC1-205ENST00000425072 ARID3AQ99856 593 aa11.01□□□□□ -0.65
MDC1-205ENST00000425072 ZBED2Q9BTP6 218 aa11.01□□□□□ -0.65
MDC1-205ENST00000425072 ZNF518BQ9C0D4 1074 aa11.01□□□□□ -0.65
MDC1-205ENST00000425072 AAASQ9NRG9 546 aa11.01□□□□□ -0.65
MDC1-205ENST00000425072 PUF60Q9UHX1 559 aaKnown RBP11.01□□□□□ -0.65
MDC1-205ENST00000425072 INSL6Q9Y581 213 aa11.01□□□□□ -0.65
MDC1-205ENST00000425072 ADGRG1Q9Y653 693 aa11.01□□□□□ -0.65
MDC1-205ENST00000425072 SLC4A7Q9Y6M7 1214 aa11.01□□□□□ -0.65
MDC1-205ENST00000425072 RANBP2P49792 3224 aaKnown RBP11.01□□□□□ -0.65
MDC1-205ENST00000425072 ZBBXA8MT70 800 aa11□□□□□ -0.65
MDC1-205ENST00000425072 ESPNB1AK53 854 aa11□□□□□ -0.65
MDC1-205ENST00000425072 RBAK-RBAKDNI3L0D1 243 aa11□□□□□ -0.65
MDC1-205ENST00000425072 M0QZQ0 153 aa11□□□□□ -0.65
MDC1-205ENST00000425072 NRP1O14786 923 aa11□□□□□ -0.65
MDC1-205ENST00000425072 PPEF2O14830 753 aa11□□□□□ -0.65
MDC1-205ENST00000425072 SPTLC1O15269 473 aa11□□□□□ -0.65
MDC1-205ENST00000425072 THAP12O43422 761 aa11□□□□□ -0.65
MDC1-205ENST00000425072 RTN2O75298 545 aa11□□□□□ -0.65
MDC1-205ENST00000425072 CYP11A1P05108 521 aa11□□□□□ -0.65
MDC1-205ENST00000425072 GALTP07902 379 aa11□□□□□ -0.65
MDC1-205ENST00000425072 PLEKP08567 350 aaPredicted RBP11□□□□□ -0.65
MDC1-205ENST00000425072 TYMPP19971 482 aa11□□□□□ -0.65
MDC1-205ENST00000425072 AARSP49588 968 aaKnown RBP eCLIP11□□□□□ -0.65
MDC1-205ENST00000425072 ZNF132P52740 706 aa11□□□□□ -0.65
MDC1-205ENST00000425072 NDST1P52848 882 aa11□□□□□ -0.65
MDC1-205ENST00000425072 RAD23BP54727 409 aa11□□□□□ -0.65
MDC1-205ENST00000425072 SNX16P57768 344 aa11□□□□□ -0.65
MDC1-205ENST00000425072 KIF5AQ12840 1032 aa11□□□□□ -0.65
MDC1-205ENST00000425072 BTG3Q14201 252 aaPredicted RBP11□□□□□ -0.65
MDC1-205ENST00000425072 TIGD5Q53EQ6 642 aa11□□□□□ -0.65
MDC1-205ENST00000425072 SGO2Q562F6 1265 aa11□□□□□ -0.65
MDC1-205ENST00000425072 TMEM240Q5SV17 173 aa11□□□□□ -0.65
MDC1-205ENST00000425072 SPOUT1Q5T280 376 aaKnown RBP11□□□□□ -0.65
MDC1-205ENST00000425072 ALKBH5Q6P6C2 394 aaKnown RBP11□□□□□ -0.65
MDC1-205ENST00000425072 SCARA5Q6ZMJ2 495 aa11□□□□□ -0.65
MDC1-205ENST00000425072 KIAA1328Q86T90 577 aa11□□□□□ -0.65
MDC1-205ENST00000425072 NOP9Q86U38 636 aaKnown RBP11□□□□□ -0.65
MDC1-205ENST00000425072 SLC30A5Q8TAD4 765 aa11□□□□□ -0.65
MDC1-205ENST00000425072 EPS8L1Q8TE68 723 aa11□□□□□ -0.65
MDC1-205ENST00000425072 HERVK_113Q902F9 699 aa11□□□□□ -0.65
MDC1-205ENST00000425072 ZNF689Q96CS4 500 aaPredicted RBP11□□□□□ -0.65
MDC1-205ENST00000425072 SUSD3Q96L08 255 aa11□□□□□ -0.65
MDC1-205ENST00000425072 OXCT2Q9BYC2 517 aaPredicted RBP11□□□□□ -0.65
MDC1-205ENST00000425072 SMYD3Q9H7B4 428 aa11□□□□□ -0.65
MDC1-205ENST00000425072 SEPT11Q9NVA2 429 aaKnown RBP11□□□□□ -0.65
MDC1-205ENST00000425072 STK39Q9UEW8 545 aa11□□□□□ -0.65
MDC1-205ENST00000425072 INTUQ9ULD6 942 aa11□□□□□ -0.65
MDC1-205ENST00000425072 PCDHB8Q9UN66 801 aa11□□□□□ -0.65
MDC1-205ENST00000425072 COLQQ9Y215 455 aaPredicted RBP11□□□□□ -0.65
MDC1-205ENST00000425072 STXBP5LQ9Y2K9 1186 aa11□□□□□ -0.65
MDC1-205ENST00000425072 PPP2R2CQ9Y2T4 447 aa11□□□□□ -0.65
MDC1-205ENST00000425072 CEP83Q9Y592 693 aa11□□□□□ -0.65
MDC1-205ENST00000425072 PCDHA13Q9Y5I0 950 aa11□□□□□ -0.65
MDC1-205ENST00000425072 UNC80Q8N2C7 3258 aa11□□□□□ -0.65
MDC1-205ENST00000425072 BRCA2P51587 3418 aa11□□□□□ -0.65
MDC1-205ENST00000425072 FNDC1Q4ZHG4 1894 aaPredicted RBP11□□□□□ -0.65
MDC1-205ENST00000425072 A0A087X0T9 212 aa10.99□□□□□ -0.65
MDC1-205ENST00000425072 GABRDO14764 452 aa10.99□□□□□ -0.65
MDC1-205ENST00000425072 SYN3O14994 580 aa10.99□□□□□ -0.65
MDC1-205ENST00000425072 KRT86O43790 486 aa10.99□□□□□ -0.65
MDC1-205ENST00000425072 H2AFZP0C0S5 128 aa10.99□□□□□ -0.65
MDC1-205ENST00000425072 FAM228BP0C875 321 aa10.99□□□□□ -0.65
MDC1-205ENST00000425072 PNMA6AP0CW24 399 aaPredicted RBP10.99□□□□□ -0.65
MDC1-205ENST00000425072 CD19P15391 556 aa10.99□□□□□ -0.65
MDC1-205ENST00000425072 PCSK1P29120 753 aa10.99□□□□□ -0.65
MDC1-205ENST00000425072 BCAR1P56945 870 aa10.99□□□□□ -0.65
MDC1-205ENST00000425072 SLC8A3P57103 927 aa10.99□□□□□ -0.65
MDC1-205ENST00000425072 GFPT1Q06210 699 aaPredicted RBP10.99□□□□□ -0.65
MDC1-205ENST00000425072 ZNF394Q53GI3 561 aa10.99□□□□□ -0.65
MDC1-205ENST00000425072 E4F1Q66K89 784 aaPredicted RBP10.99□□□□□ -0.65
MDC1-205ENST00000425072 ZNF662Q6ZS27 426 aa10.99□□□□□ -0.65
MDC1-205ENST00000425072 H2AFVQ71UI9 128 aa10.99□□□□□ -0.65
MDC1-205ENST00000425072 GLYCTKQ8IVS8 523 aa10.99□□□□□ -0.65
MDC1-205ENST00000425072 ADGRF2Q8IZF7 708 aa10.99□□□□□ -0.65
MDC1-205ENST00000425072 CCAR2Q8N163 923 aaKnown RBP10.99□□□□□ -0.65
MDC1-205ENST00000425072 PDCL2Q8N4E4 241 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms