RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 TELO2Q9Y4R8 837 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 GPR45Q9Y5Y3 372 aa4.12□□□□□ -1.75
SF3B1-205ENST00000424674 C17orf113A0A1B0GUU1 675 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 TCRBV5S4A2TA0A5A2 114 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 CCDC66A2RUB6 948 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 NPEPPSL1A6NEC2 478 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 TMEM110-MUSTN1A8MSY1 372 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 TISP43B9A030 160 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 B9A039 149 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 FAM47E-STBD1D6RA91 191 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 PES1O00541 588 aaKnown RBP4.11□□□□□ -1.75
SF3B1-205ENST00000424674 ACKR2O00590 384 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 APOL1O14791 398 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 MATN3O15232 486 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 TSPAN3O60637 253 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 TMEM63AO94886 807 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 KLHL18O94889 574 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 RTN3O95197 1032 aaPredicted RBP4.11□□□□□ -1.75
SF3B1-205ENST00000424674 CHGBP05060 677 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 SCG2P13521 617 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 MSH2P43246 934 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 PHKA1P46020 1223 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 HSPA7P48741 367 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 DNM2P50570 870 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 MECP2P51608 486 aaKnown RBP4.11□□□□□ -1.75
SF3B1-205ENST00000424674 SLC16A1P53985 500 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 NR1H2P55055 460 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 PPP2CBP62714 309 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 PPP2CAP67775 309 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 PMS2P11Q13670 270 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 RASA2Q15283 850 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 ASIC2Q16515 512 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 FAM110CQ1W6H9 321 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 SKIDA1Q1XH10 827 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 MPEG1Q2M385 716 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 ARL13BQ3SXY8 428 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 KCTD1Q719H9 257 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 RALYLQ86SE5 291 aaKnown RBP4.11□□□□□ -1.75
SF3B1-205ENST00000424674 NLRP14Q86W24 1093 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 OSTM1Q86WC4 334 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 CIR1Q86X95 450 aaPredicted RBP4.11□□□□□ -1.75
SF3B1-205ENST00000424674 PRR18Q8N4B5 295 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 TCP11L2Q8N4U5 519 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 CCDC33Q8N5R6 958 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 ATG16L2Q8NAA4 619 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 NUDT10Q8NFP7 164 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 GSDMBQ8TAX9 411 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 HTRA1Q92743 480 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 NSUN4Q96CB9 384 aaKnown RBP4.11□□□□□ -1.75
SF3B1-205ENST00000424674 NUDT11Q96G61 164 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 MAELQ96JY0 434 aaKnown RBP4.11□□□□□ -1.75
SF3B1-205ENST00000424674 ORAI2Q96SN7 254 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 ALG1Q9BT22 464 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 PI4K2AQ9BTU6 479 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 SORBS1Q9BX66 1292 aaKnown RBP4.11□□□□□ -1.75
SF3B1-205ENST00000424674 SENP6Q9GZR1 1112 aaPredicted RBP4.11□□□□□ -1.75
SF3B1-205ENST00000424674 XAB2Q9HCS7 855 aaKnown RBP4.11□□□□□ -1.75
SF3B1-205ENST00000424674 CATSPERZQ9NTU4 200 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 POGKQ9P215 609 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 ARHGAP20Q9P2F6 1191 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 ZFP69BQ9UJL9 534 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 ADAM29Q9UKF5 820 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 DSEQ9UL01 958 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 ZDHHC9Q9Y397 364 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 ATP6V0A2Q9Y487 856 aa4.11□□□□□ -1.75
SF3B1-205ENST00000424674 ZFP37Q9Y6Q3 630 aaPredicted RBP4.11□□□□□ -1.75
SF3B1-205ENST00000424674 CCDC69A6NI79 296 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 ZNF839A8K0R7 811 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 H0Y626 953 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 H7C1D1 291 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 PLOD2O00469 737 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 NDC80O14777 642 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 GSTA4O15217 222 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 GPR42O15529 346 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 TGM5O43548 720 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 DOK2O60496 412 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 PLA2G6O60733 806 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 NDUFS2O75306 463 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 IL18RAPO95256 599 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 SCGB1D1O95968 90 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 KNG1P01042 644 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 MT-ND3P03897 115 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 SRGAP2BP0DMP2 458 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 ZBTB48P10074 688 aaPredicted RBP4.1□□□□□ -1.75
SF3B1-205ENST00000424674 EEF2P13639 858 aaKnown RBP4.1□□□□□ -1.75
SF3B1-205ENST00000424674 IL11P20809 199 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 ATP5F1P24539 256 aaPredicted RBP4.1□□□□□ -1.75
SF3B1-205ENST00000424674 ACTN2P35609 894 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 GLRBP48167 497 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 MTNR1BP49286 362 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 MRE11P49959 708 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 TUBP50607 506 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 ITGA8P53708 1063 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 EPHA5P54756 1037 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 CSE1LP55060 971 aaKnown RBP4.1□□□□□ -1.75
SF3B1-205ENST00000424674 ALDH6A1Q02252 535 aaKnown RBP4.1□□□□□ -1.75
SF3B1-205ENST00000424674 LRRC74AQ0VAA2 488 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 GALNT1Q10472 559 aaPredicted RBP4.1□□□□□ -1.75
SF3B1-205ENST00000424674 ADAM15Q13444 863 aa4.1□□□□□ -1.75
SF3B1-205ENST00000424674 DAG1Q14118 895 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms