RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 TMEM132BQ14DG7 1078 aa6.54□□□□□ -1.36
LINC00458-201ENST00000423442 CCDC96Q2M329 555 aa6.54□□□□□ -1.36
LINC00458-201ENST00000423442 KIAA1755Q5JYT7 1200 aa6.54□□□□□ -1.36
LINC00458-201ENST00000423442 SLC35F1Q5T1Q4 408 aa6.54□□□□□ -1.36
LINC00458-201ENST00000423442 VPS53Q5VIR6 699 aa6.54□□□□□ -1.36
LINC00458-201ENST00000423442 SNRNP48Q6IEG0 339 aaKnown RBP6.54□□□□□ -1.36
LINC00458-201ENST00000423442 TCTN3Q6NUS6 607 aa6.54□□□□□ -1.36
LINC00458-201ENST00000423442 GPR155Q7Z3F1 870 aa6.54□□□□□ -1.36
LINC00458-201ENST00000423442 RALYLQ86SE5 291 aaKnown RBP6.54□□□□□ -1.36
LINC00458-201ENST00000423442 DTX3Q8N9I9 347 aa6.54□□□□□ -1.36
LINC00458-201ENST00000423442 PIP4K2CQ8TBX8 421 aa6.54□□□□□ -1.36
LINC00458-201ENST00000423442 CCDC136Q96JN2 1154 aa6.54□□□□□ -1.36
LINC00458-201ENST00000423442 NUP88Q99567 741 aaPredicted RBP6.54□□□□□ -1.36
LINC00458-201ENST00000423442 UBAC1Q9BSL1 405 aa6.54□□□□□ -1.36
LINC00458-201ENST00000423442 LRFN3Q9BTN0 628 aa6.54□□□□□ -1.36
LINC00458-201ENST00000423442 TEX13BQ9BXU2 312 aa6.54□□□□□ -1.36
LINC00458-201ENST00000423442 SEMA4AQ9H3S1 761 aa6.54□□□□□ -1.36
LINC00458-201ENST00000423442 PRDM12Q9H4Q4 367 aa6.54□□□□□ -1.36
LINC00458-201ENST00000423442 KAT14Q9H8E8 782 aa6.54□□□□□ -1.36
LINC00458-201ENST00000423442 INCENPQ9NQS7 918 aa6.54□□□□□ -1.36
LINC00458-201ENST00000423442 TCP11L1Q9NUJ3 509 aa6.54□□□□□ -1.36
LINC00458-201ENST00000423442 FBXO28Q9NVF7 368 aa6.54□□□□□ -1.36
LINC00458-201ENST00000423442 PPARGC1AQ9UBK2 798 aaKnown RBP6.54□□□□□ -1.36
LINC00458-201ENST00000423442 INPP5FQ9Y2H2 1132 aa6.54□□□□□ -1.36
LINC00458-201ENST00000423442 SMCHD1A6NHR9 2005 aa6.54□□□□□ -1.36
LINC00458-201ENST00000423442 CHD9Q3L8U1 2897 aa6.53□□□□□ -1.36
LINC00458-201ENST00000423442 IGKV6D-41A0A0C4DH26 115 aa6.53□□□□□ -1.36
LINC00458-201ENST00000423442 GRXCR1A8MXD5 290 aa6.53□□□□□ -1.36
LINC00458-201ENST00000423442 B4DLN1 442 aa6.53□□□□□ -1.36
LINC00458-201ENST00000423442 NMT2O60551 498 aa6.53□□□□□ -1.36
LINC00458-201ENST00000423442 CLTBP09497 229 aa6.53□□□□□ -1.36
LINC00458-201ENST00000423442 HOXC6P09630 235 aa6.53□□□□□ -1.36
LINC00458-201ENST00000423442 FGRP09769 529 aa6.53□□□□□ -1.36
LINC00458-201ENST00000423442 GRIA2P42262 883 aa6.53□□□□□ -1.36
LINC00458-201ENST00000423442 MRPL12P52815 198 aaKnown RBP6.53□□□□□ -1.36
LINC00458-201ENST00000423442 OAZ1P54368 228 aa6.53□□□□□ -1.36
LINC00458-201ENST00000423442 FPGSQ05932 587 aa6.53□□□□□ -1.36
LINC00458-201ENST00000423442 GRB14Q14449 540 aa6.53□□□□□ -1.36
LINC00458-201ENST00000423442 SART3Q15020 963 aaKnown RBP6.53□□□□□ -1.36
LINC00458-201ENST00000423442 TKFCQ3LXA3 575 aa6.53□□□□□ -1.36
LINC00458-201ENST00000423442 VASNQ6EMK4 673 aa6.53□□□□□ -1.36
LINC00458-201ENST00000423442 MRM1Q6IN84 353 aaKnown RBP6.53□□□□□ -1.36
LINC00458-201ENST00000423442 Q6ZUG5 572 aa6.53□□□□□ -1.36
LINC00458-201ENST00000423442 CENPQQ7L2Z9 268 aaPredicted RBP6.53□□□□□ -1.36
LINC00458-201ENST00000423442 DGKHQ86XP1 1220 aa6.53□□□□□ -1.36
LINC00458-201ENST00000423442 LRRC47Q8N1G4 583 aaKnown RBP6.53□□□□□ -1.36
LINC00458-201ENST00000423442 MICAL1Q8TDZ2 1067 aa6.53□□□□□ -1.36
LINC00458-201ENST00000423442 DCAF4Q8WV16 495 aa6.53□□□□□ -1.36
LINC00458-201ENST00000423442 MRRFQ96E11 262 aaKnown RBP6.53□□□□□ -1.36
LINC00458-201ENST00000423442 MPHOSPH6Q99547 160 aaKnown RBP6.53□□□□□ -1.36
LINC00458-201ENST00000423442 EPHX3Q9H6B9 360 aa6.53□□□□□ -1.36
LINC00458-201ENST00000423442 RAVER2Q9HCJ3 691 aaKnown RBP6.53□□□□□ -1.36
LINC00458-201ENST00000423442 DLL4Q9NR61 685 aa6.53□□□□□ -1.36
LINC00458-201ENST00000423442 IL17RBQ9NRM6 502 aa6.53□□□□□ -1.36
LINC00458-201ENST00000423442 ACTR10Q9NZ32 417 aa6.53□□□□□ -1.36
LINC00458-201ENST00000423442 NPFFR2Q9Y5X5 522 aa6.53□□□□□ -1.36
LINC00458-201ENST00000423442 XIRP2A4UGR9 3374 aa6.53□□□□□ -1.36
LINC00458-201ENST00000423442 ZMYM6O95789 1325 aa6.52□□□□□ -1.37
LINC00458-201ENST00000423442 NPIPB8E9PQR5 432 aa6.52□□□□□ -1.37
LINC00458-201ENST00000423442 ATP2A1O14983 1001 aa6.52□□□□□ -1.37
LINC00458-201ENST00000423442 KIAA0355O15063 1070 aa6.52□□□□□ -1.37
LINC00458-201ENST00000423442 DHX16O60231 1041 aaKnown RBP6.52□□□□□ -1.37
LINC00458-201ENST00000423442 PLA2G6O60733 806 aa6.52□□□□□ -1.37
LINC00458-201ENST00000423442 DDAH1O94760 285 aa6.52□□□□□ -1.37
LINC00458-201ENST00000423442 KNG1P01042 644 aa6.52□□□□□ -1.37
LINC00458-201ENST00000423442 CAPNS1P04632 268 aa6.52□□□□□ -1.37
LINC00458-201ENST00000423442 CKMP06732 381 aa6.52□□□□□ -1.37
LINC00458-201ENST00000423442 CENPBP07199 599 aaPredicted RBP6.52□□□□□ -1.37
LINC00458-201ENST00000423442 PGK2P07205 417 aa6.52□□□□□ -1.37
LINC00458-201ENST00000423442 ALAS1P13196 640 aa6.52□□□□□ -1.37
LINC00458-201ENST00000423442 CHMLP26374 656 aa6.52□□□□□ -1.37
LINC00458-201ENST00000423442 GLRBP48167 497 aa6.52□□□□□ -1.37
LINC00458-201ENST00000423442 TRAF1Q13077 416 aa6.52□□□□□ -1.37
LINC00458-201ENST00000423442 LRRC41Q15345 812 aa6.52□□□□□ -1.37
LINC00458-201ENST00000423442 SMAD2Q15796 467 aaKnown RBP6.52□□□□□ -1.37
LINC00458-201ENST00000423442 PRAMEF19Q5SWL8 479 aa6.52□□□□□ -1.37
LINC00458-201ENST00000423442 GPATCH4Q5T3I0 446 aaKnown RBP6.52□□□□□ -1.37
LINC00458-201ENST00000423442 KCTD1Q719H9 257 aa6.52□□□□□ -1.37
LINC00458-201ENST00000423442 NOL8Q76FK4 1167 aaKnown RBP6.52□□□□□ -1.37
LINC00458-201ENST00000423442 ZNF589Q86UQ0 364 aaPredicted RBP6.52□□□□□ -1.37
LINC00458-201ENST00000423442 MSL3Q8N5Y2 521 aaKnown RBP6.52□□□□□ -1.37
LINC00458-201ENST00000423442 LRRC37BQ96QE4 947 aa6.52□□□□□ -1.37
LINC00458-201ENST00000423442 LMF1Q96S06 567 aa6.52□□□□□ -1.37
LINC00458-201ENST00000423442 TMEM47Q9BQJ4 181 aa6.52□□□□□ -1.37
LINC00458-201ENST00000423442 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.52□□□□□ -1.37
LINC00458-201ENST00000423442 ACAD9Q9H845 621 aa6.52□□□□□ -1.37
LINC00458-201ENST00000423442 SPC25Q9HBM1 224 aa6.52□□□□□ -1.37
LINC00458-201ENST00000423442 SLC38A10Q9HBR0 1119 aa6.52□□□□□ -1.37
LINC00458-201ENST00000423442 SLC6A20Q9NP91 592 aa6.52□□□□□ -1.37
LINC00458-201ENST00000423442 HOMER2Q9NSB8 354 aa6.52□□□□□ -1.37
LINC00458-201ENST00000423442 IGSF5Q9NSI5 407 aa6.52□□□□□ -1.37
LINC00458-201ENST00000423442 NRBP1Q9UHY1 535 aa6.52□□□□□ -1.37
LINC00458-201ENST00000423442 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.52□□□□□ -1.37
LINC00458-201ENST00000423442 NCOR1O75376 2440 aa6.52□□□□□ -1.37
LINC00458-201ENST00000423442 MYH6P13533 1939 aa6.52□□□□□ -1.37
LINC00458-201ENST00000423442 RAD50Q92878 1312 aa6.51□□□□□ -1.37
LINC00458-201ENST00000423442 ASB14A6NK59 587 aa6.51□□□□□ -1.37
LINC00458-201ENST00000423442 KRIT1O00522 736 aa6.51□□□□□ -1.37
LINC00458-201ENST00000423442 SEPT4O43236 478 aa6.51□□□□□ -1.37
LINC00458-201ENST00000423442 MAFKO60675 156 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms