RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 NT5DC4Q86YG4 428 aa16.39■□□□□ 0.21
USB1-202ENST00000423271 C1orf127Q8N9H9 656 aa16.39■□□□□ 0.21
USB1-202ENST00000423271 IQUBQ8NA54 791 aa16.39■□□□□ 0.21
USB1-202ENST00000423271 SHKBP1Q8TBC3 707 aa16.39■□□□□ 0.21
USB1-202ENST00000423271 SPATA32Q96LK8 384 aa16.39■□□□□ 0.21
USB1-202ENST00000423271 ASB16Q96NS5 453 aa16.39■□□□□ 0.21
USB1-202ENST00000423271 LRRC3Q9BY71 257 aa16.39■□□□□ 0.21
USB1-202ENST00000423271 ZCWPW1Q9H0M4 648 aa16.39■□□□□ 0.21
USB1-202ENST00000423271 TMEM206Q9H813 350 aa16.39■□□□□ 0.21
USB1-202ENST00000423271 PDE11AQ9HCR9 933 aa16.39■□□□□ 0.21
USB1-202ENST00000423271 ZNF334Q9HCZ1 680 aaPredicted RBP16.39■□□□□ 0.21
USB1-202ENST00000423271 NCANO14594 1321 aa16.39■□□□□ 0.21
USB1-202ENST00000423271 KPNA7A9QM74 516 aa16.38■□□□□ 0.21
USB1-202ENST00000423271 POLR2DO15514 142 aaKnown RBP16.38■□□□□ 0.21
USB1-202ENST00000423271 LDHAP00338 332 aaKnown RBP16.38■□□□□ 0.21
USB1-202ENST00000423271 ITGB3P05106 788 aa16.38■□□□□ 0.21
USB1-202ENST00000423271 STARD6P59095 220 aa16.38■□□□□ 0.21
USB1-202ENST00000423271 PLD1Q13393 1074 aa16.38■□□□□ 0.21
USB1-202ENST00000423271 GRM2Q14416 872 aa16.38■□□□□ 0.21
USB1-202ENST00000423271 ANGPT1Q15389 498 aa16.38■□□□□ 0.21
USB1-202ENST00000423271 SV2CQ496J9 727 aa16.38■□□□□ 0.21
USB1-202ENST00000423271 SLC44A4Q53GD3 710 aa16.38■□□□□ 0.21
USB1-202ENST00000423271 LMBRD2Q68DH5 695 aaPredicted RBP16.38■□□□□ 0.21
USB1-202ENST00000423271 METTL23Q86XA0 190 aa16.38■□□□□ 0.21
USB1-202ENST00000423271 GPD1LQ8N335 351 aa16.38■□□□□ 0.21
USB1-202ENST00000423271 CXorf38Q8TB03 319 aa16.38■□□□□ 0.21
USB1-202ENST00000423271 ELSPBP1Q96BH3 223 aa16.38■□□□□ 0.21
USB1-202ENST00000423271 ZNF560Q96MR9 790 aa16.38■□□□□ 0.21
USB1-202ENST00000423271 LRRC27Q9C0I9 530 aa16.38■□□□□ 0.21
USB1-202ENST00000423271 DLGAP2Q9P1A6 1054 aa16.38■□□□□ 0.21
USB1-202ENST00000423271 DSEQ9UL01 958 aa16.38■□□□□ 0.21
USB1-202ENST00000423271 AGAP1Q9UPQ3 857 aa16.38■□□□□ 0.21
USB1-202ENST00000423271 MIA3Q5JRA6 1907 aa16.38■□□□□ 0.21
USB1-202ENST00000423271 A0A1W2PRU2 124 aa16.37■□□□□ 0.21
USB1-202ENST00000423271 GLULP15104 373 aa16.37■□□□□ 0.21
USB1-202ENST00000423271 ALDH1A3P47895 512 aa16.37■□□□□ 0.21
USB1-202ENST00000423271 EPHB3P54753 998 aa16.37■□□□□ 0.21
USB1-202ENST00000423271 FAM26FQ5R3K3 315 aa16.37■□□□□ 0.21
USB1-202ENST00000423271 STXBP5Q5T5C0 1151 aa16.37■□□□□ 0.21
USB1-202ENST00000423271 RESP18Q5W5W9 173 aa16.37■□□□□ 0.21
USB1-202ENST00000423271 CNNM4Q6P4Q7 775 aa16.37■□□□□ 0.21
USB1-202ENST00000423271 STXBP4Q6ZWJ1 553 aa16.37■□□□□ 0.21
USB1-202ENST00000423271 EPM2AIP1Q7L775 607 aaPredicted RBP16.37■□□□□ 0.21
USB1-202ENST00000423271 LRRTM3Q86VH5 581 aa16.37■□□□□ 0.21
USB1-202ENST00000423271 CBWD2Q8IUF1 395 aa16.37■□□□□ 0.21
USB1-202ENST00000423271 LEMD2Q8NC56 503 aa16.37■□□□□ 0.21
USB1-202ENST00000423271 PJA1Q8NG27 643 aa16.37■□□□□ 0.21
USB1-202ENST00000423271 SEPT5Q99719 369 aaPredicted RBP16.37■□□□□ 0.21
USB1-202ENST00000423271 C7orf25Q9BPX7 421 aa16.37■□□□□ 0.21
USB1-202ENST00000423271 LPIN3Q9BQK8 851 aa16.37■□□□□ 0.21
USB1-202ENST00000423271 DDX23Q9BUQ8 820 aaKnown RBP16.37■□□□□ 0.21
USB1-202ENST00000423271 MTMR12Q9C0I1 747 aa16.37■□□□□ 0.21
USB1-202ENST00000423271 BLZF1Q9H2G9 400 aa16.37■□□□□ 0.21
USB1-202ENST00000423271 GDPD2Q9HCC8 539 aa16.37■□□□□ 0.21
USB1-202ENST00000423271 ZFP14Q9HCL3 533 aa16.37■□□□□ 0.21
USB1-202ENST00000423271 CHMP5Q9NZZ3 219 aa16.37■□□□□ 0.21
USB1-202ENST00000423271 SIX4Q9UIU6 781 aa16.37■□□□□ 0.21
USB1-202ENST00000423271 SIT1Q9Y3P8 196 aa16.37■□□□□ 0.21
USB1-202ENST00000423271 PTPRJQ12913 1337 aa16.37■□□□□ 0.21
USB1-202ENST00000423271 RIF1Q5UIP0 2472 aaKnown RBP16.37■□□□□ 0.21
USB1-202ENST00000423271 F5P12259 2224 aa16.37■□□□□ 0.21
USB1-202ENST00000423271 COL4A2P08572 1712 aa16.36■□□□□ 0.21
USB1-202ENST00000423271 CACNA1IQ9P0X4 2223 aa16.36■□□□□ 0.21
USB1-202ENST00000423271 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.36■□□□□ 0.21
USB1-202ENST00000423271 ATF6P18850 670 aa16.36■□□□□ 0.21
USB1-202ENST00000423271 CD72P21854 359 aa16.36■□□□□ 0.21
USB1-202ENST00000423271 NBL1P41271 181 aa16.36■□□□□ 0.21
USB1-202ENST00000423271 VIPR2P41587 438 aa16.36■□□□□ 0.21
USB1-202ENST00000423271 AMPD3Q01432 767 aa16.36■□□□□ 0.21
USB1-202ENST00000423271 PFKPQ01813 784 aa16.36■□□□□ 0.21
USB1-202ENST00000423271 BFSP1Q12934 665 aa16.36■□□□□ 0.21
USB1-202ENST00000423271 MGAT5BQ3V5L5 792 aa16.36■□□□□ 0.21
USB1-202ENST00000423271 VITQ6UXI7 678 aa16.36■□□□□ 0.21
USB1-202ENST00000423271 FRMD5Q7Z6J6 570 aa16.36■□□□□ 0.21
USB1-202ENST00000423271 GRAMD1CQ8IYS0 662 aa16.36■□□□□ 0.21
USB1-202ENST00000423271 THEM5Q8N1Q8 247 aa16.36■□□□□ 0.21
USB1-202ENST00000423271 ZSCAN18Q8TBC5 510 aaPredicted RBP16.36■□□□□ 0.21
USB1-202ENST00000423271 SMARCD2Q92925 531 aa16.36■□□□□ 0.21
USB1-202ENST00000423271 PSMG2Q969U7 264 aa16.36■□□□□ 0.21
USB1-202ENST00000423271 SHDQ96IW2 340 aa16.36■□□□□ 0.21
USB1-202ENST00000423271 SCAND2PQ9GZW5 306 aaPredicted RBP16.36■□□□□ 0.21
USB1-202ENST00000423271 SLITRK6Q9H5Y7 841 aa16.36■□□□□ 0.21
USB1-202ENST00000423271 HSPBP1Q9NZL4 362 aa16.36■□□□□ 0.21
USB1-202ENST00000423271 L1RE1Q9UN81 338 aa16.36■□□□□ 0.21
USB1-202ENST00000423271 MTF2Q9Y483 593 aaPredicted RBP16.36■□□□□ 0.21
USB1-202ENST00000423271 KANSL1LA0AUZ9 987 aa16.35■□□□□ 0.21
USB1-202ENST00000423271 PROB1E7EW31 1015 aa16.35■□□□□ 0.21
USB1-202ENST00000423271 EIF3DO15371 548 aaKnown RBP eCLIP16.35■□□□□ 0.21
USB1-202ENST00000423271 GFRA3O60609 400 aa16.35■□□□□ 0.21
USB1-202ENST00000423271 KRT19P08727 400 aa16.35■□□□□ 0.21
USB1-202ENST00000423271 PNPLA4P41247 253 aa16.35■□□□□ 0.21
USB1-202ENST00000423271 AFMP43652 599 aa16.35■□□□□ 0.21
USB1-202ENST00000423271 PRKCQQ04759 706 aa16.35■□□□□ 0.21
USB1-202ENST00000423271 EHHADHQ08426 723 aa16.35■□□□□ 0.21
USB1-202ENST00000423271 CUL4BQ13620 913 aa16.35■□□□□ 0.21
USB1-202ENST00000423271 TPRG1Q6ZUI0 275 aa16.35■□□□□ 0.21
USB1-202ENST00000423271 UNC13DQ70J99 1090 aa16.35■□□□□ 0.21
USB1-202ENST00000423271 GAREM2Q75VX8 874 aa16.35■□□□□ 0.21
USB1-202ENST00000423271 DNAJB7Q7Z6W7 309 aaPredicted RBP16.35■□□□□ 0.21
USB1-202ENST00000423271 NELFCDQ8IXH7 590 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms