RNA–Protein interactions for RNA: ENST00000422289.3

LONRF3-203, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 2 BASIC

Gene LONRF3, Length 2,898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-203ENST00000422289 CAPSQ13938 189 aa17.1■□□□□ 0.33
LONRF3-203ENST00000422289 SYCP2LQ5T4T6 812 aa17.1■□□□□ 0.33
LONRF3-203ENST00000422289 CGB2Q6NT52 195 aa17.1■□□□□ 0.33
LONRF3-203ENST00000422289 ANKRD35Q8N283 1001 aa17.1■□□□□ 0.33
LONRF3-203ENST00000422289 CKAP2Q8WWK9 683 aa17.1■□□□□ 0.33
LONRF3-203ENST00000422289 SLITRK1Q96PX8 696 aa17.1■□□□□ 0.33
LONRF3-203ENST00000422289 TEX13BQ9BXU2 312 aa17.1■□□□□ 0.33
LONRF3-203ENST00000422289 ZWILCHQ9H900 591 aa17.1■□□□□ 0.33
LONRF3-203ENST00000422289 KIAA1586Q9HCI6 787 aa17.1■□□□□ 0.33
LONRF3-203ENST00000422289 CNTNAP2Q9UHC6 1331 aa17.1■□□□□ 0.33
LONRF3-203ENST00000422289 A8MUI8 341 aa17.09■□□□□ 0.33
LONRF3-203ENST00000422289 LIASO43766 372 aa17.09■□□□□ 0.33
LONRF3-203ENST00000422289 GJB1P08034 283 aa17.09■□□□□ 0.33
LONRF3-203ENST00000422289 SYDE1Q6ZW31 735 aaPredicted RBP17.09■□□□□ 0.33
LONRF3-203ENST00000422289 SPATA21Q7Z572 469 aa17.09■□□□□ 0.33
LONRF3-203ENST00000422289 DEFB132Q7Z7B7 95 aa17.09■□□□□ 0.33
LONRF3-203ENST00000422289 TRIM50Q86XT4 487 aa17.09■□□□□ 0.33
LONRF3-203ENST00000422289 LRRC71Q8N4P6 559 aa17.09■□□□□ 0.33
LONRF3-203ENST00000422289 EXD1Q8NHP7 514 aa17.09■□□□□ 0.33
LONRF3-203ENST00000422289 PRCCQ92733 491 aaPredicted RBP17.09■□□□□ 0.33
LONRF3-203ENST00000422289 N4BP2L2Q92802 583 aaPredicted RBP17.09■□□□□ 0.33
LONRF3-203ENST00000422289 NKIRAS1Q9NYS0 192 aa17.09■□□□□ 0.33
LONRF3-203ENST00000422289 A0A0B4J269 797 aa17.09■□□□□ 0.33
LONRF3-203ENST00000422289 MAFGO15525 162 aa17.09■□□□□ 0.33
LONRF3-203ENST00000422289 CDH16O75309 829 aa17.09■□□□□ 0.33
LONRF3-203ENST00000422289 SKAP2O75563 359 aaPredicted RBP17.09■□□□□ 0.33
LONRF3-203ENST00000422289 ATP5DP30049 168 aa17.09■□□□□ 0.33
LONRF3-203ENST00000422289 TFAMQ00059 246 aaKnown RBP17.09■□□□□ 0.33
LONRF3-203ENST00000422289 GPAT2Q6NUI2 795 aa17.09■□□□□ 0.33
LONRF3-203ENST00000422289 DNAJC24Q6P3W2 148 aa17.09■□□□□ 0.33
LONRF3-203ENST00000422289 ZBED8Q8IZ13 594 aa17.09■□□□□ 0.33
LONRF3-203ENST00000422289 FITM2Q8N6M3 262 aa17.09■□□□□ 0.33
LONRF3-203ENST00000422289 CGRRF1Q99675 332 aa17.09■□□□□ 0.33
LONRF3-203ENST00000422289 L3MBTL1Q9Y468 752 aa17.09■□□□□ 0.33
LONRF3-203ENST00000422289 SGK1O00141 431 aa17.08■□□□□ 0.33
LONRF3-203ENST00000422289 SUN1O94901 812 aa17.08■□□□□ 0.33
LONRF3-203ENST00000422289 ATP6V1G2O95670 118 aa17.08■□□□□ 0.33
LONRF3-203ENST00000422289 NRLP54845 237 aa17.08■□□□□ 0.33
LONRF3-203ENST00000422289 RTP1P59025 263 aa17.08■□□□□ 0.33
LONRF3-203ENST00000422289 DNAJC3Q13217 504 aa17.08■□□□□ 0.33
LONRF3-203ENST00000422289 PHF13Q86YI8 300 aaPredicted RBP17.08■□□□□ 0.33
LONRF3-203ENST00000422289 TFAP2BQ92481 460 aa17.08■□□□□ 0.33
LONRF3-203ENST00000422289 IMPG2Q9BZV3 1241 aa17.08■□□□□ 0.33
LONRF3-203ENST00000422289 DHX33Q9H6R0 707 aaKnown RBP17.08■□□□□ 0.33
LONRF3-203ENST00000422289 SLCO1B3Q9NPD5 702 aa17.08■□□□□ 0.33
LONRF3-203ENST00000422289 NXF1Q9UBU9 619 aaKnown RBP17.08■□□□□ 0.33
LONRF3-203ENST00000422289 SCINQ9Y6U3 715 aa17.08■□□□□ 0.33
LONRF3-203ENST00000422289 KRT15P19012 456 aa17.08■□□□□ 0.32
LONRF3-203ENST00000422289 MMP8P22894 467 aa17.08■□□□□ 0.32
LONRF3-203ENST00000422289 RXRBP28702 533 aa17.08■□□□□ 0.32
LONRF3-203ENST00000422289 RAP1GAPP47736 663 aa17.08■□□□□ 0.32
LONRF3-203ENST00000422289 WDR4P57081 412 aaKnown RBP17.08■□□□□ 0.32
LONRF3-203ENST00000422289 NCALDP61601 193 aa17.08■□□□□ 0.32
LONRF3-203ENST00000422289 PKN2Q16513 984 aaKnown RBP17.08■□□□□ 0.32
LONRF3-203ENST00000422289 ANGEL2Q5VTE6 544 aaKnown RBP17.08■□□□□ 0.32
LONRF3-203ENST00000422289 XRRA1Q6P2D8 792 aa17.08■□□□□ 0.32
LONRF3-203ENST00000422289 THNSL1Q8IYQ7 743 aa17.08■□□□□ 0.32
LONRF3-203ENST00000422289 P3H4Q92791 437 aa17.08■□□□□ 0.32
LONRF3-203ENST00000422289 CAMKK2Q96RR4 588 aa17.08■□□□□ 0.32
LONRF3-203ENST00000422289 NOD2Q9HC29 1040 aa17.08■□□□□ 0.32
LONRF3-203ENST00000422289 IGF2BP3O00425 579 aaKnown RBP eCLIP17.07■□□□□ 0.32
LONRF3-203ENST00000422289 OAS1P00973 400 aaKnown RBP17.07■□□□□ 0.32
LONRF3-203ENST00000422289 NAMPTP43490 491 aa17.07■□□□□ 0.32
LONRF3-203ENST00000422289 TGFB2P61812 414 aa17.07■□□□□ 0.32
LONRF3-203ENST00000422289 SATB1Q01826 763 aa17.07■□□□□ 0.32
LONRF3-203ENST00000422289 CAV1Q03135 178 aa17.07■□□□□ 0.32
LONRF3-203ENST00000422289 MGAT5Q09328 741 aa17.07■□□□□ 0.32
LONRF3-203ENST00000422289 CEP120Q8N960 986 aa17.07■□□□□ 0.32
LONRF3-203ENST00000422289 PRPF31Q8WWY3 499 aaKnown RBP17.07■□□□□ 0.32
LONRF3-203ENST00000422289 R3HDMLQ9H3Y0 253 aa17.07■□□□□ 0.32
LONRF3-203ENST00000422289 CISHQ9NSE2 258 aa17.07■□□□□ 0.32
LONRF3-203ENST00000422289 IP6K2Q9UHH9 426 aa17.07■□□□□ 0.32
LONRF3-203ENST00000422289 TMEM191CA6NGB0 347 aa17.07■□□□□ 0.32
LONRF3-203ENST00000422289 ITGBL1O95965 494 aaPredicted RBP17.07■□□□□ 0.32
LONRF3-203ENST00000422289 RPSAP08865 295 aaKnown RBP17.07■□□□□ 0.32
LONRF3-203ENST00000422289 TMEM191BP0C7N4 346 aa17.07■□□□□ 0.32
LONRF3-203ENST00000422289 CD19P15391 556 aa17.07■□□□□ 0.32
LONRF3-203ENST00000422289 GCAP28676 217 aa17.07■□□□□ 0.32
LONRF3-203ENST00000422289 ARL2P36404 184 aa17.07■□□□□ 0.32
LONRF3-203ENST00000422289 EFTUD2Q15029 972 aaKnown RBP eCLIP17.07■□□□□ 0.322e-6■■■■□ 21.7
LONRF3-203ENST00000422289 STXBP2Q15833 593 aa17.07■□□□□ 0.32
LONRF3-203ENST00000422289 SPOCD1Q6ZMY3 1216 aa17.07■□□□□ 0.32
LONRF3-203ENST00000422289 DPH6Q7L8W6 267 aa17.07■□□□□ 0.32
LONRF3-203ENST00000422289 EMC1Q8N766 993 aa17.07■□□□□ 0.32
LONRF3-203ENST00000422289 CCDC77Q9BR77 488 aa17.07■□□□□ 0.32
LONRF3-203ENST00000422289 C12orf65Q9H3J6 166 aaKnown RBP17.07■□□□□ 0.32
LONRF3-203ENST00000422289 STYXL1Q9Y6J8 313 aa17.07■□□□□ 0.32
LONRF3-203ENST00000422289 ARID2Q68CP9 1835 aa17.07■□□□□ 0.32
LONRF3-203ENST00000422289 MGRN1O60291 552 aa17.07■□□□□ 0.32
LONRF3-203ENST00000422289 C1QBPQ07021 282 aaKnown RBP17.07■□□□□ 0.32
LONRF3-203ENST00000422289 NAIF1Q69YI7 327 aaPredicted RBP17.07■□□□□ 0.32
LONRF3-203ENST00000422289 ZCCHC9Q8N567 271 aaKnown RBP17.07■□□□□ 0.32
LONRF3-203ENST00000422289 CDHR1Q96JP9 859 aa17.07■□□□□ 0.32
LONRF3-203ENST00000422289 PCYT2Q99447 389 aa17.07■□□□□ 0.32
LONRF3-203ENST00000422289 MAFBQ9Y5Q3 323 aaPredicted RBP17.07■□□□□ 0.32
LONRF3-203ENST00000422289 NFASCO94856 1347 aa17.06■□□□□ 0.32
LONRF3-203ENST00000422289 A0A1W2PPM1 405 aa17.06■□□□□ 0.32
LONRF3-203ENST00000422289 SPDYE16A6NNV3 312 aaPredicted RBP17.06■□□□□ 0.32
LONRF3-203ENST00000422289 H0YCG3 227 aa17.06■□□□□ 0.32
LONRF3-203ENST00000422289 CSDE1O75534 798 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms