RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 ANKRD42Q8N9B4 389 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 SLAIN1Q8ND83 568 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 FAM76AQ8TAV0 307 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 RABGGTAQ92696 567 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 TATDN2Q93075 761 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 PBKQ96KB5 322 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 DNAJC17Q9NVM6 304 aaKnown RBP10.28□□□□□ -0.76
CMSS1-201ENST00000421999 GPR25O00155 361 aa10.27□□□□□ -0.76
CMSS1-201ENST00000421999 NCK2O43639 380 aa10.27□□□□□ -0.76
CMSS1-201ENST00000421999 SULT1E1P49888 294 aa10.27□□□□□ -0.76
CMSS1-201ENST00000421999 PPP3CAQ08209 521 aa10.27□□□□□ -0.76
CMSS1-201ENST00000421999 FAM171A1Q5VUB5 890 aa10.27□□□□□ -0.76
CMSS1-201ENST00000421999 CST9Q5W186 159 aa10.27□□□□□ -0.76
CMSS1-201ENST00000421999 CROCCP2Q86T23 111 aa10.27□□□□□ -0.76
CMSS1-201ENST00000421999 ZNF410Q86VK4 478 aa10.27□□□□□ -0.76
CMSS1-201ENST00000421999 CYP4F11Q9HBI6 524 aa10.27□□□□□ -0.76
CMSS1-201ENST00000421999 A0A087X0T9 212 aa10.27□□□□□ -0.77
CMSS1-201ENST00000421999 INHBAP08476 426 aa10.27□□□□□ -0.77
CMSS1-201ENST00000421999 HOXC6P09630 235 aa10.27□□□□□ -0.77
CMSS1-201ENST00000421999 FAM228BP0C875 321 aa10.27□□□□□ -0.77
CMSS1-201ENST00000421999 NCAM1P13591 858 aa10.27□□□□□ -0.77
CMSS1-201ENST00000421999 APLP1P51693 650 aa10.27□□□□□ -0.77
CMSS1-201ENST00000421999 CUL2Q13617 745 aa10.27□□□□□ -0.77
CMSS1-201ENST00000421999 THOC5Q13769 683 aaKnown RBP10.27□□□□□ -0.77
CMSS1-201ENST00000421999 SNX17Q15036 470 aa10.27□□□□□ -0.77
CMSS1-201ENST00000421999 GOLGA7BQ2TAP0 167 aa10.27□□□□□ -0.77
CMSS1-201ENST00000421999 EEF1DP3Q658K8 133 aa10.27□□□□□ -0.77
CMSS1-201ENST00000421999 MCUQ8NE86 351 aa10.27□□□□□ -0.77
CMSS1-201ENST00000421999 MGARPQ8TDB4 240 aa10.27□□□□□ -0.77
CMSS1-201ENST00000421999 MRPS31Q92665 395 aaKnown RBP10.27□□□□□ -0.77
CMSS1-201ENST00000421999 SMC6Q96SB8 1091 aa10.27□□□□□ -0.77
CMSS1-201ENST00000421999 FSD1LQ9BXM9 530 aa10.27□□□□□ -0.77
CMSS1-201ENST00000421999 DHX33Q9H6R0 707 aaKnown RBP10.27□□□□□ -0.77
CMSS1-201ENST00000421999 PLEKHA5Q9HAU0 1116 aa10.27□□□□□ -0.77
CMSS1-201ENST00000421999 EPB41L5Q9HCM4 733 aa10.27□□□□□ -0.77
CMSS1-201ENST00000421999 HOMER3Q9NSC5 361 aa10.27□□□□□ -0.77
CMSS1-201ENST00000421999 MORF4L1Q9UBU8 362 aa10.27□□□□□ -0.77
CMSS1-201ENST00000421999 GOLGA8CPA6NN73 597 aa10.27□□□□□ -0.77
CMSS1-201ENST00000421999 DUSP11O75319 330 aaKnown RBP10.27□□□□□ -0.77
CMSS1-201ENST00000421999 INHAP05111 366 aa10.27□□□□□ -0.77
CMSS1-201ENST00000421999 ASGR1P07306 291 aa10.27□□□□□ -0.77
CMSS1-201ENST00000421999 ADRB2P07550 413 aa10.27□□□□□ -0.77
CMSS1-201ENST00000421999 PTENP60484 403 aa10.27□□□□□ -0.77
CMSS1-201ENST00000421999 MRPS25P82663 173 aaKnown RBP10.27□□□□□ -0.77
CMSS1-201ENST00000421999 CEP85LQ5SZL2 805 aa10.27□□□□□ -0.77
CMSS1-201ENST00000421999 RAPH1Q70E73 1250 aa10.27□□□□□ -0.77
CMSS1-201ENST00000421999 IRF2BP1Q8IU81 584 aa10.27□□□□□ -0.77
CMSS1-201ENST00000421999 PDIK1LQ8N165 341 aa10.27□□□□□ -0.77
CMSS1-201ENST00000421999 CEP120Q8N960 986 aa10.27□□□□□ -0.77
CMSS1-201ENST00000421999 ASIC4Q96FT7 647 aa10.27□□□□□ -0.77
CMSS1-201ENST00000421999 DDX27Q96GQ7 796 aaKnown RBP10.27□□□□□ -0.77
CMSS1-201ENST00000421999 WDR24Q96S15 920 aa10.27□□□□□ -0.77
CMSS1-201ENST00000421999 TMEM134Q9H6X4 195 aa10.27□□□□□ -0.77
CMSS1-201ENST00000421999 SUDS3Q9H7L9 328 aaPredicted RBP10.27□□□□□ -0.77
CMSS1-201ENST00000421999 XPNPEP1Q9NQW7 623 aa10.27□□□□□ -0.77
CMSS1-201ENST00000421999 WDR35Q9P2L0 1181 aa10.27□□□□□ -0.77
CMSS1-201ENST00000421999 H3BRJ5 948 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 H7C4K7 107 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 RECQL4O94761 1208 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 SLC10A3P09131 477 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 MCF2P10911 925 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 TPI1P60174 286 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 COG7P83436 770 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 YWHAHQ04917 246 aaPredicted RBP10.26□□□□□ -0.77
CMSS1-201ENST00000421999 DEUP1Q05D60 604 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 OVOS1Q6IE37 1185 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 DDX53Q86TM3 631 aaKnown RBP10.26□□□□□ -0.77
CMSS1-201ENST00000421999 NOP9Q86U38 636 aaKnown RBP10.26□□□□□ -0.77
CMSS1-201ENST00000421999 CHSY1Q86X52 802 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 RHOT1Q8IXI2 618 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 ADGRF2Q8IZF7 708 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 DCLK2Q8N568 766 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 SLC7A14Q8TBB6 771 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 RFFLQ8WZ73 363 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 PGLYRP2Q96PD5 576 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 HIPK3Q9H422 1215 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 LRRIQ3A6PVS8 624 aaPredicted RBP10.26□□□□□ -0.77
CMSS1-201ENST00000421999 PI4K2BG5E9Z4 385 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 TREHO43280 583 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 CAPN2P17655 700 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 NCKAP1LP55160 1127 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 ST8SIA6P61647 398 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 ZNF235Q14590 738 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 NFE2Q16621 373 aaPredicted RBP10.26□□□□□ -0.77
CMSS1-201ENST00000421999 C2CD6Q53TS8 623 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 TDRD10Q5VZ19 366 aaKnown RBP10.26□□□□□ -0.77
CMSS1-201ENST00000421999 WDR49Q8IV35 697 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 MSL3Q8N5Y2 521 aaKnown RBP10.26□□□□□ -0.77
CMSS1-201ENST00000421999 CYFIP2Q96F07 1278 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 DDX50Q9BQ39 737 aaKnown RBP10.26□□□□□ -0.77
CMSS1-201ENST00000421999 NIFKQ9BYG3 293 aaKnown RBP10.26□□□□□ -0.77
CMSS1-201ENST00000421999 DYRK4Q9NR20 520 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 ABCF3Q9NUQ8 709 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 INTS13Q9NVM9 706 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 TTC7AQ9ULT0 858 aaPredicted RBP10.26□□□□□ -0.77
CMSS1-201ENST00000421999 ADAMTS5Q9UNA0 930 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 TLL2Q9Y6L7 1015 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 ZNF831Q5JPB2 1677 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 LACTBL1A8MY62 500 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 SGPL1O95470 568 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms