RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 LONRF1Q17RB8 773 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 JADE1Q6IE81 842 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 KCNV1Q6PIU1 500 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 B4GALNT4Q76KP1 1039 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 UBA3Q8TBC4 463 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 ADAM33Q9BZ11 813 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 MROH8Q9H579 483 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 SMYD3Q9H7B4 428 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 ANAPC5Q9UJX4 755 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 SCINQ9Y6U3 715 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 BRCA1P38398 1863 aaKnown RBP11.6□□□□□ -0.55
DDX56-203ENST00000421223 CCL15-CCL14A0A0B4J2E2 113 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 ATP2C2O75185 946 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 ZSCAN5DPP0CG00 497 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 ETS1P14921 441 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 SLC1A1P43005 524 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 MCL1Q07820 350 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 CCL15Q16663 113 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 KIZQ2M2Z5 673 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 PRAMEF19Q5SWL8 479 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 RNF187Q5TA31 235 aaPredicted RBP11.6□□□□□ -0.55
DDX56-203ENST00000421223 CYP4F22Q6NT55 531 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 CHADLQ6NUI6 762 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 MFSD7Q6UXD7 560 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 TRIM72Q6ZMU5 477 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 PLPPR4Q7Z2D5 763 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 ARFGAP2Q8N6H7 521 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 SEC14L1Q92503 715 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 UPF1Q92900 1129 aaKnown RBP eCLIP11.6□□□□□ -0.55
DDX56-203ENST00000421223 HEXIM2Q96MH2 286 aaKnown RBP11.6□□□□□ -0.55
DDX56-203ENST00000421223 MLXIPLQ9NP71 852 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 HMGXB4Q9UGU5 601 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 AGAP1Q9UPQ3 857 aa11.6□□□□□ -0.55
DDX56-203ENST00000421223 PARP14Q460N5 1801 aa11.59□□□□□ -0.55
DDX56-203ENST00000421223 CEP350Q5VT06 3117 aa11.59□□□□□ -0.55
DDX56-203ENST00000421223 GRAP2O75791 330 aa11.59□□□□□ -0.55
DDX56-203ENST00000421223 MMP8P22894 467 aa11.59□□□□□ -0.55
DDX56-203ENST00000421223 PSEN1P49768 467 aa11.59□□□□□ -0.55
DDX56-203ENST00000421223 PSMC1P62191 440 aaKnown RBP11.59□□□□□ -0.55
DDX56-203ENST00000421223 PPP2R2AP63151 447 aa11.59□□□□□ -0.55
DDX56-203ENST00000421223 SKOR1P84550 965 aa11.59□□□□□ -0.55
DDX56-203ENST00000421223 EIF1ADQ8N9N8 165 aaKnown RBP11.59□□□□□ -0.55
DDX56-203ENST00000421223 C9orf72Q96LT7 481 aa11.59□□□□□ -0.55
DDX56-203ENST00000421223 DCLK3Q9C098 648 aa11.59□□□□□ -0.55
DDX56-203ENST00000421223 PARP2Q9UGN5 583 aa11.59□□□□□ -0.55
DDX56-203ENST00000421223 ASB14A6NK59 587 aa11.59□□□□□ -0.55
DDX56-203ENST00000421223 FAM189A1O60320 539 aa11.59□□□□□ -0.55
DDX56-203ENST00000421223 PSMA2P25787 234 aa11.59□□□□□ -0.55
DDX56-203ENST00000421223 POLR2BP30876 1174 aaKnown RBP11.59□□□□□ -0.55
DDX56-203ENST00000421223 RFC1P35251 1148 aaPredicted RBP11.59□□□□□ -0.55
DDX56-203ENST00000421223 PHKA2P46019 1235 aa11.59□□□□□ -0.55
DDX56-203ENST00000421223 OGDHQ02218 1023 aa11.59□□□□□ -0.55
DDX56-203ENST00000421223 MBTD1Q05BQ5 628 aa11.59□□□□□ -0.55
DDX56-203ENST00000421223 NFX1Q12986 1120 aaKnown RBP11.59□□□□□ -0.55
DDX56-203ENST00000421223 TCEAL1Q15170 157 aa11.59□□□□□ -0.55
DDX56-203ENST00000421223 JPH2Q9BR39 696 aaPredicted RBP11.59□□□□□ -0.55
DDX56-203ENST00000421223 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.59□□□□□ -0.55
DDX56-203ENST00000421223 IP6K2Q9UHH9 426 aa11.59□□□□□ -0.55
DDX56-203ENST00000421223 KCNH4Q9UQ05 1017 aa11.59□□□□□ -0.55
DDX56-203ENST00000421223 DNAJC25-GNG10A0A024R161 153 aa11.58□□□□□ -0.56
DDX56-203ENST00000421223 H3BRB1 525 aa11.58□□□□□ -0.56
DDX56-203ENST00000421223 GOLGA8MH3BSY2 632 aa11.58□□□□□ -0.56
DDX56-203ENST00000421223 LGR5O75473 907 aa11.58□□□□□ -0.56
DDX56-203ENST00000421223 FNTAP49354 379 aa11.58□□□□□ -0.56
DDX56-203ENST00000421223 MOGSQ13724 837 aa11.58□□□□□ -0.56
DDX56-203ENST00000421223 GLRA4Q5JXX5 417 aa11.58□□□□□ -0.56
DDX56-203ENST00000421223 PLEKHA7Q6IQ23 1121 aa11.58□□□□□ -0.56
DDX56-203ENST00000421223 HOOK3Q86VS8 718 aa11.58□□□□□ -0.56
DDX56-203ENST00000421223 PHF13Q86YI8 300 aaPredicted RBP11.58□□□□□ -0.56
DDX56-203ENST00000421223 WDTC1Q8N5D0 677 aa11.58□□□□□ -0.56
DDX56-203ENST00000421223 C1orf127Q8N9H9 656 aa11.58□□□□□ -0.56
DDX56-203ENST00000421223 ATL2Q8NHH9 583 aa11.58□□□□□ -0.56
DDX56-203ENST00000421223 RAPGEF5Q92565 580 aa11.58□□□□□ -0.56
DDX56-203ENST00000421223 TWNKQ96RR1 684 aa11.58□□□□□ -0.56
DDX56-203ENST00000421223 CCT8L2Q96SF2 557 aa11.58□□□□□ -0.56
DDX56-203ENST00000421223 TUT1Q9H6E5 874 aaKnown RBP11.58□□□□□ -0.56
DDX56-203ENST00000421223 LRRC19Q9H756 370 aa11.58□□□□□ -0.56
DDX56-203ENST00000421223 SETD4Q9NVD3 440 aa11.58□□□□□ -0.56
DDX56-203ENST00000421223 HES2Q9Y543 173 aa11.58□□□□□ -0.56
DDX56-203ENST00000421223 RASGRF2O14827 1237 aa11.58□□□□□ -0.56
DDX56-203ENST00000421223 KRT3P12035 628 aa11.58□□□□□ -0.56
DDX56-203ENST00000421223 ARF4P18085 180 aaPredicted RBP11.58□□□□□ -0.56
DDX56-203ENST00000421223 CCNA1P78396 465 aa11.58□□□□□ -0.56
DDX56-203ENST00000421223 C1QBPQ07021 282 aaKnown RBP11.58□□□□□ -0.56
DDX56-203ENST00000421223 ARHGAP1Q07960 439 aa11.58□□□□□ -0.56
DDX56-203ENST00000421223 PTGISQ16647 500 aa11.58□□□□□ -0.56
DDX56-203ENST00000421223 CDO1Q16878 200 aa11.58□□□□□ -0.56
DDX56-203ENST00000421223 TSHZ1Q6ZSZ6 1077 aa11.58□□□□□ -0.56
DDX56-203ENST00000421223 KIAA0319LQ8IZA0 1049 aa11.58□□□□□ -0.56
DDX56-203ENST00000421223 JOSD2Q8TAC2 188 aa11.58□□□□□ -0.56
DDX56-203ENST00000421223 CDC42EP4Q9H3Q1 356 aaKnown RBP11.58□□□□□ -0.56
DDX56-203ENST00000421223 FZD8Q9H461 694 aa11.58□□□□□ -0.56
DDX56-203ENST00000421223 IFT122Q9HBG6 1241 aa11.58□□□□□ -0.56
DDX56-203ENST00000421223 BTBD19C9JJ37 291 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 C22orf31O95567 290 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 GH1P01241 217 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 CALB1P05937 261 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 ASPAP45381 313 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 LIG3P49916 1009 aa11.57□□□□□ -0.56
DDX56-203ENST00000421223 PTP4A2Q12974 167 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms