RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 ASNSP08243 561 aa12.89□□□□□ -0.35
CLCN4-203ENST00000421085 RECQLP46063 649 aaPredicted RBP12.89□□□□□ -0.35
CLCN4-203ENST00000421085 ACOT2P49753 483 aa12.89□□□□□ -0.35
CLCN4-203ENST00000421085 HSD17B4P51659 736 aa12.89□□□□□ -0.35
CLCN4-203ENST00000421085 OTUD4Q01804 1114 aaKnown RBP12.89□□□□□ -0.35
CLCN4-203ENST00000421085 ZNF235Q14590 738 aa12.89□□□□□ -0.35
CLCN4-203ENST00000421085 ELOA2Q8IYF1 753 aaPredicted RBP12.89□□□□□ -0.35
CLCN4-203ENST00000421085 LRRN4CLQ8ND94 238 aa12.89□□□□□ -0.35
CLCN4-203ENST00000421085 FLAD1Q8NFF5 587 aa12.89□□□□□ -0.35
CLCN4-203ENST00000421085 NSUN6Q8TEA1 469 aaKnown RBP12.89□□□□□ -0.35
CLCN4-203ENST00000421085 GLMNQ92990 594 aa12.89□□□□□ -0.35
CLCN4-203ENST00000421085 WDR35Q9P2L0 1181 aa12.89□□□□□ -0.35
CLCN4-203ENST00000421085 PRLRP16471 622 aa12.89□□□□□ -0.35
CLCN4-203ENST00000421085 PTPN4P29074 926 aa12.89□□□□□ -0.35
CLCN4-203ENST00000421085 HERVK_113P62684 666 aa12.89□□□□□ -0.35
CLCN4-203ENST00000421085 TMED8Q6PL24 325 aaPredicted RBP12.89□□□□□ -0.35
CLCN4-203ENST00000421085 FAM196AQ6ZSG2 479 aa12.89□□□□□ -0.35
CLCN4-203ENST00000421085 ARHGAP22Q7Z5H3 698 aa12.89□□□□□ -0.35
CLCN4-203ENST00000421085 PHF21AQ96BD5 680 aa12.89□□□□□ -0.35
CLCN4-203ENST00000421085 MAGI3Q5TCQ9 1506 aa12.89□□□□□ -0.35
CLCN4-203ENST00000421085 ERBB3P21860 1342 aa12.89□□□□□ -0.35
CLCN4-203ENST00000421085 ZNF335Q9H4Z2 1342 aaPredicted RBP12.89□□□□□ -0.35
CLCN4-203ENST00000421085 F5H6K3 240 aa12.89□□□□□ -0.35
CLCN4-203ENST00000421085 RAB14P61106 215 aa12.89□□□□□ -0.35
CLCN4-203ENST00000421085 FOXO4P98177 505 aa12.89□□□□□ -0.35
CLCN4-203ENST00000421085 KLRC3Q07444 240 aa12.89□□□□□ -0.35
CLCN4-203ENST00000421085 ZC2HC1CQ53FD0 456 aaPredicted RBP12.89□□□□□ -0.35
CLCN4-203ENST00000421085 SRP68Q9UHB9 627 aaKnown RBP12.89□□□□□ -0.35
CLCN4-203ENST00000421085 MOSPD1Q9UJG1 213 aa12.89□□□□□ -0.35
CLCN4-203ENST00000421085 SUPT3HB4E1H0 165 aa12.89□□□□□ -0.35
CLCN4-203ENST00000421085 TWF2Q6IBS0 349 aaKnown RBP12.89□□□□□ -0.35
CLCN4-203ENST00000421085 KIF12Q96FN5 646 aa12.89□□□□□ -0.35
CLCN4-203ENST00000421085 CNGB3Q9NQW8 809 aa12.89□□□□□ -0.35
CLCN4-203ENST00000421085 DMGDHQ9UI17 866 aaKnown RBP12.89□□□□□ -0.35
CLCN4-203ENST00000421085 PRDM4Q9UKN5 801 aa12.89□□□□□ -0.35
CLCN4-203ENST00000421085 DISP1Q96F81 1524 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 C5orf58C9J3I9 102 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 TFE3P19532 575 aaPredicted RBP12.88□□□□□ -0.35
CLCN4-203ENST00000421085 SUPT20HL1Q3ZLR7 823 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 AARS2Q5JTZ9 985 aaKnown RBP12.88□□□□□ -0.35
CLCN4-203ENST00000421085 RNF219Q5W0B1 726 aaPredicted RBP12.88□□□□□ -0.35
CLCN4-203ENST00000421085 CAVIN3Q969G5 261 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 ZSWIM1Q9BR11 485 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 TMEM120AQ9BXJ8 343 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 TMEM51Q9NW97 253 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 PLAGL2Q9UPG8 496 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 ZNF197O14709 1029 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 RGS5O15539 181 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 SMNDC1O75940 238 aaKnown RBP eCLIP12.88□□□□□ -0.35
CLCN4-203ENST00000421085 FLCNQ8NFG4 579 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 SH2D3AQ9BRG2 576 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 LINC00854A0A1B0GVQ3 168 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 PSMD3O43242 534 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 CD44P16070 742 aaKnown RBP12.88□□□□□ -0.35
CLCN4-203ENST00000421085 FUT11Q495W5 492 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 THEMIS2Q5TEJ8 643 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 SNRNP48Q6IEG0 339 aaKnown RBP12.88□□□□□ -0.35
CLCN4-203ENST00000421085 SHCBP1Q8NEM2 672 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 RIN3Q8TB24 985 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 USE1Q9NZ43 259 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 UGGT1Q9NYU2 1555 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 A0A087X0T9 212 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 TRPC5OSA6NMA1 111 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 RASSF9O75901 435 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 FAM228BP0C875 321 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 RBP3P10745 1247 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 THRAP10827 490 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 CDK17Q00537 523 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 STX5Q13190 355 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 TRIM25Q14258 630 aaKnown RBP12.88□□□□□ -0.35
CLCN4-203ENST00000421085 MTERF3Q96E29 417 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 TAGLN3Q9UI15 199 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 RARGP13631 454 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 R3HDM1Q15032 1099 aaKnown RBP12.88□□□□□ -0.35
CLCN4-203ENST00000421085 RASA2Q15283 850 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 EPC2Q52LR7 807 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 ATG4AQ8WYN0 398 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 ABHD8Q96I13 439 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 ILKAPQ9H0C8 392 aaPredicted RBP12.88□□□□□ -0.35
CLCN4-203ENST00000421085 VPS33BQ9H267 617 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 SLC39A10Q9ULF5 831 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 C15orf41Q9Y2V0 281 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 TAF6LQ9Y6J9 622 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 RNF103O00237 685 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 GRAP2O75791 330 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 ZNF23P17027 643 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 NCOA4Q13772 614 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 SH3KBP1Q96B97 665 aa12.88□□□□□ -0.35
CLCN4-203ENST00000421085 ACSF2Q96CM8 615 aaPredicted RBP12.88□□□□□ -0.35
CLCN4-203ENST00000421085 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.88□□□□□ -0.35
CLCN4-203ENST00000421085 GLI1P08151 1106 aa12.87□□□□□ -0.35
CLCN4-203ENST00000421085 FAM200BP0CF97 657 aa12.87□□□□□ -0.35
CLCN4-203ENST00000421085 ANTXR2P58335 489 aa12.87□□□□□ -0.35
CLCN4-203ENST00000421085 TMC5Q6UXY8 1006 aa12.87□□□□□ -0.35
CLCN4-203ENST00000421085 MFN1Q8IWA4 741 aa12.87□□□□□ -0.35
CLCN4-203ENST00000421085 RSAD1Q9HA92 442 aa12.87□□□□□ -0.35
CLCN4-203ENST00000421085 SPDYE5A6NIY4 337 aa12.87□□□□□ -0.35
CLCN4-203ENST00000421085 SPDYE7PQ495Y7 208 aa12.87□□□□□ -0.35
CLCN4-203ENST00000421085 TTC23LQ6PF05 361 aa12.87□□□□□ -0.35
CLCN4-203ENST00000421085 BNC2Q6ZN30 1099 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms