RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 MAGEA9P43362 315 aa17.13■□□□□ 0.33
CTSB-203ENST00000420692 RAP1GAPP47736 663 aa17.13■□□□□ 0.33
CTSB-203ENST00000420692 VPS41P49754 854 aa17.13■□□□□ 0.33
CTSB-203ENST00000420692 NFX1Q12986 1120 aaKnown RBP17.13■□□□□ 0.33
CTSB-203ENST00000420692 TRPC3Q13507 836 aa17.13■□□□□ 0.33
CTSB-203ENST00000420692 SURF1Q15526 300 aa17.13■□□□□ 0.33
CTSB-203ENST00000420692 ZNF699Q32M78 642 aa17.13■□□□□ 0.33
CTSB-203ENST00000420692 C6orf118Q5T5N4 469 aa17.13■□□□□ 0.33
CTSB-203ENST00000420692 CYP4A22Q5TCH4 519 aa17.13■□□□□ 0.33
CTSB-203ENST00000420692 MAMDC4Q6UXC1 1216 aa17.13■□□□□ 0.33
CTSB-203ENST00000420692 TRMT10CQ7L0Y3 403 aaKnown RBP17.13■□□□□ 0.33
CTSB-203ENST00000420692 GLIS1Q8NBF1 620 aa17.13■□□□□ 0.33
CTSB-203ENST00000420692 CXorf38Q8TB03 319 aa17.13■□□□□ 0.33
CTSB-203ENST00000420692 SLITRK1Q96PX8 696 aa17.13■□□□□ 0.33
CTSB-203ENST00000420692 SDCBP2Q9H190 292 aa17.13■□□□□ 0.33
CTSB-203ENST00000420692 EFCC1Q9HA90 598 aa17.13■□□□□ 0.33
CTSB-203ENST00000420692 HBP1O60381 514 aa17.12■□□□□ 0.33
CTSB-203ENST00000420692 CALB1P05937 261 aa17.12■□□□□ 0.33
CTSB-203ENST00000420692 CDH8P55286 799 aa17.12■□□□□ 0.33
CTSB-203ENST00000420692 ARHGAP1Q07960 439 aa17.12■□□□□ 0.33
CTSB-203ENST00000420692 AMHR2Q16671 573 aa17.12■□□□□ 0.33
CTSB-203ENST00000420692 ERMARDQ5T6L9 678 aa17.12■□□□□ 0.33
CTSB-203ENST00000420692 WDR78Q5VTH9 848 aa17.12■□□□□ 0.33
CTSB-203ENST00000420692 PPP1R2P3Q6NXS1 205 aa17.12■□□□□ 0.33
CTSB-203ENST00000420692 C6orf89Q6UWU4 347 aa17.12■□□□□ 0.33
CTSB-203ENST00000420692 B4GALNT4Q76KP1 1039 aa17.12■□□□□ 0.33
CTSB-203ENST00000420692 ATXN2LQ8WWM7 1075 aaKnown RBP17.12■□□□□ 0.33
CTSB-203ENST00000420692 ACSF2Q96CM8 615 aaPredicted RBP17.12■□□□□ 0.33
CTSB-203ENST00000420692 CCDC114Q96M63 670 aa17.12■□□□□ 0.33
CTSB-203ENST00000420692 RASSF4Q9H2L5 321 aa17.12■□□□□ 0.33
CTSB-203ENST00000420692 RGS16O15492 202 aaPredicted RBP17.12■□□□□ 0.33
CTSB-203ENST00000420692 ACSL3O95573 720 aa17.12■□□□□ 0.33
CTSB-203ENST00000420692 NFICP08651 508 aa17.12■□□□□ 0.33
CTSB-203ENST00000420692 CHN1P15882 459 aa17.12■□□□□ 0.33
CTSB-203ENST00000420692 ADCY8P40145 1251 aa17.12■□□□□ 0.33
CTSB-203ENST00000420692 EXOC8Q8IYI6 725 aa17.12■□□□□ 0.33
CTSB-203ENST00000420692 TMEM35BQ8NCS4 154 aa17.12■□□□□ 0.33
CTSB-203ENST00000420692 GRK7Q8WTQ7 553 aa17.12■□□□□ 0.33
CTSB-203ENST00000420692 CENPTQ96BT3 561 aa17.12■□□□□ 0.33
CTSB-203ENST00000420692 XPO6Q96QU8 1125 aaKnown RBP17.12■□□□□ 0.33
CTSB-203ENST00000420692 NXF1Q9UBU9 619 aaKnown RBP17.12■□□□□ 0.33
CTSB-203ENST00000420692 TNFSF13BQ9Y275 285 aa17.12■□□□□ 0.33
CTSB-203ENST00000420692 RASGRF2O14827 1237 aa17.11■□□□□ 0.33
CTSB-203ENST00000420692 GAS8O95995 478 aa17.11■□□□□ 0.33
CTSB-203ENST00000420692 AGTP01019 485 aa17.11■□□□□ 0.33
CTSB-203ENST00000420692 CYP2C8P10632 490 aa17.11■□□□□ 0.33
CTSB-203ENST00000420692 EIF4BP23588 611 aaKnown RBP17.11■□□□□ 0.33
CTSB-203ENST00000420692 SLC26A2P50443 739 aa17.11■□□□□ 0.33
CTSB-203ENST00000420692 TTLL12Q14166 644 aaPredicted RBP17.11■□□□□ 0.33
CTSB-203ENST00000420692 KYNUQ16719 465 aa17.11■□□□□ 0.33
CTSB-203ENST00000420692 LONRF1Q17RB8 773 aa17.11■□□□□ 0.33
CTSB-203ENST00000420692 PTPN20Q4JDL3 420 aa17.11■□□□□ 0.33
CTSB-203ENST00000420692 MFSD5Q6N075 450 aa17.11■□□□□ 0.33
CTSB-203ENST00000420692 DNAJC24Q6P3W2 148 aa17.11■□□□□ 0.33
CTSB-203ENST00000420692 RCOR2Q8IZ40 523 aa17.11■□□□□ 0.33
CTSB-203ENST00000420692 ARFGAP1Q8N6T3 406 aa17.11■□□□□ 0.33
CTSB-203ENST00000420692 C1orf127Q8N9H9 656 aa17.11■□□□□ 0.33
CTSB-203ENST00000420692 MPHOSPH6Q99547 160 aaKnown RBP17.11■□□□□ 0.33
CTSB-203ENST00000420692 FHDC1Q9C0D6 1143 aaPredicted RBP17.11■□□□□ 0.33
CTSB-203ENST00000420692 MROH8Q9H579 483 aa17.11■□□□□ 0.33
CTSB-203ENST00000420692 CNOT10Q9H9A5 744 aaKnown RBP17.11■□□□□ 0.33
CTSB-203ENST00000420692 HOMER3Q9NSC5 361 aa17.11■□□□□ 0.33
CTSB-203ENST00000420692 DDX20Q9UHI6 824 aaKnown RBP17.11■□□□□ 0.33
CTSB-203ENST00000420692 ANAPC5Q9UJX4 755 aa17.11■□□□□ 0.33
CTSB-203ENST00000420692 C5orf60A6NFR6 353 aa17.11■□□□□ 0.33
CTSB-203ENST00000420692 INSRRP14616 1297 aa17.11■□□□□ 0.33
CTSB-203ENST00000420692 ATF2P15336 505 aa17.11■□□□□ 0.33
CTSB-203ENST00000420692 IGBP1P78318 339 aa17.11■□□□□ 0.33
CTSB-203ENST00000420692 ORC1Q13415 861 aa17.11■□□□□ 0.33
CTSB-203ENST00000420692 KAZNQ674X7 775 aa17.11■□□□□ 0.33
CTSB-203ENST00000420692 TAPT1Q6NXT6 567 aa17.11■□□□□ 0.33
CTSB-203ENST00000420692 KIAA0319LQ8IZA0 1049 aa17.11■□□□□ 0.33
CTSB-203ENST00000420692 LINC01465Q8N7H1 131 aa17.11■□□□□ 0.33
CTSB-203ENST00000420692 SCLT1Q96NL6 688 aa17.11■□□□□ 0.33
CTSB-203ENST00000420692 TWNKQ96RR1 684 aa17.11■□□□□ 0.33
CTSB-203ENST00000420692 TRAIPQ9BWF2 469 aa17.11■□□□□ 0.33
CTSB-203ENST00000420692 BCO2Q9BYV7 579 aa17.11■□□□□ 0.33
CTSB-203ENST00000420692 ZNF518BQ9C0D4 1074 aa17.11■□□□□ 0.33
CTSB-203ENST00000420692 DNPEPQ9ULA0 475 aa17.11■□□□□ 0.33
CTSB-203ENST00000420692 LACTBL1A8MY62 500 aa17.1■□□□□ 0.33
CTSB-203ENST00000420692 FOXO6A8MYZ6 492 aa17.1■□□□□ 0.33
CTSB-203ENST00000420692 LIASO43766 372 aa17.1■□□□□ 0.33
CTSB-203ENST00000420692 TTC4O95801 387 aa17.1■□□□□ 0.33
CTSB-203ENST00000420692 DRD4P21917 467 aa17.1■□□□□ 0.33
CTSB-203ENST00000420692 RAD23BP54727 409 aa17.1■□□□□ 0.33
CTSB-203ENST00000420692 TFDP1Q14186 410 aa17.1■□□□□ 0.33
CTSB-203ENST00000420692 CCDC38Q502W7 563 aa17.1■□□□□ 0.33
CTSB-203ENST00000420692 LRRC38Q5VT99 294 aa17.1■□□□□ 0.33
CTSB-203ENST00000420692 ARMCX2Q7L311 632 aa17.1■□□□□ 0.33
CTSB-203ENST00000420692 EXOC3L1Q86VI1 746 aa17.1■□□□□ 0.33
CTSB-203ENST00000420692 ERICH1Q86X53 443 aa17.1■□□□□ 0.33
CTSB-203ENST00000420692 ZNF317Q96PQ6 595 aaPredicted RBP17.1■□□□□ 0.33
CTSB-203ENST00000420692 PPP1R16BQ96T49 567 aa17.1■□□□□ 0.33
CTSB-203ENST00000420692 NINJ2Q9NZG7 142 aa17.1■□□□□ 0.33
CTSB-203ENST00000420692 HMGXB4Q9UGU5 601 aa17.1■□□□□ 0.33
CTSB-203ENST00000420692 ATXN2Q99700 1313 aaKnown RBP17.09■□□□□ 0.33
CTSB-203ENST00000420692 A0A087WUV0 522 aaPredicted RBP17.09■□□□□ 0.33
CTSB-203ENST00000420692 TNNC2P02585 160 aa17.09■□□□□ 0.33
CTSB-203ENST00000420692 CREB1P16220 341 aa17.09■□□□□ 0.33
CTSB-203ENST00000420692 OSBPP22059 807 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms