RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 RNF225M0QZC1 329 aaPredicted RBP7.67□□□□□ -1.18
HMGN1-205ENST00000419378 LAD1O00515 517 aa7.67□□□□□ -1.18
HMGN1-205ENST00000419378 KLF4O43474 513 aa7.67□□□□□ -1.18
HMGN1-205ENST00000419378 CSDE1O75534 798 aaKnown RBP7.67□□□□□ -1.18
HMGN1-205ENST00000419378 SRGAP2CP0DJJ0 459 aa7.67□□□□□ -1.18
HMGN1-205ENST00000419378 ZSCAN20P17040 1043 aaPredicted RBP7.67□□□□□ -1.18
HMGN1-205ENST00000419378 RPA1P27694 616 aa7.67□□□□□ -1.18
HMGN1-205ENST00000419378 PRPHP41219 470 aa7.67□□□□□ -1.18
HMGN1-205ENST00000419378 FAM189BP81408 668 aa7.67□□□□□ -1.18
HMGN1-205ENST00000419378 ATP2C1P98194 919 aaPredicted RBP7.67□□□□□ -1.18
HMGN1-205ENST00000419378 LAMTOR4Q0VGL1 99 aa7.67□□□□□ -1.18
HMGN1-205ENST00000419378 SLBPQ14493 270 aaKnown RBP eCLIP7.67□□□□□ -1.18
HMGN1-205ENST00000419378 PPP2R5EQ16537 467 aa7.67□□□□□ -1.18
HMGN1-205ENST00000419378 PAN2Q504Q3 1202 aaKnown RBP7.67□□□□□ -1.18
HMGN1-205ENST00000419378 SGO2Q562F6 1265 aa7.67□□□□□ -1.18
HMGN1-205ENST00000419378 ARSHQ5FYA8 562 aa7.67□□□□□ -1.18
HMGN1-205ENST00000419378 FERMT3Q86UX7 667 aa7.67□□□□□ -1.18
HMGN1-205ENST00000419378 MCATQ8IVS2 390 aaKnown RBP7.67□□□□□ -1.18
HMGN1-205ENST00000419378 IGSF22Q8N9C0 903 aa7.67□□□□□ -1.18
HMGN1-205ENST00000419378 KCT2Q8NC54 265 aa7.67□□□□□ -1.18
HMGN1-205ENST00000419378 FAM13CQ8NE31 585 aa7.67□□□□□ -1.18
HMGN1-205ENST00000419378 ERMNQ8TAM6 284 aa7.67□□□□□ -1.18
HMGN1-205ENST00000419378 PIGOQ8TEQ8 1089 aa7.67□□□□□ -1.18
HMGN1-205ENST00000419378 FBLIM1Q8WUP2 373 aa7.67□□□□□ -1.18
HMGN1-205ENST00000419378 TCP11Q8WWU5 503 aa7.67□□□□□ -1.18
HMGN1-205ENST00000419378 DPH2Q9BQC3 489 aaPredicted RBP7.67□□□□□ -1.18
HMGN1-205ENST00000419378 ACSS3Q9H6R3 686 aa7.67□□□□□ -1.18
HMGN1-205ENST00000419378 ATP6V0A4Q9HBG4 840 aa7.67□□□□□ -1.18
HMGN1-205ENST00000419378 IFT122Q9HBG6 1241 aa7.67□□□□□ -1.18
HMGN1-205ENST00000419378 TMEM161AQ9NX61 479 aa7.67□□□□□ -1.18
HMGN1-205ENST00000419378 LMCD1Q9NZU5 365 aa7.67□□□□□ -1.18
HMGN1-205ENST00000419378 LRWD1Q9UFC0 647 aa7.67□□□□□ -1.18
HMGN1-205ENST00000419378 RWDD3Q9Y3V2 267 aa7.67□□□□□ -1.18
HMGN1-205ENST00000419378 PCDHB7Q9Y5E2 793 aa7.67□□□□□ -1.18
HMGN1-205ENST00000419378 FNDC1Q4ZHG4 1894 aaPredicted RBP7.66□□□□□ -1.18
HMGN1-205ENST00000419378 TTC28Q96AY4 2481 aa7.66□□□□□ -1.18
HMGN1-205ENST00000419378 A0A0U1RQF3 1178 aa7.66□□□□□ -1.18
HMGN1-205ENST00000419378 VPS37CA5D8V6 355 aaPredicted RBP7.66□□□□□ -1.18
HMGN1-205ENST00000419378 TBKBP1A7MCY6 615 aa7.66□□□□□ -1.18
HMGN1-205ENST00000419378 K7ELQ4 463 aaPredicted RBP7.66□□□□□ -1.18
HMGN1-205ENST00000419378 USO1O60763 962 aaKnown RBP7.66□□□□□ -1.18
HMGN1-205ENST00000419378 NFICP08651 508 aa7.66□□□□□ -1.18
HMGN1-205ENST00000419378 FGFR1P11362 822 aa7.66□□□□□ -1.18
HMGN1-205ENST00000419378 XRCC6P12956 609 aaKnown RBP eCLIP7.66□□□□□ -1.18
HMGN1-205ENST00000419378 NME1P15531 152 aaKnown RBP7.66□□□□□ -1.18
HMGN1-205ENST00000419378 BMPR1AP36894 532 aa7.66□□□□□ -1.18
HMGN1-205ENST00000419378 CCT6AP40227 531 aaKnown RBP7.66□□□□□ -1.18
HMGN1-205ENST00000419378 YARSP54577 528 aaKnown RBP7.66□□□□□ -1.18
HMGN1-205ENST00000419378 GPM6BQ13491 265 aa7.66□□□□□ -1.18
HMGN1-205ENST00000419378 CAPSQ13938 189 aa7.66□□□□□ -1.18
HMGN1-205ENST00000419378 MXD4Q14582 209 aaPredicted RBP7.66□□□□□ -1.18
HMGN1-205ENST00000419378 IL17AQ16552 155 aa7.66□□□□□ -1.18
HMGN1-205ENST00000419378 FAM102BQ5T8I3 360 aa7.66□□□□□ -1.18
HMGN1-205ENST00000419378 SLC6A19Q695T7 634 aa7.66□□□□□ -1.18
HMGN1-205ENST00000419378 NLRC3Q7RTR2 1065 aa7.66□□□□□ -1.18
HMGN1-205ENST00000419378 CATSPER4Q7RTX7 472 aa7.66□□□□□ -1.18
HMGN1-205ENST00000419378 CD163Q86VB7 1156 aa7.66□□□□□ -1.18
HMGN1-205ENST00000419378 ECHDC2Q86YB7 292 aa7.66□□□□□ -1.18
HMGN1-205ENST00000419378 MRPL41Q8IXM3 137 aaKnown RBP7.66□□□□□ -1.18
HMGN1-205ENST00000419378 ARMC10Q8N2F6 343 aa7.66□□□□□ -1.18
HMGN1-205ENST00000419378 RNF149Q8NC42 400 aa7.66□□□□□ -1.18
HMGN1-205ENST00000419378 UTP4Q969X6 686 aaKnown RBP7.66□□□□□ -1.18
HMGN1-205ENST00000419378 TM9SF2Q99805 663 aa7.66□□□□□ -1.18
HMGN1-205ENST00000419378 C11orf84Q9BUA3 381 aaPredicted RBP7.66□□□□□ -1.18
HMGN1-205ENST00000419378 RAB34Q9BZG1 259 aa7.66□□□□□ -1.18
HMGN1-205ENST00000419378 INO80BQ9C086 356 aaPredicted RBP7.66□□□□□ -1.18
HMGN1-205ENST00000419378 TNKS2Q9H2K2 1166 aa7.66□□□□□ -1.18
HMGN1-205ENST00000419378 ELAC1Q9H777 363 aaKnown RBP7.66□□□□□ -1.18
HMGN1-205ENST00000419378 MINDY3Q9H8M7 445 aa7.66□□□□□ -1.18
HMGN1-205ENST00000419378 CHST12Q9NRB3 414 aa7.66□□□□□ -1.18
HMGN1-205ENST00000419378 AGPAT5Q9NUQ2 364 aa7.66□□□□□ -1.18
HMGN1-205ENST00000419378 DBR1Q9UK59 544 aaKnown RBP7.66□□□□□ -1.18
HMGN1-205ENST00000419378 PIN4Q9Y237 131 aaKnown RBP7.66□□□□□ -1.18
HMGN1-205ENST00000419378 R3HCC1Q9Y3T6 440 aaKnown RBP7.66□□□□□ -1.18
HMGN1-205ENST00000419378 BRWD1Q9NSI6 2320 aa7.66□□□□□ -1.18
HMGN1-205ENST00000419378 ARHGEF35A5YM69 484 aa7.65□□□□□ -1.18
HMGN1-205ENST00000419378 PP2D1A8MPX8 630 aa7.65□□□□□ -1.18
HMGN1-205ENST00000419378 C1QTNF9BB2RNN3 333 aa7.65□□□□□ -1.18
HMGN1-205ENST00000419378 ASAP2O43150 1006 aa7.65□□□□□ -1.18
HMGN1-205ENST00000419378 RB1P06400 928 aa7.65□□□□□ -1.18
HMGN1-205ENST00000419378 ATF7P17544 494 aaPredicted RBP7.65□□□□□ -1.18
HMGN1-205ENST00000419378 PDCP20941 246 aa7.65□□□□□ -1.18
HMGN1-205ENST00000419378 MUTP22033 750 aa7.65□□□□□ -1.18
HMGN1-205ENST00000419378 GLRA2P23416 452 aa7.65□□□□□ -1.18
HMGN1-205ENST00000419378 GUCY2CP25092 1073 aa7.65□□□□□ -1.18
HMGN1-205ENST00000419378 ARL2P36404 184 aa7.65□□□□□ -1.18
HMGN1-205ENST00000419378 PTENP60484 403 aa7.65□□□□□ -1.18
HMGN1-205ENST00000419378 TFDP1Q14186 410 aa7.65□□□□□ -1.18
HMGN1-205ENST00000419378 PDIA5Q14554 519 aa7.65□□□□□ -1.18
HMGN1-205ENST00000419378 PTPROQ16827 1216 aa7.65□□□□□ -1.18
HMGN1-205ENST00000419378 ATG2AQ2TAZ0 1938 aa7.65□□□□□ -1.18
HMGN1-205ENST00000419378 CLLU1OSQ5K130 101 aa7.65□□□□□ -1.18
HMGN1-205ENST00000419378 CDCP2Q5VXM1 449 aa7.65□□□□□ -1.18
HMGN1-205ENST00000419378 KRT79Q5XKE5 535 aa7.65□□□□□ -1.18
HMGN1-205ENST00000419378 TWF2Q6IBS0 349 aaKnown RBP7.65□□□□□ -1.18
HMGN1-205ENST00000419378 BRAPQ7Z569 592 aa7.65□□□□□ -1.18
HMGN1-205ENST00000419378 SRGAP1Q7Z6B7 1085 aa7.65□□□□□ -1.18
HMGN1-205ENST00000419378 ABI1Q8IZP0 508 aa7.65□□□□□ -1.18
HMGN1-205ENST00000419378 LRRC43Q8N309 656 aa7.65□□□□□ -1.18
HMGN1-205ENST00000419378 RNF169Q8NCN4 708 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms