RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 MMS22LQ6ZRQ5 1243 aa17.83■□□□□ 0.45
SSBP3-205ENST00000417664 FAM228AQ86W67 206 aa17.83■□□□□ 0.45
SSBP3-205ENST00000417664 HACE1Q8IYU2 909 aa17.83■□□□□ 0.45
SSBP3-205ENST00000417664 SLC4A11Q8NBS3 891 aa17.83■□□□□ 0.45
SSBP3-205ENST00000417664 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.83■□□□□ 0.45
SSBP3-205ENST00000417664 WHAMMQ8TF30 809 aa17.83■□□□□ 0.45
SSBP3-205ENST00000417664 TFAP2BQ92481 460 aa17.83■□□□□ 0.45
SSBP3-205ENST00000417664 ALG3Q92685 438 aa17.83■□□□□ 0.45
SSBP3-205ENST00000417664 ZMAT2Q96NC0 199 aaKnown RBP17.83■□□□□ 0.45
SSBP3-205ENST00000417664 SLITRK6Q9H5Y7 841 aa17.83■□□□□ 0.45
SSBP3-205ENST00000417664 OGFRQ9NZT2 677 aa17.83■□□□□ 0.45
SSBP3-205ENST00000417664 CHORDC1Q9UHD1 332 aaPredicted RBP17.83■□□□□ 0.45
SSBP3-205ENST00000417664 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.83■□□□□ 0.45
SSBP3-205ENST00000417664 GOLGA6L10A0A0M3HER8 536 aa17.83■□□□□ 0.44
SSBP3-205ENST00000417664 PROSCO94903 275 aa17.83■□□□□ 0.44
SSBP3-205ENST00000417664 CCND3P30281 292 aaPredicted RBP17.83■□□□□ 0.44
SSBP3-205ENST00000417664 APLP1P51693 650 aa17.83■□□□□ 0.44
SSBP3-205ENST00000417664 CDH8P55286 799 aa17.83■□□□□ 0.44
SSBP3-205ENST00000417664 RWDD2BP57060 319 aa17.83■□□□□ 0.44
SSBP3-205ENST00000417664 ARHGEF6Q15052 776 aa17.83■□□□□ 0.44
SSBP3-205ENST00000417664 CNGA2Q16280 664 aa17.83■□□□□ 0.44
SSBP3-205ENST00000417664 SEL1L2Q5TEA6 688 aa17.83■□□□□ 0.44
SSBP3-205ENST00000417664 DCAF12L1Q5VU92 463 aa17.83■□□□□ 0.44
SSBP3-205ENST00000417664 CCNI2Q6ZMN8 369 aaPredicted RBP17.83■□□□□ 0.44
SSBP3-205ENST00000417664 RNF180Q86T96 592 aa17.83■□□□□ 0.44
SSBP3-205ENST00000417664 ERICH1Q86X53 443 aa17.83■□□□□ 0.44
SSBP3-205ENST00000417664 RNF216Q9NWF9 866 aaPredicted RBP17.83■□□□□ 0.44
SSBP3-205ENST00000417664 L1RE1Q9UN81 338 aa17.83■□□□□ 0.44
SSBP3-205ENST00000417664 SMIM28A0A1B0GU29 152 aa17.82■□□□□ 0.44
SSBP3-205ENST00000417664 RPS6KA5O75582 802 aa17.82■□□□□ 0.44
SSBP3-205ENST00000417664 FGGP02679 453 aa17.82■□□□□ 0.44
SSBP3-205ENST00000417664 RAP1GAPP47736 663 aa17.82■□□□□ 0.44
SSBP3-205ENST00000417664 GUCY2FP51841 1108 aa17.82■□□□□ 0.44
SSBP3-205ENST00000417664 GSCP56915 257 aaPredicted RBP17.82■□□□□ 0.44
SSBP3-205ENST00000417664 RNASE9P60153 205 aaKnown RBP17.82■□□□□ 0.44
SSBP3-205ENST00000417664 FAM47CQ5HY64 1035 aa17.82■□□□□ 0.44
SSBP3-205ENST00000417664 TWF2Q6IBS0 349 aaKnown RBP17.82■□□□□ 0.44
SSBP3-205ENST00000417664 HDXQ7Z353 690 aa17.82■□□□□ 0.44
SSBP3-205ENST00000417664 MAATS1Q7Z4T9 603 aa17.82■□□□□ 0.44
SSBP3-205ENST00000417664 IFT20Q8IY31 132 aa17.82■□□□□ 0.44
SSBP3-205ENST00000417664 EIF1ADQ8N9N8 165 aaKnown RBP17.82■□□□□ 0.44
SSBP3-205ENST00000417664 C1orf131Q8NDD1 294 aaKnown RBP17.82■□□□□ 0.44
SSBP3-205ENST00000417664 FEZF2Q8TBJ5 459 aa17.82■□□□□ 0.44
SSBP3-205ENST00000417664 ZNF560Q96MR9 790 aa17.82■□□□□ 0.44
SSBP3-205ENST00000417664 KRT12Q99456 494 aa17.82■□□□□ 0.44
SSBP3-205ENST00000417664 NT5C1AQ9BXI3 368 aa17.82■□□□□ 0.44
SSBP3-205ENST00000417664 SENP6Q9GZR1 1112 aaPredicted RBP17.82■□□□□ 0.44
SSBP3-205ENST00000417664 DNAI2Q9GZS0 605 aa17.82■□□□□ 0.44
SSBP3-205ENST00000417664 WDR35Q9P2L0 1181 aa17.82■□□□□ 0.44
SSBP3-205ENST00000417664 IP6K2Q9UHH9 426 aa17.82■□□□□ 0.44
SSBP3-205ENST00000417664 DDX20Q9UHI6 824 aaKnown RBP17.82■□□□□ 0.44
SSBP3-205ENST00000417664 HES2Q9Y543 173 aa17.82■□□□□ 0.44
SSBP3-205ENST00000417664 IPPQ9Y573 584 aa17.82■□□□□ 0.44
SSBP3-205ENST00000417664 FAM170AA1A519 330 aa17.81■□□□□ 0.44
SSBP3-205ENST00000417664 GPR182O15218 404 aa17.81■□□□□ 0.44
SSBP3-205ENST00000417664 ELNP15502 786 aa17.81■□□□□ 0.44
SSBP3-205ENST00000417664 SGO2Q562F6 1265 aa17.81■□□□□ 0.44
SSBP3-205ENST00000417664 C9orf57Q5W0N0 161 aa17.81■□□□□ 0.44
SSBP3-205ENST00000417664 UNC93AQ86WB7 457 aa17.81■□□□□ 0.44
SSBP3-205ENST00000417664 C3orf20Q8ND61 904 aa17.81■□□□□ 0.44
SSBP3-205ENST00000417664 CCDC26Q8TAB7 109 aa17.81■□□□□ 0.44
SSBP3-205ENST00000417664 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.81■□□□□ 0.442e-9■■■■■ 80.1
SSBP3-205ENST00000417664 KRT35Q92764 455 aa17.81■□□□□ 0.44
SSBP3-205ENST00000417664 BTBD6Q96KE9 485 aa17.81■□□□□ 0.44
SSBP3-205ENST00000417664 FUT8Q9BYC5 575 aa17.81■□□□□ 0.44
SSBP3-205ENST00000417664 ELOVL4Q9GZR5 314 aa17.81■□□□□ 0.44
SSBP3-205ENST00000417664 MIS12Q9H081 205 aa17.81■□□□□ 0.44
SSBP3-205ENST00000417664 FAM53CQ9NYF3 392 aa17.81■□□□□ 0.44
SSBP3-205ENST00000417664 PARP2Q9UGN5 583 aa17.81■□□□□ 0.44
SSBP3-205ENST00000417664 DMGDHQ9UI17 866 aaKnown RBP17.81■□□□□ 0.44
SSBP3-205ENST00000417664 PIRO00625 290 aa17.8■□□□□ 0.44
SSBP3-205ENST00000417664 SEC31AO94979 1220 aaKnown RBP17.8■□□□□ 0.44
SSBP3-205ENST00000417664 AKAP5P24588 427 aa17.8■□□□□ 0.44
SSBP3-205ENST00000417664 CAP1Q01518 475 aa17.8■□□□□ 0.44
SSBP3-205ENST00000417664 MGAT3Q09327 533 aa17.8■□□□□ 0.44
SSBP3-205ENST00000417664 DNAJC24Q6P3W2 148 aa17.8■□□□□ 0.44
SSBP3-205ENST00000417664 WDTC1Q8N5D0 677 aa17.8■□□□□ 0.44
SSBP3-205ENST00000417664 SMG8Q8ND04 991 aaKnown RBP17.8■□□□□ 0.44
SSBP3-205ENST00000417664 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.8■□□□□ 0.44
SSBP3-205ENST00000417664 PDCD11Q14690 1871 aaKnown RBP17.8■□□□□ 0.44
SSBP3-205ENST00000417664 TRIP11Q15643 1979 aa17.8■□□□□ 0.44
SSBP3-205ENST00000417664 TCRBV5S1A1TA0A578 114 aa17.8■□□□□ 0.44
SSBP3-205ENST00000417664 MAP2K7O14733 419 aa17.8■□□□□ 0.44
SSBP3-205ENST00000417664 SART1O43290 800 aaKnown RBP17.8■□□□□ 0.44
SSBP3-205ENST00000417664 PSTPIP1O43586 416 aa17.8■□□□□ 0.44
SSBP3-205ENST00000417664 TRPA1O75762 1119 aa17.8■□□□□ 0.44
SSBP3-205ENST00000417664 CAPN15O75808 1086 aa17.8■□□□□ 0.44
SSBP3-205ENST00000417664 NDST1P52848 882 aa17.8■□□□□ 0.44
SSBP3-205ENST00000417664 PRMT2P55345 433 aa17.8■□□□□ 0.44
SSBP3-205ENST00000417664 FBXO47Q5MNV8 452 aa17.8■□□□□ 0.44
SSBP3-205ENST00000417664 CD99L2Q8TCZ2 262 aa17.8■□□□□ 0.44
SSBP3-205ENST00000417664 RAET1EQ8TD07 263 aa17.8■□□□□ 0.44
SSBP3-205ENST00000417664 HEXIM2Q96MH2 286 aaKnown RBP17.8■□□□□ 0.44
SSBP3-205ENST00000417664 APOL6Q9BWW8 343 aa17.8■□□□□ 0.44
SSBP3-205ENST00000417664 GDF3Q9NR23 364 aa17.8■□□□□ 0.44
SSBP3-205ENST00000417664 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.8■□□□□ 0.443e-6■■■□□ 18.1
SSBP3-205ENST00000417664 GDAP2Q9NXN4 497 aa17.8■□□□□ 0.44
SSBP3-205ENST00000417664 TUBGCP4Q9UGJ1 667 aa17.8■□□□□ 0.44
SSBP3-205ENST00000417664 ST3GAL5Q9UNP4 418 aa17.8■□□□□ 0.44
SSBP3-205ENST00000417664 SNX9Q9Y5X1 595 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms