RNA–Protein interactions for RNA: ENST00000417641.6

VRK2-203, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK2, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-203ENST00000417641 LLGL2Q6P1M3 1020 aa8.29□□□□□ -1.08
VRK2-203ENST00000417641 NET1Q7Z628 596 aaPredicted RBP8.29□□□□□ -1.08
VRK2-203ENST00000417641 CHSY1Q86X52 802 aa8.29□□□□□ -1.08
VRK2-203ENST00000417641 FBXO11Q86XK2 927 aa8.29□□□□□ -1.08
VRK2-203ENST00000417641 RHOT1Q8IXI2 618 aa8.29□□□□□ -1.08
VRK2-203ENST00000417641 DHX38Q92620 1227 aaKnown RBP8.29□□□□□ -1.08
VRK2-203ENST00000417641 ECSITQ9BQ95 431 aa8.29□□□□□ -1.08
VRK2-203ENST00000417641 LBHD1Q9BQE6 289 aaPredicted RBP8.29□□□□□ -1.08
VRK2-203ENST00000417641 WDR83Q9BRX9 315 aaKnown RBP8.29□□□□□ -1.08
VRK2-203ENST00000417641 PHACTR1Q9C0D0 580 aa8.29□□□□□ -1.08
VRK2-203ENST00000417641 C12orf65Q9H3J6 166 aaKnown RBP8.29□□□□□ -1.08
VRK2-203ENST00000417641 MANSC1Q9H8J5 431 aa8.29□□□□□ -1.08
VRK2-203ENST00000417641 C17orf75Q9HAS0 396 aa8.29□□□□□ -1.08
VRK2-203ENST00000417641 LARSQ9P2J5 1176 aaKnown RBP8.29□□□□□ -1.08
VRK2-203ENST00000417641 ATXN10Q9UBB4 475 aa8.29□□□□□ -1.08
VRK2-203ENST00000417641 POLIQ9UNA4 740 aa8.29□□□□□ -1.08
VRK2-203ENST00000417641 DRG1Q9Y295 367 aaKnown RBP8.29□□□□□ -1.08
VRK2-203ENST00000417641 COL16A1Q07092 1604 aaPredicted RBP8.29□□□□□ -1.08
VRK2-203ENST00000417641 ZNFX1Q9P2E3 1918 aaKnown RBP8.28□□□□□ -1.08
VRK2-203ENST00000417641 DENND3A2RUS2 1198 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 C6orf229H3BNL8 230 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 KCNQ2O43526 872 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 RNASEH1O60930 286 aaKnown RBP8.28□□□□□ -1.08
VRK2-203ENST00000417641 CALCAP01258 141 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 PABPC4LP0CB38 370 aaKnown RBP8.28□□□□□ -1.08
VRK2-203ENST00000417641 PYGBP11216 843 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 EEF2P13639 858 aaKnown RBP8.28□□□□□ -1.08
VRK2-203ENST00000417641 ETS1P14921 441 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 HOXA13P31271 388 aaPredicted RBP8.28□□□□□ -1.08
VRK2-203ENST00000417641 PGM1P36871 562 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 ARL4CP56559 192 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 GEMIN4P57678 1058 aaKnown RBP8.28□□□□□ -1.08
VRK2-203ENST00000417641 GTF2BQ00403 316 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 ALCAMQ13740 583 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 SHROOM1Q2M3G4 852 aaPredicted RBP8.28□□□□□ -1.08
VRK2-203ENST00000417641 LRRC23Q53EV4 343 aaPredicted RBP8.28□□□□□ -1.08
VRK2-203ENST00000417641 ADGRG6Q86SQ4 1221 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 TTC7BQ86TV6 843 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 VPS52Q8N1B4 723 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 STKLD1Q8NE28 680 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 DCAKDQ8WVC6 231 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 OPTNQ96CV9 577 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 CCDC17Q96LX7 622 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 ACCSQ96QU6 501 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 UNC45AQ9H3U1 944 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 ST6GALNAC4Q9H4F1 302 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 IL1RAPL1Q9NZN1 696 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 ANGPTL2Q9UKU9 493 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 DNPEPQ9ULA0 475 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 FARP1Q9Y4F1 1045 aaPredicted RBP8.28□□□□□ -1.08
VRK2-203ENST00000417641 COMMD3-BMI1R4GMX3 469 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 A0A0G2JND7 137 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 K7ENM7 598 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 FCHO1O14526 889 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 RPS6KA4O75676 772 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 SPATA31D3P0C874 917 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 ZCCHC18P0CG32 403 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 ESRRAP11474 423 aaPredicted RBP8.28□□□□□ -1.08
VRK2-203ENST00000417641 GRIA2P42262 883 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 ACTR3P61158 418 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 SNRPFP62306 86 aaKnown RBP8.28□□□□□ -1.08
VRK2-203ENST00000417641 MAP3K10Q02779 954 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 CDC16Q13042 620 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 EFTUD2Q15029 972 aaKnown RBP eCLIP8.28□□□□□ -1.089e-7■■■■■ 40
VRK2-203ENST00000417641 OASLQ15646 514 aaKnown RBP8.28□□□□□ -1.08
VRK2-203ENST00000417641 EAPPQ56P03 285 aaPredicted RBP8.28□□□□□ -1.08
VRK2-203ENST00000417641 HP1BP3Q5SSJ5 553 aaPredicted RBP8.28□□□□□ -1.08
VRK2-203ENST00000417641 TMCO4Q5TGY1 634 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 IZUMO2Q6UXV1 221 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 SPATA31D4Q6ZUB0 917 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 MON1BQ7L1V2 547 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 NLRX1Q86UT6 975 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 TREML1Q86YW5 311 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 FBXO27Q8NI29 283 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 STMN2Q93045 179 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 MCUR1Q96AQ8 359 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 ALKBH8Q96BT7 664 aaKnown RBP8.28□□□□□ -1.08
VRK2-203ENST00000417641 OXNAD1Q96HP4 312 aaPredicted RBP8.28□□□□□ -1.08
VRK2-203ENST00000417641 PANX3Q96QZ0 392 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 TSSK1BQ9BXA7 367 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 ADAM33Q9BZ11 813 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 RANBP17Q9H2T7 1088 aaKnown RBP8.28□□□□□ -1.08
VRK2-203ENST00000417641 VCX3BQ9H321 246 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 VPS37BQ9H9H4 285 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 GPAMQ9HCL2 828 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 VCX3AQ9NNX9 186 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.28□□□□□ -1.082e-6■■■■■ 96.1
VRK2-203ENST00000417641 TMCO1Q9UM00 188 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 SHOC2Q9UQ13 582 aa8.28□□□□□ -1.08
VRK2-203ENST00000417641 WDR91A4D1P6 747 aa8.27□□□□□ -1.09
VRK2-203ENST00000417641 E7ESA3 106 aa8.27□□□□□ -1.09
VRK2-203ENST00000417641 CHMP2AO43633 222 aa8.27□□□□□ -1.09
VRK2-203ENST00000417641 RANBP1P43487 201 aa8.27□□□□□ -1.09
VRK2-203ENST00000417641 ARSEP51690 589 aa8.27□□□□□ -1.09
VRK2-203ENST00000417641 KCNQ4P56696 695 aa8.27□□□□□ -1.09
VRK2-203ENST00000417641 SLC18A2Q05940 514 aa8.27□□□□□ -1.09
VRK2-203ENST00000417641 PDIA2Q13087 525 aaKnown RBP8.27□□□□□ -1.09
VRK2-203ENST00000417641 GRM2Q14416 872 aa8.27□□□□□ -1.09
VRK2-203ENST00000417641 RC3H1Q5TC82 1133 aaKnown RBP8.27□□□□□ -1.09
VRK2-203ENST00000417641 ARMC3Q5W041 872 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms