RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 CMASQ8NFW8 434 aaPredicted RBP18.8■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 TAS1R2Q8TE23 839 aa18.8■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 RTP3Q9BQQ7 232 aa18.8■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 ACBD6Q9BR61 282 aa18.8■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 RAB20Q9NX57 234 aa18.8■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 FBXW11Q9UKB1 542 aa18.8■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 BRWD1Q9NSI6 2320 aa18.8■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 P4HA1P13674 534 aa18.79■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 ATF2P15336 505 aa18.79■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 WARSP23381 471 aaKnown RBP18.79■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 PIK3CAP42336 1068 aa18.79■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 FMO5P49326 533 aa18.79■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 TNNC1P63316 161 aa18.79■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 RBM10P98175 930 aaKnown RBP18.79■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 SMARCB1Q12824 385 aa18.79■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 NFKBIBQ15653 356 aa18.79■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 PUS10Q3MIT2 529 aaKnown RBP18.79■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 CBWD6Q4V339 395 aa18.79■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 ZNF667Q5HYK9 610 aa18.79■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 CBWD3Q5JTY5 395 aa18.79■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 CBWD5Q5RIA9 395 aa18.79■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 SYCE2Q6PIF2 218 aa18.79■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 CYP26C1Q6V0L0 522 aa18.79■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 KREMEN2Q8NCW0 462 aa18.79■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 KBTBD7Q8WVZ9 684 aa18.79■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 CNOT6LQ96LI5 555 aaKnown RBP18.79■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 BPIFA3Q9BQP9 254 aa18.79■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 FUCA2Q9BTY2 467 aa18.79■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 IMPG2Q9BZV3 1241 aa18.79■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 ZCWPW1Q9H0M4 648 aa18.79■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 PRDM6Q9NQX0 595 aa18.79■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 AFF4Q9UHB7 1163 aaKnown RBP18.79■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 BARX2Q9UMQ3 279 aaPredicted RBP18.79■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.79■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 WDR27A2RRH5 827 aa18.78■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 KCNA5P22460 613 aa18.78■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 MYL7Q01449 175 aa18.78■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 KCNH2Q12809 1159 aa18.78■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 LLGL2Q6P1M3 1020 aa18.78■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 GLYCTKQ8IVS8 523 aa18.78■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 ADGRF2Q8IZF7 708 aa18.78■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 SMRP1Q8NCR6 262 aa18.78■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 S1PR5Q9H228 398 aa18.78■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 FAM124BQ9H5Z6 455 aaPredicted RBP18.78■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 MAN1C1Q9NR34 630 aa18.78■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 ZDHHC7Q9NXF8 308 aa18.78■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 HSFX1Q9UBD0 423 aa18.78■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 CD207Q9UJ71 328 aa18.78■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 AFPP02771 609 aaKnown RBP18.77■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 POU2F2P09086 479 aa18.77■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 PCSK1P29120 753 aa18.77■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 HOXA9P31269 272 aa18.77■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 ITIH3Q06033 890 aa18.77■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 CETN1Q12798 172 aa18.77■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 C11orf57Q6ZUT1 292 aaPredicted RBP18.77■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 TCEAL8Q8IYN2 117 aa18.77■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 CCDC150Q8NCX0 1101 aa18.77■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 OR10T2Q8NGX3 314 aa18.77■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 C2orf15Q8WU43 125 aaKnown RBP18.77■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 SEMA4DQ92854 862 aa18.77■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 MMS19Q96T76 1030 aa18.77■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 NAT10Q9H0A0 1025 aaKnown RBP18.77■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 MMRN2Q9H8L6 949 aa18.77■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 SFXN1Q9H9B4 322 aa18.77■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 CYP3A43Q9HB55 503 aa18.77■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 DDX43Q9NXZ2 648 aaKnown RBP18.77■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 NFE2L3Q9Y4A8 694 aa18.77■□□□□ 0.6
COMMD3-BMI1-201ENST00000417470 ZMYND10O75800 440 aa18.76■□□□□ 0.59
COMMD3-BMI1-201ENST00000417470 EEF1GP26641 437 aaKnown RBP18.76■□□□□ 0.59
COMMD3-BMI1-201ENST00000417470 NOP14P78316 857 aaKnown RBP18.76■□□□□ 0.59
COMMD3-BMI1-201ENST00000417470 MRPS5P82675 430 aaKnown RBP18.76■□□□□ 0.59
COMMD3-BMI1-201ENST00000417470 EP400NLQ6ZTU2 488 aa18.76■□□□□ 0.59
COMMD3-BMI1-201ENST00000417470 CCDC149Q6ZUS6 474 aa18.76■□□□□ 0.59
COMMD3-BMI1-201ENST00000417470 OSTM1Q86WC4 334 aa18.76■□□□□ 0.59
COMMD3-BMI1-201ENST00000417470 DCP1BQ8IZD4 617 aaKnown RBP18.76■□□□□ 0.59
COMMD3-BMI1-201ENST00000417470 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.76■□□□□ 0.59
COMMD3-BMI1-201ENST00000417470 BCO2Q9BYV7 579 aa18.76■□□□□ 0.59
COMMD3-BMI1-201ENST00000417470 DNAJC25Q9H1X3 360 aa18.76■□□□□ 0.59
COMMD3-BMI1-201ENST00000417470 ADAM7Q9H2U9 754 aa18.76■□□□□ 0.59
COMMD3-BMI1-201ENST00000417470 APOBEC3GQ9HC16 384 aaKnown RBP18.76■□□□□ 0.59
COMMD3-BMI1-201ENST00000417470 NXF1Q9UBU9 619 aaKnown RBP18.76■□□□□ 0.59
COMMD3-BMI1-201ENST00000417470 CDH9Q9ULB4 789 aa18.76■□□□□ 0.59
COMMD3-BMI1-201ENST00000417470 TSC2P49815 1807 aa18.76■□□□□ 0.59
COMMD3-BMI1-201ENST00000417470 MTCL1Q9Y4B5 1905 aaKnown RBP18.75■□□□□ 0.59
COMMD3-BMI1-201ENST00000417470 H3BQ06 376 aaPredicted RBP18.75■□□□□ 0.59
COMMD3-BMI1-201ENST00000417470 HNRNPA1P09651 372 aaKnown RBP eCLIP18.75■□□□□ 0.59
COMMD3-BMI1-201ENST00000417470 CPB1P15086 417 aa18.75■□□□□ 0.59
COMMD3-BMI1-201ENST00000417470 GNL1P36915 607 aaPredicted RBP18.75■□□□□ 0.59
COMMD3-BMI1-201ENST00000417470 ASPAP45381 313 aa18.75■□□□□ 0.59
COMMD3-BMI1-201ENST00000417470 TSPY1Q01534 308 aa18.75■□□□□ 0.59
COMMD3-BMI1-201ENST00000417470 MYL5Q02045 173 aa18.75■□□□□ 0.59
COMMD3-BMI1-201ENST00000417470 SMAD4Q13485 552 aaKnown RBP18.75■□□□□ 0.59
COMMD3-BMI1-201ENST00000417470 WDR44Q5JSH3 913 aa18.75■□□□□ 0.59
COMMD3-BMI1-201ENST00000417470 INTS6LQ5JSJ4 861 aaKnown RBP18.75■□□□□ 0.59
COMMD3-BMI1-201ENST00000417470 CDKAL1Q5VV42 579 aa18.75■□□□□ 0.59
COMMD3-BMI1-201ENST00000417470 FAM171BQ6P995 826 aa18.75■□□□□ 0.59
COMMD3-BMI1-201ENST00000417470 RNF19BQ6ZMZ0 732 aa18.75■□□□□ 0.59
COMMD3-BMI1-201ENST00000417470 LMO3Q8TAP4 145 aa18.75■□□□□ 0.59
COMMD3-BMI1-201ENST00000417470 SUSD6Q92537 303 aa18.75■□□□□ 0.59
COMMD3-BMI1-201ENST00000417470 TMEM209Q96SK2 561 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms