RNA–Protein interactions for RNA: ENST00000416742.5

LINC00494-201, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best) BASIC

Gene LINC00494, Length 3,544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-201ENST00000416742 NFX1Q12986 1120 aaKnown RBP10.54□□□□□ -0.72
LINC00494-201ENST00000416742 PPIL2Q13356 520 aa10.54□□□□□ -0.72
LINC00494-201ENST00000416742 C9orf131Q5VYM1 1079 aa10.54□□□□□ -0.72
LINC00494-201ENST00000416742 CCDC62Q6P9F0 684 aa10.54□□□□□ -0.72
LINC00494-201ENST00000416742 MFSD7Q6UXD7 560 aa10.54□□□□□ -0.72
LINC00494-201ENST00000416742 FASTKD5Q7L8L6 764 aaKnown RBP10.54□□□□□ -0.72
LINC00494-201ENST00000416742 KATNAL2Q8IYT4 538 aa10.54□□□□□ -0.72
LINC00494-201ENST00000416742 MICALL1Q8N3F8 863 aa10.54□□□□□ -0.72
LINC00494-201ENST00000416742 EXD1Q8NHP7 514 aa10.54□□□□□ -0.72
LINC00494-201ENST00000416742 TLCD1Q96CP7 247 aa10.54□□□□□ -0.72
LINC00494-201ENST00000416742 CDT1Q9H211 546 aa10.54□□□□□ -0.72
LINC00494-201ENST00000416742 ZNF148Q9UQR1 794 aa10.54□□□□□ -0.72
LINC00494-201ENST00000416742 A0A087WZ62 844 aa10.54□□□□□ -0.72
LINC00494-201ENST00000416742 GPR25O00155 361 aa10.54□□□□□ -0.72
LINC00494-201ENST00000416742 ABLIM1O14639 778 aa10.54□□□□□ -0.72
LINC00494-201ENST00000416742 ZNF667Q5HYK9 610 aa10.54□□□□□ -0.72
LINC00494-201ENST00000416742 DENND1BQ6P3S1 775 aa10.54□□□□□ -0.72
LINC00494-201ENST00000416742 TSHZ1Q6ZSZ6 1077 aa10.54□□□□□ -0.72
LINC00494-201ENST00000416742 CPLX4Q7Z7G2 160 aa10.54□□□□□ -0.72
LINC00494-201ENST00000416742 CPB2Q96IY4 423 aa10.54□□□□□ -0.72
LINC00494-201ENST00000416742 FDXACB1Q9BRP7 624 aaPredicted RBP10.54□□□□□ -0.72
LINC00494-201ENST00000416742 FZD8Q9H461 694 aa10.54□□□□□ -0.72
LINC00494-201ENST00000416742 SYNCQ9H7C4 482 aa10.54□□□□□ -0.72
LINC00494-201ENST00000416742 LRRD1A4D1F6 860 aa10.54□□□□□ -0.72
LINC00494-201ENST00000416742 FAM107AO95990 144 aa10.54□□□□□ -0.72
LINC00494-201ENST00000416742 CHN1P15882 459 aa10.54□□□□□ -0.72
LINC00494-201ENST00000416742 OGDHQ02218 1023 aa10.54□□□□□ -0.72
LINC00494-201ENST00000416742 PTK6Q13882 451 aa10.54□□□□□ -0.72
LINC00494-201ENST00000416742 CCNG2Q16589 344 aa10.54□□□□□ -0.72
LINC00494-201ENST00000416742 TXNRD3NBQ6F5E7 133 aa10.54□□□□□ -0.72
LINC00494-201ENST00000416742 WDTC1Q8N5D0 677 aa10.54□□□□□ -0.72
LINC00494-201ENST00000416742 UBR7Q8N806 425 aa10.54□□□□□ -0.72
LINC00494-201ENST00000416742 AAASQ9NRG9 546 aa10.54□□□□□ -0.72
LINC00494-201ENST00000416742 TJP2Q9UDY2 1190 aa10.54□□□□□ -0.72
LINC00494-201ENST00000416742 KCNH4Q9UQ05 1017 aa10.54□□□□□ -0.72
LINC00494-201ENST00000416742 WDR90Q96KV7 1748 aa10.54□□□□□ -0.72
LINC00494-201ENST00000416742 PTPRFP10586 1907 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 DNAJC25-GNG10A0A024R161 153 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 LACTBL1A8MY62 500 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 VTNP04004 478 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 NFICP08651 508 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 IQCF3P0C7M6 154 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 IVDP26440 423 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 IFT88Q13099 833 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 IZUMO3Q5VZ72 239 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 PPP1R2P3Q6NXS1 205 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 ARMCX2Q7L311 632 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 OTUD6BQ8N6M0 293 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 MROH8Q9H579 483 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 ZWILCHQ9H900 591 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 HOMER3Q9NSC5 361 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 ERAP1Q9NZ08 941 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 PPME1Q9Y570 386 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 ITGB3P05106 788 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 STAG3L1P0CL83 205 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 MBTD1Q05BQ5 628 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 GRM1Q13255 1194 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 KLF1Q13351 362 aaPredicted RBP10.53□□□□□ -0.72
LINC00494-201ENST00000416742 ARMC9Q7Z3E5 817 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 RCOR2Q8IZ40 523 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 SLCO2A1Q92959 643 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 SLC10A4Q96EP9 437 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 PGM2Q96G03 612 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 XYLT2Q9H1B5 865 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 GINS2Q9Y248 185 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 TRAPPC3O43617 180 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 ZSCAN5DPP0CG00 497 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 MAGEA9P43362 315 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 ASPAP45381 313 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 DYNLT1P63172 113 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 ZNF252P-AS1Q0IIN9 211 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 AUHQ13825 339 aaKnown RBP10.53□□□□□ -0.72
LINC00494-201ENST00000416742 QPCTQ16769 361 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 DPY19L2Q6NUT2 758 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 SYDE1Q6ZW31 735 aaPredicted RBP10.53□□□□□ -0.72
LINC00494-201ENST00000416742 MICALCLQ6ZW33 695 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 TRMT10CQ7L0Y3 403 aaKnown RBP10.53□□□□□ -0.72
LINC00494-201ENST00000416742 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.53□□□□□ -0.72
LINC00494-201ENST00000416742 CCDC89Q8N998 374 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 MGARPQ8TDB4 240 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 IPO4Q8TEX9 1081 aaKnown RBP10.53□□□□□ -0.72
LINC00494-201ENST00000416742 AFG1LQ8WV93 481 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 RBM41Q96IZ5 413 aaKnown RBP10.53□□□□□ -0.72
LINC00494-201ENST00000416742 C9orf72Q96LT7 481 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 TRAIPQ9BWF2 469 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 CNOT10Q9H9A5 744 aaKnown RBP10.53□□□□□ -0.72
LINC00494-201ENST00000416742 PTPRHQ9HD43 1115 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 DNPEPQ9ULA0 475 aa10.53□□□□□ -0.72
LINC00494-201ENST00000416742 ASB14A6NK59 587 aa10.52□□□□□ -0.73
LINC00494-201ENST00000416742 TP73O15350 636 aa10.52□□□□□ -0.73
LINC00494-201ENST00000416742 ASAP2O43150 1006 aa10.52□□□□□ -0.73
LINC00494-201ENST00000416742 B4GALT4O60513 344 aa10.52□□□□□ -0.73
LINC00494-201ENST00000416742 IFNB1P01574 187 aa10.52□□□□□ -0.73
LINC00494-201ENST00000416742 ZNF286BP0CG31 522 aa10.52□□□□□ -0.73
LINC00494-201ENST00000416742 ETS1P14921 441 aa10.52□□□□□ -0.73
LINC00494-201ENST00000416742 PSMA2P25787 234 aa10.52□□□□□ -0.73
LINC00494-201ENST00000416742 PHKA2P46019 1235 aa10.52□□□□□ -0.73
LINC00494-201ENST00000416742 IFNAR2P48551 515 aa10.52□□□□□ -0.73
LINC00494-201ENST00000416742 SLC26A2P50443 739 aa10.52□□□□□ -0.73
LINC00494-201ENST00000416742 PSMC1P62191 440 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms