RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 CCNE1P24864 410 aa15.61■□□□□ 0.09
PAF1-202ENST00000416728 GABRR2P28476 465 aa15.61■□□□□ 0.09
PAF1-202ENST00000416728 TUFMP49411 452 aaKnown RBP15.61■□□□□ 0.09
PAF1-202ENST00000416728 TAF6P49848 677 aa15.61■□□□□ 0.09
PAF1-202ENST00000416728 CCR3P51677 355 aa15.61■□□□□ 0.09
PAF1-202ENST00000416728 KPNA1P52294 538 aaPredicted RBP15.61■□□□□ 0.09
PAF1-202ENST00000416728 MLLT6P55198 1093 aaPredicted RBP15.61■□□□□ 0.09
PAF1-202ENST00000416728 POU5F1Q01860 360 aaKnown RBP15.61■□□□□ 0.09
PAF1-202ENST00000416728 FCHO2Q0JRZ9 810 aa15.61■□□□□ 0.09
PAF1-202ENST00000416728 PUM1Q14671 1186 aaKnown RBP eCLIP15.61■□□□□ 0.09
PAF1-202ENST00000416728 VEPH1Q14D04 833 aa15.61■□□□□ 0.09
PAF1-202ENST00000416728 MGAT5BQ3V5L5 792 aa15.61■□□□□ 0.09
PAF1-202ENST00000416728 SLC39A12Q504Y0 691 aa15.61■□□□□ 0.09
PAF1-202ENST00000416728 ARHGAP15Q53QZ3 475 aa15.61■□□□□ 0.09
PAF1-202ENST00000416728 C1orf228Q6PIY5 440 aa15.61■□□□□ 0.09
PAF1-202ENST00000416728 GPR179Q6PRD1 2367 aa15.61■□□□□ 0.09
PAF1-202ENST00000416728 MAMSTRQ6ZN01 415 aa15.61■□□□□ 0.09
PAF1-202ENST00000416728 GAREM2Q75VX8 874 aa15.61■□□□□ 0.09
PAF1-202ENST00000416728 ZNF720Q7Z2F6 126 aa15.61■□□□□ 0.09
PAF1-202ENST00000416728 DGLUCYQ7Z3D6 616 aa15.61■□□□□ 0.09
PAF1-202ENST00000416728 THEM5Q8N1Q8 247 aa15.61■□□□□ 0.09
PAF1-202ENST00000416728 POMGNT1Q8WZA1 660 aa15.61■□□□□ 0.09
PAF1-202ENST00000416728 HVCN1Q96D96 273 aa15.61■□□□□ 0.09
PAF1-202ENST00000416728 PYM1Q9BRP8 204 aaKnown RBP15.61■□□□□ 0.09
PAF1-202ENST00000416728 ZCWPW1Q9H0M4 648 aa15.61■□□□□ 0.09
PAF1-202ENST00000416728 DPP3Q9NY33 737 aa15.61■□□□□ 0.09
PAF1-202ENST00000416728 STK17AQ9UEE5 414 aa15.61■□□□□ 0.09
PAF1-202ENST00000416728 CCDC39Q9UFE4 941 aa15.61■□□□□ 0.09
PAF1-202ENST00000416728 PATJQ8NI35 1801 aa15.6■□□□□ 0.09
PAF1-202ENST00000416728 SLC38A8A6NNN8 435 aa15.6■□□□□ 0.09
PAF1-202ENST00000416728 PDCP20941 246 aa15.6■□□□□ 0.09
PAF1-202ENST00000416728 NRLP54845 237 aa15.6■□□□□ 0.09
PAF1-202ENST00000416728 POSTNQ15063 836 aa15.6■□□□□ 0.09
PAF1-202ENST00000416728 GPR158Q5T848 1215 aa15.6■□□□□ 0.09
PAF1-202ENST00000416728 USP49Q70CQ1 688 aa15.6■□□□□ 0.09
PAF1-202ENST00000416728 GPIHBP1Q8IV16 184 aa15.6■□□□□ 0.09
PAF1-202ENST00000416728 GCNAQ96QF7 691 aa15.6■□□□□ 0.09
PAF1-202ENST00000416728 LPIN3Q9BQK8 851 aa15.6■□□□□ 0.09
PAF1-202ENST00000416728 C8orf33Q9H7E9 229 aaPredicted RBP15.6■□□□□ 0.09
PAF1-202ENST00000416728 SEL1LQ9UBV2 794 aa15.6■□□□□ 0.09
PAF1-202ENST00000416728 CLIC4Q9Y696 253 aa15.6■□□□□ 0.09
PAF1-202ENST00000416728 F5P12259 2224 aa15.6■□□□□ 0.09
PAF1-202ENST00000416728 FANCMQ8IYD8 2048 aa15.59■□□□□ 0.09
PAF1-202ENST00000416728 DCHS1Q96JQ0 3298 aa15.59■□□□□ 0.09
PAF1-202ENST00000416728 CHRNB1P11230 501 aa15.59■□□□□ 0.09
PAF1-202ENST00000416728 CDC25CP30307 473 aa15.59■□□□□ 0.09
PAF1-202ENST00000416728 TXLNAP40222 546 aa15.59■□□□□ 0.09
PAF1-202ENST00000416728 CDR1P51861 262 aa15.59■□□□□ 0.09
PAF1-202ENST00000416728 SMARCB1Q12824 385 aa15.59■□□□□ 0.09
PAF1-202ENST00000416728 LRRC32Q14392 662 aa15.59■□□□□ 0.09
PAF1-202ENST00000416728 PTPAQ15257 358 aa15.59■□□□□ 0.09
PAF1-202ENST00000416728 TAF12Q16514 161 aa15.59■□□□□ 0.09
PAF1-202ENST00000416728 SV2CQ496J9 727 aa15.59■□□□□ 0.09
PAF1-202ENST00000416728 ARHGAP29Q52LW3 1261 aa15.59■□□□□ 0.09
PAF1-202ENST00000416728 RRAGBQ5VZM2 374 aa15.59■□□□□ 0.09
PAF1-202ENST00000416728 WSCD1Q658N2 575 aa15.59■□□□□ 0.09
PAF1-202ENST00000416728 CRELD2Q6UXH1 353 aaPredicted RBP15.59■□□□□ 0.09
PAF1-202ENST00000416728 EFCAB13Q8IY85 973 aa15.59■□□□□ 0.09
PAF1-202ENST00000416728 GPR161Q8N6U8 529 aaKnown RBP15.59■□□□□ 0.09
PAF1-202ENST00000416728 SPPL2BQ8TCT7 592 aa15.59■□□□□ 0.09
PAF1-202ENST00000416728 C2orf15Q8WU43 125 aaKnown RBP15.59■□□□□ 0.09
PAF1-202ENST00000416728 MKNK1Q9BUB5 465 aa15.59■□□□□ 0.09
PAF1-202ENST00000416728 IKZF4Q9H2S9 585 aa15.59■□□□□ 0.09
PAF1-202ENST00000416728 MRPL44Q9H9J2 332 aaKnown RBP15.59■□□□□ 0.09
PAF1-202ENST00000416728 OBP2AQ9NY56 170 aa15.59■□□□□ 0.09
PAF1-202ENST00000416728 EXOC7Q9UPT5 735 aa15.59■□□□□ 0.09
PAF1-202ENST00000416728 TULP1O00294 542 aaPredicted RBP15.58■□□□□ 0.08
PAF1-202ENST00000416728 PPP1R37O75864 691 aa15.58■□□□□ 0.08
PAF1-202ENST00000416728 IL18RAPO95256 599 aa15.58■□□□□ 0.08
PAF1-202ENST00000416728 TDGF1P13385 188 aa15.58■□□□□ 0.08
PAF1-202ENST00000416728 GAP43P17677 238 aa15.58■□□□□ 0.08
PAF1-202ENST00000416728 ATF6P18850 670 aa15.58■□□□□ 0.08
PAF1-202ENST00000416728 ADSSP30520 456 aa15.58■□□□□ 0.08
PAF1-202ENST00000416728 CXCL12P48061 93 aa15.58■□□□□ 0.08
PAF1-202ENST00000416728 SOX9P48436 509 aa15.58■□□□□ 0.08
PAF1-202ENST00000416728 CYP4F8P98187 520 aa15.58■□□□□ 0.08
PAF1-202ENST00000416728 CUL4AQ13619 759 aa15.58■□□□□ 0.08
PAF1-202ENST00000416728 SV2BQ7L1I2 683 aa15.58■□□□□ 0.08
PAF1-202ENST00000416728 NT5DC4Q86YG4 428 aa15.58■□□□□ 0.08
PAF1-202ENST00000416728 ZNF560Q96MR9 790 aa15.58■□□□□ 0.08
PAF1-202ENST00000416728 TASP1Q9H6P5 420 aa15.58■□□□□ 0.08
PAF1-202ENST00000416728 ABI2Q9NYB9 513 aaPredicted RBP15.58■□□□□ 0.08
PAF1-202ENST00000416728 DLL3Q9NYJ7 618 aa15.58■□□□□ 0.08
PAF1-202ENST00000416728 FBXO2Q9UK22 296 aaPredicted RBP15.58■□□□□ 0.08
PAF1-202ENST00000416728 GMEB2Q9UKD1 530 aa15.58■□□□□ 0.08
PAF1-202ENST00000416728 RAB23Q9ULC3 237 aa15.58■□□□□ 0.08
PAF1-202ENST00000416728 SRPRBQ9Y5M8 271 aaKnown RBP15.58■□□□□ 0.08
PAF1-202ENST00000416728 COL4A2P08572 1712 aa15.57■□□□□ 0.08
PAF1-202ENST00000416728 MYMKA6NI61 221 aa15.57■□□□□ 0.08
PAF1-202ENST00000416728 KPNA7A9QM74 516 aa15.57■□□□□ 0.08
PAF1-202ENST00000416728 SPECC1L-ADORA2AF8WAN1 911 aa15.57■□□□□ 0.08
PAF1-202ENST00000416728 PRAMEF12O95522 483 aa15.57■□□□□ 0.08
PAF1-202ENST00000416728 CTHP32929 405 aa15.57■□□□□ 0.08
PAF1-202ENST00000416728 PNPLA4P41247 253 aa15.57■□□□□ 0.08
PAF1-202ENST00000416728 RALGPS2Q86X27 583 aaPredicted RBP15.57■□□□□ 0.08
PAF1-202ENST00000416728 DCP1BQ8IZD4 617 aaKnown RBP15.57■□□□□ 0.08
PAF1-202ENST00000416728 SPEM1Q8N4L4 309 aa15.57■□□□□ 0.08
PAF1-202ENST00000416728 BPIFB1Q8TDL5 484 aa15.57■□□□□ 0.08
PAF1-202ENST00000416728 GIPC2Q8TF65 315 aa15.57■□□□□ 0.08
PAF1-202ENST00000416728 ZFYVE19Q96K21 471 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms