RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 ODC1P11926 461 aa10.89□□□□□ -0.67
MDC1-202ENST00000416571 PLS3P13797 630 aa10.89□□□□□ -0.67
MDC1-202ENST00000416571 TYMPP19971 482 aa10.89□□□□□ -0.67
MDC1-202ENST00000416571 GUCY2CP25092 1073 aa10.89□□□□□ -0.67
MDC1-202ENST00000416571 CDC25CP30307 473 aa10.89□□□□□ -0.67
MDC1-202ENST00000416571 HOXA6P31267 233 aa10.89□□□□□ -0.67
MDC1-202ENST00000416571 AARSP49588 968 aaKnown RBP eCLIP10.89□□□□□ -0.67
MDC1-202ENST00000416571 HMGN5P82970 282 aaKnown RBP10.89□□□□□ -0.67
MDC1-202ENST00000416571 MCL1Q07820 350 aa10.89□□□□□ -0.67
MDC1-202ENST00000416571 CCINQ13939 588 aa10.89□□□□□ -0.67
MDC1-202ENST00000416571 SF3A2Q15428 464 aaKnown RBP10.89□□□□□ -0.67
MDC1-202ENST00000416571 KYAT1Q16773 422 aa10.89□□□□□ -0.67
MDC1-202ENST00000416571 ITPRIPL2Q3MIP1 535 aa10.89□□□□□ -0.67
MDC1-202ENST00000416571 CENPPQ6IPU0 288 aa10.89□□□□□ -0.67
MDC1-202ENST00000416571 DTHD1Q6ZMT9 781 aa10.89□□□□□ -0.67
MDC1-202ENST00000416571 GAREM2Q75VX8 874 aa10.89□□□□□ -0.67
MDC1-202ENST00000416571 CACNA2D4Q7Z3S7 1137 aa10.89□□□□□ -0.67
MDC1-202ENST00000416571 C4orf32Q8N8J7 132 aa10.89□□□□□ -0.67
MDC1-202ENST00000416571 ATAD1Q8NBU5 361 aa10.89□□□□□ -0.67
MDC1-202ENST00000416571 TMEM161BQ8NDZ6 487 aa10.89□□□□□ -0.67
MDC1-202ENST00000416571 GAB3Q8WWW8 586 aa10.89□□□□□ -0.67
MDC1-202ENST00000416571 LOXL4Q96JB6 756 aa10.89□□□□□ -0.67
MDC1-202ENST00000416571 TMEM209Q96SK2 561 aa10.89□□□□□ -0.67
MDC1-202ENST00000416571 SEPT5Q99719 369 aaPredicted RBP10.89□□□□□ -0.67
MDC1-202ENST00000416571 LLPHQ9BRT6 129 aaKnown RBP10.89□□□□□ -0.67
MDC1-202ENST00000416571 NTPCRQ9BSD7 190 aaKnown RBP10.89□□□□□ -0.67
MDC1-202ENST00000416571 LARSQ9P2J5 1176 aaKnown RBP10.89□□□□□ -0.67
MDC1-202ENST00000416571 TTC26A0AVF1 554 aa10.88□□□□□ -0.67
MDC1-202ENST00000416571 SOAT2O75908 522 aa10.88□□□□□ -0.67
MDC1-202ENST00000416571 ZNF806P0C7X5 589 aa10.88□□□□□ -0.67
MDC1-202ENST00000416571 MAPTP10636 758 aaKnown RBP10.88□□□□□ -0.67
MDC1-202ENST00000416571 PAX3P23760 479 aa10.88□□□□□ -0.67
MDC1-202ENST00000416571 CDC25AP30304 524 aa10.88□□□□□ -0.67
MDC1-202ENST00000416571 PXNP49023 591 aaPredicted RBP10.88□□□□□ -0.67
MDC1-202ENST00000416571 TUFMP49411 452 aaKnown RBP10.88□□□□□ -0.67
MDC1-202ENST00000416571 MCM2P49736 904 aa10.88□□□□□ -0.67
MDC1-202ENST00000416571 LIG4P49917 911 aa10.88□□□□□ -0.67
MDC1-202ENST00000416571 LIMK1P53667 647 aa10.88□□□□□ -0.67
MDC1-202ENST00000416571 CYP4F8P98187 520 aa10.88□□□□□ -0.67
MDC1-202ENST00000416571 TNK2Q07912 1038 aa10.88□□□□□ -0.67
MDC1-202ENST00000416571 ST3GAL1Q11201 340 aa10.88□□□□□ -0.67
MDC1-202ENST00000416571 GRSF1Q12849 480 aaKnown RBP eCLIP10.88□□□□□ -0.67
MDC1-202ENST00000416571 MGAT5BQ3V5L5 792 aa10.88□□□□□ -0.67
MDC1-202ENST00000416571 TMEM130Q8N3G9 435 aa10.88□□□□□ -0.67
MDC1-202ENST00000416571 FAM212AQ96EL1 285 aa10.88□□□□□ -0.67
MDC1-202ENST00000416571 CDK5RAP3Q96JB5 506 aa10.88□□□□□ -0.67
MDC1-202ENST00000416571 TSPAN18Q96SJ8 248 aa10.88□□□□□ -0.67
MDC1-202ENST00000416571 MKNK1Q9BUB5 465 aa10.88□□□□□ -0.67
MDC1-202ENST00000416571 TASP1Q9H6P5 420 aa10.88□□□□□ -0.67
MDC1-202ENST00000416571 RPF1Q9H9Y2 349 aaKnown RBP10.88□□□□□ -0.67
MDC1-202ENST00000416571 C2orf42Q9NWW7 574 aa10.88□□□□□ -0.67
MDC1-202ENST00000416571 HSFX1Q9UBD0 423 aa10.88□□□□□ -0.67
MDC1-202ENST00000416571 DACH1Q9UI36 760 aa10.88□□□□□ -0.67
MDC1-202ENST00000416571 LIMCH1Q9UPQ0 1083 aa10.88□□□□□ -0.67
MDC1-202ENST00000416571 SLC8A2Q9UPR5 921 aa10.88□□□□□ -0.67
MDC1-202ENST00000416571 TSC2P49815 1807 aa10.88□□□□□ -0.67
MDC1-202ENST00000416571 SPAG17Q6Q759 2223 aa10.88□□□□□ -0.67
MDC1-202ENST00000416571 ZNF638Q14966 1978 aaKnown RBP10.87□□□□□ -0.67
MDC1-202ENST00000416571 CCDC163A0A0D9SF12 145 aa10.87□□□□□ -0.67
MDC1-202ENST00000416571 LACTBL1A8MY62 500 aa10.87□□□□□ -0.67
MDC1-202ENST00000416571 HNRNPDLO14979 420 aaKnown RBP10.87□□□□□ -0.67
MDC1-202ENST00000416571 EXTL3O43909 919 aa10.87□□□□□ -0.67
MDC1-202ENST00000416571 EPN2O95208 641 aa10.87□□□□□ -0.67
MDC1-202ENST00000416571 PRAMEF12O95522 483 aa10.87□□□□□ -0.67
MDC1-202ENST00000416571 WEE1P30291 646 aa10.87□□□□□ -0.67
MDC1-202ENST00000416571 AVPR1AP37288 418 aa10.87□□□□□ -0.67
MDC1-202ENST00000416571 PRPHP41219 470 aa10.87□□□□□ -0.67
MDC1-202ENST00000416571 TNFSF9P41273 254 aa10.87□□□□□ -0.67
MDC1-202ENST00000416571 GUCY2FP51841 1108 aa10.87□□□□□ -0.67
MDC1-202ENST00000416571 AMPD2Q01433 879 aa10.87□□□□□ -0.67
MDC1-202ENST00000416571 BFSP1Q12934 665 aa10.87□□□□□ -0.67
MDC1-202ENST00000416571 ZBTB6Q15916 424 aa10.87□□□□□ -0.67
MDC1-202ENST00000416571 CCDC6Q16204 474 aa10.87□□□□□ -0.67
MDC1-202ENST00000416571 SLC39A12Q504Y0 691 aa10.87□□□□□ -0.67
MDC1-202ENST00000416571 WDR44Q5JSH3 913 aa10.87□□□□□ -0.67
MDC1-202ENST00000416571 STPG1Q5TH74 334 aa10.87□□□□□ -0.67
MDC1-202ENST00000416571 KCNK18Q7Z418 384 aa10.87□□□□□ -0.67
MDC1-202ENST00000416571 METTL23Q86XA0 190 aa10.87□□□□□ -0.67
MDC1-202ENST00000416571 TTC9BQ8N6N2 239 aa10.87□□□□□ -0.67
MDC1-202ENST00000416571 EXOC4Q96A65 974 aa10.87□□□□□ -0.67
MDC1-202ENST00000416571 SENP8Q96LD8 212 aa10.87□□□□□ -0.67
MDC1-202ENST00000416571 LRRC3BQ96PB8 259 aa10.87□□□□□ -0.67
MDC1-202ENST00000416571 LPIN3Q9BQK8 851 aa10.87□□□□□ -0.67
MDC1-202ENST00000416571 KCND2Q9NZV8 630 aa10.87□□□□□ -0.67
MDC1-202ENST00000416571 ZMYM5Q9UJ78 669 aa10.87□□□□□ -0.67
MDC1-202ENST00000416571 PCDHB6Q9Y5E3 794 aa10.87□□□□□ -0.67
MDC1-202ENST00000416571 TCHHQ07283 1943 aa10.87□□□□□ -0.67
MDC1-202ENST00000416571 ANK1P16157 1881 aa10.87□□□□□ -0.67
MDC1-202ENST00000416571 OGTO15294 1046 aa10.86□□□□□ -0.67
MDC1-202ENST00000416571 PMLP29590 882 aa10.86□□□□□ -0.67
MDC1-202ENST00000416571 NCKAP1LP55160 1127 aa10.86□□□□□ -0.67
MDC1-202ENST00000416571 LILRA4P59901 499 aa10.86□□□□□ -0.67
MDC1-202ENST00000416571 CACNB1Q02641 598 aaPredicted RBP10.86□□□□□ -0.67
MDC1-202ENST00000416571 RUNX3Q13761 415 aa10.86□□□□□ -0.67
MDC1-202ENST00000416571 N4BP2L1Q5TBK1 243 aaPredicted RBP10.86□□□□□ -0.67
MDC1-202ENST00000416571 SPATA1Q5VX52 437 aa10.86□□□□□ -0.67
MDC1-202ENST00000416571 CC2D1AQ6P1N0 951 aaPredicted RBP10.86□□□□□ -0.67
MDC1-202ENST00000416571 KBTBD6Q86V97 674 aa10.86□□□□□ -0.67
MDC1-202ENST00000416571 CD302Q8IX05 232 aa10.86□□□□□ -0.67
MDC1-202ENST00000416571 CMTM8Q8IZV2 173 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms