RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 PTCH2Q9Y6C5 1203 aa3.27□□□□□ -1.89
LINC00428-201ENST00000415620 FPGT-TNNI3KV9GXZ4 949 aa3.27□□□□□ -1.89
LINC00428-201ENST00000415620 ZSWIM8A7E2V4 1837 aa3.27□□□□□ -1.89
LINC00428-201ENST00000415620 NFAT5O94916 1531 aa3.27□□□□□ -1.89
LINC00428-201ENST00000415620 MYH14Q7Z406 1995 aaKnown RBP3.27□□□□□ -1.89
LINC00428-201ENST00000415620 DMDP11532 3685 aa3.26□□□□□ -1.89
LINC00428-201ENST00000415620 ADGRF5Q8IZF2 1346 aa3.26□□□□□ -1.89
LINC00428-201ENST00000415620 ATRXP46100 2492 aa3.26□□□□□ -1.89
LINC00428-201ENST00000415620 WDR91A4D1P6 747 aa3.26□□□□□ -1.89
LINC00428-201ENST00000415620 MGST3O14880 152 aa3.26□□□□□ -1.89
LINC00428-201ENST00000415620 KCNAB3O43448 404 aa3.26□□□□□ -1.89
LINC00428-201ENST00000415620 FOSP01100 380 aaPredicted RBP3.26□□□□□ -1.89
LINC00428-201ENST00000415620 GYS1P13807 737 aa3.26□□□□□ -1.89
LINC00428-201ENST00000415620 FDXRP22570 491 aa3.26□□□□□ -1.89
LINC00428-201ENST00000415620 HUNKP57058 714 aa3.26□□□□□ -1.89
LINC00428-201ENST00000415620 APBA1Q02410 837 aa3.26□□□□□ -1.89
LINC00428-201ENST00000415620 LRRC32Q14392 662 aa3.26□□□□□ -1.89
LINC00428-201ENST00000415620 BMT2Q1RMZ1 405 aa3.26□□□□□ -1.89
LINC00428-201ENST00000415620 KIAA1614Q5VZ46 1190 aa3.26□□□□□ -1.89
LINC00428-201ENST00000415620 DLK2Q6UY11 383 aa3.26□□□□□ -1.89
LINC00428-201ENST00000415620 C1QTNF1Q9BXJ1 281 aa3.26□□□□□ -1.89
LINC00428-201ENST00000415620 ALOXE3Q9BYJ1 711 aa3.26□□□□□ -1.89
LINC00428-201ENST00000415620 GLIS2Q9BZE0 524 aaPredicted RBP3.26□□□□□ -1.89
LINC00428-201ENST00000415620 OXSMQ9NWU1 459 aa3.26□□□□□ -1.89
LINC00428-201ENST00000415620 SLC17A6Q9P2U8 582 aa3.26□□□□□ -1.89
LINC00428-201ENST00000415620 MAP3K2Q9Y2U5 619 aa3.26□□□□□ -1.89
LINC00428-201ENST00000415620 SPTBN4Q9H254 2564 aa3.26□□□□□ -1.89
LINC00428-201ENST00000415620 CHD8Q9HCK8 2581 aa3.26□□□□□ -1.89
LINC00428-201ENST00000415620 COL4A5P29400 1685 aa3.26□□□□□ -1.89
LINC00428-201ENST00000415620 ARHGEF17Q96PE2 2063 aaPredicted RBP3.26□□□□□ -1.89
LINC00428-201ENST00000415620 POLR3AO14802 1390 aaPredicted RBP3.25□□□□□ -1.89
LINC00428-201ENST00000415620 CARMIL3Q8ND23 1372 aa3.25□□□□□ -1.89
LINC00428-201ENST00000415620 ADGRB1O14514 1584 aa3.25□□□□□ -1.89
LINC00428-201ENST00000415620 EPG5Q9HCE0 2579 aa3.25□□□□□ -1.89
LINC00428-201ENST00000415620 ZNF292O60281 2723 aa3.25□□□□□ -1.89
LINC00428-201ENST00000415620 CDKL5O76039 1030 aa3.25□□□□□ -1.89
LINC00428-201ENST00000415620 ELANEP08246 267 aa3.25□□□□□ -1.89
LINC00428-201ENST00000415620 CBSLP0DN79 551 aa3.25□□□□□ -1.89
LINC00428-201ENST00000415620 CD40P25942 277 aa3.25□□□□□ -1.89
LINC00428-201ENST00000415620 CBSP35520 551 aa3.25□□□□□ -1.89
LINC00428-201ENST00000415620 RBL2Q08999 1139 aa3.25□□□□□ -1.89
LINC00428-201ENST00000415620 UBE3CQ15386 1083 aa3.25□□□□□ -1.89
LINC00428-201ENST00000415620 LRIT3Q3SXY7 679 aa3.25□□□□□ -1.89
LINC00428-201ENST00000415620 C19orf54Q5BKX5 351 aa3.25□□□□□ -1.89
LINC00428-201ENST00000415620 AGAP9Q5VTM2 703 aa3.25□□□□□ -1.89
LINC00428-201ENST00000415620 RGMBQ6NW40 437 aa3.25□□□□□ -1.89
LINC00428-201ENST00000415620 EFCAB12Q6NXP0 572 aa3.25□□□□□ -1.89
LINC00428-201ENST00000415620 GPR149Q86SP6 731 aa3.25□□□□□ -1.89
LINC00428-201ENST00000415620 SLC41A1Q8IVJ1 513 aa3.25□□□□□ -1.89
LINC00428-201ENST00000415620 USP38Q8NB14 1042 aa3.25□□□□□ -1.89
LINC00428-201ENST00000415620 SPATA3Q8NHX4 192 aa3.25□□□□□ -1.89
LINC00428-201ENST00000415620 MKL1Q969V6 931 aa3.25□□□□□ -1.89
LINC00428-201ENST00000415620 ARMC5Q96C12 935 aa3.25□□□□□ -1.89
LINC00428-201ENST00000415620 PDLIM2Q96JY6 352 aa3.25□□□□□ -1.89
LINC00428-201ENST00000415620 Q96MF0 132 aa3.25□□□□□ -1.89
LINC00428-201ENST00000415620 TAOK3Q9H2K8 898 aa3.25□□□□□ -1.89
LINC00428-201ENST00000415620 TOMM22Q9NS69 142 aa3.25□□□□□ -1.89
LINC00428-201ENST00000415620 POGKQ9P215 609 aa3.25□□□□□ -1.89
LINC00428-201ENST00000415620 LRIT1Q9P2V4 623 aa3.25□□□□□ -1.89
LINC00428-201ENST00000415620 TMPRSS11EQ9UL52 423 aa3.25□□□□□ -1.89
LINC00428-201ENST00000415620 USP15Q9Y4E8 981 aaPredicted RBP3.25□□□□□ -1.89
LINC00428-201ENST00000415620 TRIM17Q9Y577 477 aa3.25□□□□□ -1.89
LINC00428-201ENST00000415620 ZNF646O15015 1829 aaPredicted RBP3.25□□□□□ -1.89
LINC00428-201ENST00000415620 PIK3C2GO75747 1445 aa3.25□□□□□ -1.89
LINC00428-201ENST00000415620 TRANK1O15050 2925 aa3.25□□□□□ -1.89
LINC00428-201ENST00000415620 ASPMQ8IZT6 3477 aa3.25□□□□□ -1.89
LINC00428-201ENST00000415620 ANKRD11Q6UB99 2663 aaPredicted RBP3.25□□□□□ -1.89
LINC00428-201ENST00000415620 TTC21AQ8NDW8 1320 aa3.24□□□□□ -1.89
LINC00428-201ENST00000415620 ZDBF2Q9HCK1 2354 aa3.24□□□□□ -1.89
LINC00428-201ENST00000415620 COL2A1P02458 1487 aaPredicted RBP3.24□□□□□ -1.89
LINC00428-201ENST00000415620 WIPF3A6NGB9 483 aa3.24□□□□□ -1.89
LINC00428-201ENST00000415620 OPA1O60313 960 aa3.24□□□□□ -1.89
LINC00428-201ENST00000415620 NRP2O60462 931 aa3.24□□□□□ -1.89
LINC00428-201ENST00000415620 TMEM127O75204 238 aa3.24□□□□□ -1.89
LINC00428-201ENST00000415620 LTA4HP09960 611 aaKnown RBP3.24□□□□□ -1.89
LINC00428-201ENST00000415620 CLEC2LP0C7M8 214 aa3.24□□□□□ -1.89
LINC00428-201ENST00000415620 ATP2A2P16615 1042 aaKnown RBP3.24□□□□□ -1.89
LINC00428-201ENST00000415620 OCA2Q04671 838 aa3.24□□□□□ -1.89
LINC00428-201ENST00000415620 ITPK1Q13572 414 aa3.24□□□□□ -1.89
LINC00428-201ENST00000415620 SPDYE7PQ495Y7 208 aa3.24□□□□□ -1.89
LINC00428-201ENST00000415620 GPR158Q5T848 1215 aa3.24□□□□□ -1.89
LINC00428-201ENST00000415620 B3GNTL1Q67FW5 361 aaPredicted RBP3.24□□□□□ -1.89
LINC00428-201ENST00000415620 CDCA2Q69YH5 1023 aaPredicted RBP3.24□□□□□ -1.89
LINC00428-201ENST00000415620 Q6ZNX1 250 aa3.24□□□□□ -1.89
LINC00428-201ENST00000415620 ESPNLQ6ZVH7 1005 aa3.24□□□□□ -1.89
LINC00428-201ENST00000415620 LYSMD2Q8IV50 215 aa3.24□□□□□ -1.89
LINC00428-201ENST00000415620 RHOT2Q8IXI1 618 aa3.24□□□□□ -1.89
LINC00428-201ENST00000415620 EFHBQ8N7U6 833 aa3.24□□□□□ -1.89
LINC00428-201ENST00000415620 GAB3Q8WWW8 586 aa3.24□□□□□ -1.89
LINC00428-201ENST00000415620 CEP95Q96GE4 821 aa3.24□□□□□ -1.89
LINC00428-201ENST00000415620 ZNF496Q96IT1 587 aaPredicted RBP3.24□□□□□ -1.89
LINC00428-201ENST00000415620 ZNF333Q96JL9 665 aa3.24□□□□□ -1.89
LINC00428-201ENST00000415620 UHRF1Q96T88 793 aaPredicted RBP3.24□□□□□ -1.89
LINC00428-201ENST00000415620 CDX2Q99626 313 aaPredicted RBP3.24□□□□□ -1.89
LINC00428-201ENST00000415620 KRTAP2-2Q9BYT5 123 aa3.24□□□□□ -1.89
LINC00428-201ENST00000415620 KLK15Q9H2R5 256 aa3.24□□□□□ -1.89
LINC00428-201ENST00000415620 EPHX3Q9H6B9 360 aa3.24□□□□□ -1.89
LINC00428-201ENST00000415620 TMEM74BQ9NUR3 256 aa3.24□□□□□ -1.89
LINC00428-201ENST00000415620 H2AFY2Q9P0M6 372 aaPredicted RBP3.24□□□□□ -1.89
LINC00428-201ENST00000415620 EIF3AQ14152 1382 aaKnown RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms