RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 MARCH11A6NNE9 402 aa5.56□□□□□ -1.52
PTPRK-209ENST00000415046 NDUFA10O95299 355 aa5.56□□□□□ -1.52
PTPRK-209ENST00000415046 NUDT3O95989 172 aa5.56□□□□□ -1.52
PTPRK-209ENST00000415046 RBP3P10745 1247 aa5.56□□□□□ -1.52
PTPRK-209ENST00000415046 CYP19A1P11511 503 aaPredicted RBP5.56□□□□□ -1.52
PTPRK-209ENST00000415046 FLT3LGP49771 235 aa5.56□□□□□ -1.52
PTPRK-209ENST00000415046 SESN3P58005 492 aa5.56□□□□□ -1.52
PTPRK-209ENST00000415046 KRT24Q2M2I5 525 aa5.56□□□□□ -1.52
PTPRK-209ENST00000415046 MST1LQ2TV78 715 aa5.56□□□□□ -1.52
PTPRK-209ENST00000415046 MFSD14BQ5SR56 506 aa5.56□□□□□ -1.52
PTPRK-209ENST00000415046 PRAMEF14Q5SWL7 426 aa5.56□□□□□ -1.52
PTPRK-209ENST00000415046 EFCAB12Q6NXP0 572 aa5.56□□□□□ -1.52
PTPRK-209ENST00000415046 PDZD4Q76G19 769 aaPredicted RBP5.56□□□□□ -1.52
PTPRK-209ENST00000415046 COL23A1Q86Y22 540 aaPredicted RBP5.56□□□□□ -1.52
PTPRK-209ENST00000415046 CLRN3Q8NCR9 226 aa5.56□□□□□ -1.52
PTPRK-209ENST00000415046 TFAP2CQ92754 450 aa5.56□□□□□ -1.52
PTPRK-209ENST00000415046 USP7Q93009 1102 aa5.56□□□□□ -1.52
PTPRK-209ENST00000415046 TSR2Q969E8 191 aaKnown RBP5.56□□□□□ -1.52
PTPRK-209ENST00000415046 EAF2Q96CJ1 260 aaPredicted RBP5.56□□□□□ -1.52
PTPRK-209ENST00000415046 ACAP3Q96P50 834 aa5.56□□□□□ -1.52
PTPRK-209ENST00000415046 TEX101Q9BY14 249 aa5.56□□□□□ -1.52
PTPRK-209ENST00000415046 WDR11Q9BZH6 1224 aa5.56□□□□□ -1.52
PTPRK-209ENST00000415046 ANKFY1Q9P2R3 1169 aa5.56□□□□□ -1.52
PTPRK-209ENST00000415046 ZBTB1Q9Y2K1 713 aa5.56□□□□□ -1.52
PTPRK-209ENST00000415046 PCSK5Q92824 1860 aa5.56□□□□□ -1.52
PTPRK-209ENST00000415046 NRXN2Q9P2S2 1712 aa5.55□□□□□ -1.52
PTPRK-209ENST00000415046 NEMP1O14524 444 aa5.55□□□□□ -1.52
PTPRK-209ENST00000415046 ZNF185O15231 689 aa5.55□□□□□ -1.52
PTPRK-209ENST00000415046 ZEB2O60315 1214 aa5.55□□□□□ -1.52
PTPRK-209ENST00000415046 STARD3NLO95772 234 aa5.55□□□□□ -1.52
PTPRK-209ENST00000415046 A1BGP04217 495 aa5.55□□□□□ -1.52
PTPRK-209ENST00000415046 SNRPA1P09661 255 aaKnown RBP5.55□□□□□ -1.52
PTPRK-209ENST00000415046 SPATA31D3P0C874 917 aa5.55□□□□□ -1.52
PTPRK-209ENST00000415046 EIF2S2P20042 333 aaKnown RBP5.55□□□□□ -1.52
PTPRK-209ENST00000415046 ENPP1P22413 925 aa5.55□□□□□ -1.52
PTPRK-209ENST00000415046 EIF4A1P60842 406 aaKnown RBP5.55□□□□□ -1.52
PTPRK-209ENST00000415046 GNAI1P63096 354 aa5.55□□□□□ -1.52
PTPRK-209ENST00000415046 UGT8Q16880 541 aa5.55□□□□□ -1.52
PTPRK-209ENST00000415046 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.55□□□□□ -1.52
PTPRK-209ENST00000415046 PDCD4Q53EL6 469 aaKnown RBP5.55□□□□□ -1.52
PTPRK-209ENST00000415046 FAM102AQ5T9C2 384 aaPredicted RBP5.55□□□□□ -1.52
PTPRK-209ENST00000415046 METRNLQ641Q3 311 aa5.55□□□□□ -1.52
PTPRK-209ENST00000415046 SPATA31D4Q6ZUB0 917 aa5.55□□□□□ -1.52
PTPRK-209ENST00000415046 RNF180Q86T96 592 aa5.55□□□□□ -1.52
PTPRK-209ENST00000415046 NGEFQ8N5V2 710 aa5.55□□□□□ -1.52
PTPRK-209ENST00000415046 RNF169Q8NCN4 708 aa5.55□□□□□ -1.52
PTPRK-209ENST00000415046 ZFP28Q8NHY6 868 aa5.55□□□□□ -1.52
PTPRK-209ENST00000415046 IFT22Q9H7X7 185 aa5.55□□□□□ -1.52
PTPRK-209ENST00000415046 SYBUQ9NX95 663 aa5.55□□□□□ -1.52
PTPRK-209ENST00000415046 SRP68Q9UHB9 627 aaKnown RBP5.55□□□□□ -1.52
PTPRK-209ENST00000415046 USP16Q9Y5T5 823 aa5.55□□□□□ -1.52
PTPRK-209ENST00000415046 ARFGEF1Q9Y6D6 1849 aa5.55□□□□□ -1.52
PTPRK-209ENST00000415046 DDX60Q8IY21 1712 aaKnown RBP5.54□□□□□ -1.52
PTPRK-209ENST00000415046 SOS1Q07889 1333 aaPredicted RBP5.54□□□□□ -1.52
PTPRK-209ENST00000415046 RPTORQ8N122 1335 aa5.54□□□□□ -1.52
PTPRK-209ENST00000415046 CHL1O00533 1208 aa5.54□□□□□ -1.52
PTPRK-209ENST00000415046 PJA2O43164 708 aa5.54□□□□□ -1.52
PTPRK-209ENST00000415046 ADCY6O43306 1168 aa5.54□□□□□ -1.52
PTPRK-209ENST00000415046 PHF2O75151 1096 aa5.54□□□□□ -1.52
PTPRK-209ENST00000415046 ULK1O75385 1050 aa5.54□□□□□ -1.52
PTPRK-209ENST00000415046 ANXA1P04083 346 aa5.54□□□□□ -1.52
PTPRK-209ENST00000415046 MYL6BP14649 208 aa5.54□□□□□ -1.52
PTPRK-209ENST00000415046 RFC4P35249 363 aa5.54□□□□□ -1.52
PTPRK-209ENST00000415046 ID4P47928 161 aa5.54□□□□□ -1.52
PTPRK-209ENST00000415046 USP14P54578 494 aa5.54□□□□□ -1.52
PTPRK-209ENST00000415046 CALD1Q05682 793 aaKnown RBP5.54□□□□□ -1.52
PTPRK-209ENST00000415046 OLFML1Q6UWY5 402 aa5.54□□□□□ -1.52
PTPRK-209ENST00000415046 THNSL2Q86YJ6 484 aa5.54□□□□□ -1.52
PTPRK-209ENST00000415046 CPEB3Q8NE35 698 aaKnown RBP5.54□□□□□ -1.52
PTPRK-209ENST00000415046 SUPT20HQ8NEM7 779 aa5.54□□□□□ -1.52
PTPRK-209ENST00000415046 RAX2Q96IS3 184 aa5.54□□□□□ -1.52
PTPRK-209ENST00000415046 COQ10AQ96MF6 247 aa5.54□□□□□ -1.52
PTPRK-209ENST00000415046 NEU1Q99519 415 aa5.54□□□□□ -1.52
PTPRK-209ENST00000415046 ADAM2Q99965 735 aa5.54□□□□□ -1.52
PTPRK-209ENST00000415046 TEX13AQ9BXU3 409 aaPredicted RBP5.54□□□□□ -1.52
PTPRK-209ENST00000415046 RIOX1Q9H6W3 641 aa5.54□□□□□ -1.52
PTPRK-209ENST00000415046 SYNPO2LQ9H987 977 aa5.54□□□□□ -1.52
PTPRK-209ENST00000415046 ZNHIT2Q9UHR6 403 aa5.54□□□□□ -1.52
PTPRK-209ENST00000415046 APOBEC2Q9Y235 224 aaKnown RBP5.54□□□□□ -1.52
PTPRK-209ENST00000415046 SRCAPQ6ZRS2 3230 aa5.54□□□□□ -1.52
PTPRK-209ENST00000415046 TNRC6CQ9HCJ0 1690 aaKnown RBP5.53□□□□□ -1.52
PTPRK-209ENST00000415046 ZAR1LA6NP61 321 aa5.53□□□□□ -1.52
PTPRK-209ENST00000415046 TCERG1O14776 1098 aaKnown RBP5.53□□□□□ -1.52
PTPRK-209ENST00000415046 TYRP1P17643 537 aa5.53□□□□□ -1.52
PTPRK-209ENST00000415046 DDX6P26196 483 aaKnown RBP eCLIP5.53□□□□□ -1.521e-7■■■■■ 60
PTPRK-209ENST00000415046 HMGB2P26583 209 aaKnown RBP5.53□□□□□ -1.52
PTPRK-209ENST00000415046 AVPR1BP47901 424 aa5.53□□□□□ -1.52
PTPRK-209ENST00000415046 GUCY1B3Q02153 619 aa5.53□□□□□ -1.52
PTPRK-209ENST00000415046 TRMT2AQ8IZ69 625 aaKnown RBP5.53□□□□□ -1.52
PTPRK-209ENST00000415046 FAM177A1Q8N128 213 aaPredicted RBP5.53□□□□□ -1.52
PTPRK-209ENST00000415046 LINC00476Q8WZB0 136 aa5.53□□□□□ -1.52
PTPRK-209ENST00000415046 VOPP1Q96AW1 172 aa5.53□□□□□ -1.52
PTPRK-209ENST00000415046 TTC1Q99614 292 aa5.53□□□□□ -1.52
PTPRK-209ENST00000415046 DPP7Q9UHL4 492 aa5.53□□□□□ -1.52
PTPRK-209ENST00000415046 SBF1O95248 1867 aa5.53□□□□□ -1.52
PTPRK-209ENST00000415046 USP42Q9H9J4 1324 aaKnown RBP5.52□□□□□ -1.53
PTPRK-209ENST00000415046 FANCIQ9NVI1 1328 aa5.52□□□□□ -1.53
PTPRK-209ENST00000415046 HLA-DOAP06340 250 aa5.52□□□□□ -1.53
PTPRK-209ENST00000415046 ZNF853P0CG23 659 aa5.52□□□□□ -1.53
PTPRK-209ENST00000415046 EIF5P55010 431 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms