RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 PIGRP01833 764 aa18.25■□□□□ 0.51
SCAMP4-204ENST00000414057 PRKCSHP14314 528 aaPredicted RBP18.25■□□□□ 0.51
SCAMP4-204ENST00000414057 CYP3A5P20815 502 aa18.25■□□□□ 0.51
SCAMP4-204ENST00000414057 COPB1P53618 953 aaKnown RBP18.25■□□□□ 0.51
SCAMP4-204ENST00000414057 MARSP56192 900 aaKnown RBP18.25■□□□□ 0.51
SCAMP4-204ENST00000414057 VARS2Q5ST30 1063 aaKnown RBP18.25■□□□□ 0.51
SCAMP4-204ENST00000414057 SLC8B1Q6J4K2 584 aa18.25■□□□□ 0.51
SCAMP4-204ENST00000414057 GRASPQ7Z6J2 395 aaPredicted RBP18.25■□□□□ 0.51
SCAMP4-204ENST00000414057 ZNF461Q8TAF7 563 aa18.25■□□□□ 0.51
SCAMP4-204ENST00000414057 RTN4Q9NQC3 1192 aaKnown RBP18.25■□□□□ 0.51
SCAMP4-204ENST00000414057 UBQLN1Q9UMX0 589 aaKnown RBP18.25■□□□□ 0.51
SCAMP4-204ENST00000414057 TRIOO75962 3097 aa18.25■□□□□ 0.51
SCAMP4-204ENST00000414057 SLC16A3O15427 465 aaKnown RBP18.24■□□□□ 0.51
SCAMP4-204ENST00000414057 CCL16O15467 120 aa18.24■□□□□ 0.51
SCAMP4-204ENST00000414057 ADAM9Q13443 819 aa18.24■□□□□ 0.51
SCAMP4-204ENST00000414057 SEZ6Q53EL9 994 aa18.24■□□□□ 0.51
SCAMP4-204ENST00000414057 ZC2HC1CQ53FD0 456 aaPredicted RBP18.24■□□□□ 0.51
SCAMP4-204ENST00000414057 ASTLQ6HA08 431 aaPredicted RBP18.24■□□□□ 0.51
SCAMP4-204ENST00000414057 ALYREFQ86V81 257 aaKnown RBP18.24■□□□□ 0.51
SCAMP4-204ENST00000414057 VSTM4Q8IW00 320 aa18.24■□□□□ 0.51
SCAMP4-204ENST00000414057 CD302Q8IX05 232 aa18.24■□□□□ 0.51
SCAMP4-204ENST00000414057 C18orf25Q96B23 403 aaPredicted RBP18.24■□□□□ 0.51
SCAMP4-204ENST00000414057 SUSD3Q96L08 255 aa18.24■□□□□ 0.51
SCAMP4-204ENST00000414057 TUBGCP2Q9BSJ2 902 aa18.24■□□□□ 0.51
SCAMP4-204ENST00000414057 RPF1Q9H9Y2 349 aaKnown RBP18.24■□□□□ 0.51
SCAMP4-204ENST00000414057 WNT16Q9UBV4 365 aa18.24■□□□□ 0.51
SCAMP4-204ENST00000414057 TTC26A0AVF1 554 aa18.23■□□□□ 0.51
SCAMP4-204ENST00000414057 OGTO15294 1046 aa18.23■□□□□ 0.51
SCAMP4-204ENST00000414057 TGFB1I1O43294 461 aa18.23■□□□□ 0.51
SCAMP4-204ENST00000414057 CXCL8P10145 99 aa18.23■□□□□ 0.51
SCAMP4-204ENST00000414057 SRFP11831 508 aa18.23■□□□□ 0.51
SCAMP4-204ENST00000414057 NR2F2P24468 414 aa18.23■□□□□ 0.51
SCAMP4-204ENST00000414057 IGFBP6P24592 240 aaPredicted RBP18.23■□□□□ 0.51
SCAMP4-204ENST00000414057 MTIF2P46199 727 aaKnown RBP18.23■□□□□ 0.51
SCAMP4-204ENST00000414057 GSDMDP57764 484 aa18.23■□□□□ 0.51
SCAMP4-204ENST00000414057 ZNF280DQ6N043 979 aa18.23■□□□□ 0.51
SCAMP4-204ENST00000414057 SLC9A9Q8IVB4 645 aa18.23■□□□□ 0.51
SCAMP4-204ENST00000414057 C12orf56Q8IXR9 622 aa18.23■□□□□ 0.51
SCAMP4-204ENST00000414057 SYCP3Q8IZU3 236 aa18.23■□□□□ 0.51
SCAMP4-204ENST00000414057 SLC44A3Q8N4M1 653 aa18.23■□□□□ 0.51
SCAMP4-204ENST00000414057 KIF12Q96FN5 646 aa18.23■□□□□ 0.51
SCAMP4-204ENST00000414057 OXCT2Q9BYC2 517 aaPredicted RBP18.23■□□□□ 0.51
SCAMP4-204ENST00000414057 CDH7Q9ULB5 785 aa18.23■□□□□ 0.51
SCAMP4-204ENST00000414057 C2orf16Q68DN1 1984 aa18.23■□□□□ 0.51
SCAMP4-204ENST00000414057 MTCL1Q9Y4B5 1905 aaKnown RBP18.22■□□□□ 0.51
SCAMP4-204ENST00000414057 LRG1P02750 347 aa18.22■□□□□ 0.51
SCAMP4-204ENST00000414057 NR3C1P04150 777 aa18.22■□□□□ 0.51
SCAMP4-204ENST00000414057 PAX3P23760 479 aa18.22■□□□□ 0.51
SCAMP4-204ENST00000414057 LRPAP1P30533 357 aa18.22■□□□□ 0.51
SCAMP4-204ENST00000414057 ROR1Q01973 937 aa18.22■□□□□ 0.51
SCAMP4-204ENST00000414057 TCF15Q12870 199 aa18.22■□□□□ 0.51
SCAMP4-204ENST00000414057 TPGS2Q68CL5 300 aa18.22■□□□□ 0.51
SCAMP4-204ENST00000414057 SLFN12LQ6IEE8 588 aa18.22■□□□□ 0.51
SCAMP4-204ENST00000414057 RSPO2Q6UXX9 243 aaPredicted RBP18.22■□□□□ 0.51
SCAMP4-204ENST00000414057 MTSS1LQ765P7 747 aa18.22■□□□□ 0.51
SCAMP4-204ENST00000414057 MAP4K3Q8IVH8 894 aa18.22■□□□□ 0.51
SCAMP4-204ENST00000414057 SPC24Q8NBT2 197 aa18.22■□□□□ 0.51
SCAMP4-204ENST00000414057 FLCNQ8NFG4 579 aa18.22■□□□□ 0.51
SCAMP4-204ENST00000414057 RTP3Q9BQQ7 232 aa18.22■□□□□ 0.51
SCAMP4-204ENST00000414057 MKNK1Q9BUB5 465 aa18.22■□□□□ 0.51
SCAMP4-204ENST00000414057 MSTO1Q9BUK6 570 aa18.22■□□□□ 0.51
SCAMP4-204ENST00000414057 METTL14Q9HCE5 456 aaKnown RBP18.22■□□□□ 0.51
SCAMP4-204ENST00000414057 INTS13Q9NVM9 706 aa18.22■□□□□ 0.51
SCAMP4-204ENST00000414057 MAFFQ9ULX9 164 aa18.22■□□□□ 0.51
SCAMP4-204ENST00000414057 ITIH6Q6UXX5 1313 aa18.22■□□□□ 0.51
SCAMP4-204ENST00000414057 LGALS16A8MUM7 142 aa18.21■□□□□ 0.51
SCAMP4-204ENST00000414057 ANHXE9PGG2 379 aa18.21■□□□□ 0.51
SCAMP4-204ENST00000414057 PRRG1O14668 218 aa18.21■□□□□ 0.51
SCAMP4-204ENST00000414057 GALR2O43603 387 aaPredicted RBP18.21■□□□□ 0.51
SCAMP4-204ENST00000414057 ABLIM3O94929 683 aa18.21■□□□□ 0.51
SCAMP4-204ENST00000414057 ATF2P15336 505 aa18.21■□□□□ 0.51
SCAMP4-204ENST00000414057 ARPP19P56211 112 aa18.21■□□□□ 0.51
SCAMP4-204ENST00000414057 KCNA1Q09470 495 aa18.21■□□□□ 0.51
SCAMP4-204ENST00000414057 MRPL58Q14197 206 aaKnown RBP18.21■□□□□ 0.51
SCAMP4-204ENST00000414057 MAN2A1Q16706 1144 aa18.21■□□□□ 0.51
SCAMP4-204ENST00000414057 CCDC40Q4G0X9 1142 aa18.21■□□□□ 0.51
SCAMP4-204ENST00000414057 CTXN3Q4LDR2 81 aa18.21■□□□□ 0.51
SCAMP4-204ENST00000414057 PABPC1LQ4VXU2 614 aaKnown RBP18.21■□□□□ 0.51
SCAMP4-204ENST00000414057 SPECC1LQ69YQ0 1117 aa18.21■□□□□ 0.51
SCAMP4-204ENST00000414057 FRMD5Q7Z6J6 570 aa18.21■□□□□ 0.51
SCAMP4-204ENST00000414057 CREBRFQ8IUR6 639 aa18.21■□□□□ 0.51
SCAMP4-204ENST00000414057 SIX5Q8N196 739 aa18.21■□□□□ 0.51
SCAMP4-204ENST00000414057 RSAD2Q8WXG1 361 aa18.21■□□□□ 0.51
SCAMP4-204ENST00000414057 HAPLN2Q9GZV7 340 aa18.21■□□□□ 0.51
SCAMP4-204ENST00000414057 TAB2Q9NYJ8 693 aa18.21■□□□□ 0.51
SCAMP4-204ENST00000414057 TUBGCP4Q9UGJ1 667 aa18.21■□□□□ 0.51
SCAMP4-204ENST00000414057 PCDHB8Q9UN66 801 aa18.21■□□□□ 0.51
SCAMP4-204ENST00000414057 ZNF318Q5VUA4 2279 aa18.21■□□□□ 0.51
SCAMP4-204ENST00000414057 A0A0B4J269 797 aa18.2■□□□□ 0.5
SCAMP4-204ENST00000414057 A0A1W2PQC6 194 aa18.2■□□□□ 0.5
SCAMP4-204ENST00000414057 MEFVO15553 781 aaPredicted RBP18.2■□□□□ 0.5
SCAMP4-204ENST00000414057 CFHP08603 1231 aa18.2■□□□□ 0.5
SCAMP4-204ENST00000414057 RFX1P22670 979 aa18.2■□□□□ 0.5
SCAMP4-204ENST00000414057 ZBTB6Q15916 424 aa18.2■□□□□ 0.5
SCAMP4-204ENST00000414057 TMC6Q7Z403 805 aa18.2■□□□□ 0.5
SCAMP4-204ENST00000414057 BEST2Q8NFU1 509 aa18.2■□□□□ 0.5
SCAMP4-204ENST00000414057 FGF13Q92913 245 aa18.2■□□□□ 0.5
SCAMP4-204ENST00000414057 VPS16Q9H269 839 aa18.2■□□□□ 0.5
SCAMP4-204ENST00000414057 AGPAT3Q9NRZ7 376 aa18.2■□□□□ 0.5
SCAMP4-204ENST00000414057 FBXL5Q9UKA1 691 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms