RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 CLDN10P78369 228 aa12.86□□□□□ -0.35
NEDD1-202ENST00000411739 PUS10Q3MIT2 529 aaKnown RBP12.86□□□□□ -0.35
NEDD1-202ENST00000411739 DCAF17Q5H9S7 520 aaPredicted RBP12.86□□□□□ -0.35
NEDD1-202ENST00000411739 PPM1LQ5SGD2 360 aa12.86□□□□□ -0.35
NEDD1-202ENST00000411739 ATAT1Q5SQI0 421 aa12.86□□□□□ -0.35
NEDD1-202ENST00000411739 TCERG1LQ5VWI1 586 aa12.86□□□□□ -0.35
NEDD1-202ENST00000411739 GPR149Q86SP6 731 aa12.86□□□□□ -0.35
NEDD1-202ENST00000411739 TTC9BQ8N6N2 239 aa12.86□□□□□ -0.35
NEDD1-202ENST00000411739 MED15Q96RN5 788 aa12.86□□□□□ -0.35
NEDD1-202ENST00000411739 LPIN3Q9BQK8 851 aa12.86□□□□□ -0.35
NEDD1-202ENST00000411739 MRPL45Q9BRJ2 306 aaKnown RBP12.86□□□□□ -0.35
NEDD1-202ENST00000411739 HCFC1R1Q9NWW0 138 aa12.86□□□□□ -0.35
NEDD1-202ENST00000411739 ATP2C2O75185 946 aa12.86□□□□□ -0.35
NEDD1-202ENST00000411739 PDGFRBP09619 1106 aa12.86□□□□□ -0.35
NEDD1-202ENST00000411739 LMO2P25791 158 aa12.86□□□□□ -0.35
NEDD1-202ENST00000411739 ELF1P32519 619 aa12.86□□□□□ -0.35
NEDD1-202ENST00000411739 RAP1GAPP47736 663 aa12.86□□□□□ -0.35
NEDD1-202ENST00000411739 CDH8P55286 799 aa12.86□□□□□ -0.35
NEDD1-202ENST00000411739 ITIH3Q06033 890 aa12.86□□□□□ -0.35
NEDD1-202ENST00000411739 DUSP4Q13115 394 aa12.86□□□□□ -0.35
NEDD1-202ENST00000411739 PAK1Q13153 545 aa12.86□□□□□ -0.35
NEDD1-202ENST00000411739 NCOA4Q13772 614 aa12.86□□□□□ -0.35
NEDD1-202ENST00000411739 SLC39A12Q504Y0 691 aa12.86□□□□□ -0.35
NEDD1-202ENST00000411739 SCARA5Q6ZMJ2 495 aa12.86□□□□□ -0.35
NEDD1-202ENST00000411739 INTS8Q75QN2 995 aaKnown RBP12.86□□□□□ -0.35
NEDD1-202ENST00000411739 XYLT2Q9H1B5 865 aa12.86□□□□□ -0.35
NEDD1-202ENST00000411739 TMLHEQ9NVH6 421 aa12.86□□□□□ -0.35
NEDD1-202ENST00000411739 GDAP2Q9NXN4 497 aa12.86□□□□□ -0.35
NEDD1-202ENST00000411739 DDX43Q9NXZ2 648 aaKnown RBP12.86□□□□□ -0.35
NEDD1-202ENST00000411739 DLL1O00548 723 aa12.85□□□□□ -0.35
NEDD1-202ENST00000411739 ATF2P15336 505 aa12.85□□□□□ -0.35
NEDD1-202ENST00000411739 LRRC63Q05C16 580 aa12.85□□□□□ -0.35
NEDD1-202ENST00000411739 DPCR1Q3MIW9 517 aa12.85□□□□□ -0.35
NEDD1-202ENST00000411739 GRASPQ7Z6J2 395 aaPredicted RBP12.85□□□□□ -0.35
NEDD1-202ENST00000411739 CREBRFQ8IUR6 639 aa12.85□□□□□ -0.35
NEDD1-202ENST00000411739 ADGRF2Q8IZF7 708 aa12.85□□□□□ -0.35
NEDD1-202ENST00000411739 THEM5Q8N1Q8 247 aa12.85□□□□□ -0.35
NEDD1-202ENST00000411739 TAS1R2Q8TE23 839 aa12.85□□□□□ -0.35
NEDD1-202ENST00000411739 PRKD2Q9BZL6 878 aa12.85□□□□□ -0.35
NEDD1-202ENST00000411739 DSEQ9UL01 958 aa12.85□□□□□ -0.35
NEDD1-202ENST00000411739 FAM50BQ9Y247 325 aa12.85□□□□□ -0.35
NEDD1-202ENST00000411739 NME7Q9Y5B8 376 aa12.85□□□□□ -0.35
NEDD1-202ENST00000411739 MAPK13O15264 365 aa12.85□□□□□ -0.35
NEDD1-202ENST00000411739 HLA-DRAP01903 254 aa12.85□□□□□ -0.35
NEDD1-202ENST00000411739 PSMC1P62191 440 aaKnown RBP12.85□□□□□ -0.35
NEDD1-202ENST00000411739 ZP2Q05996 745 aa12.85□□□□□ -0.35
NEDD1-202ENST00000411739 ZACNQ401N2 412 aa12.85□□□□□ -0.35
NEDD1-202ENST00000411739 ZC3H3Q8IXZ2 948 aaKnown RBP12.85□□□□□ -0.35
NEDD1-202ENST00000411739 TRIML1Q8N9V2 468 aa12.85□□□□□ -0.35
NEDD1-202ENST00000411739 KBTBD7Q8WVZ9 684 aa12.85□□□□□ -0.35
NEDD1-202ENST00000411739 RIPOR3Q96MK2 946 aa12.85□□□□□ -0.35
NEDD1-202ENST00000411739 SRRTQ9BXP5 876 aaKnown RBP12.85□□□□□ -0.35
NEDD1-202ENST00000411739 SMYD3Q9H7B4 428 aa12.85□□□□□ -0.35
NEDD1-202ENST00000411739 MTCL1Q9Y4B5 1905 aaKnown RBP12.85□□□□□ -0.35
NEDD1-202ENST00000411739 OR6C75A6NL08 312 aa12.84□□□□□ -0.35
NEDD1-202ENST00000411739 PIK3CAP42336 1068 aa12.84□□□□□ -0.35
NEDD1-202ENST00000411739 ZNF699Q32M78 642 aa12.84□□□□□ -0.35
NEDD1-202ENST00000411739 KHSRPQ92945 711 aaKnown RBP eCLIP12.84□□□□□ -0.352e-6■■■■□ 20
NEDD1-202ENST00000411739 PHF7Q9BWX1 381 aaPredicted RBP12.84□□□□□ -0.35
NEDD1-202ENST00000411739 GTPBP4Q9BZE4 634 aaKnown RBP12.84□□□□□ -0.35
NEDD1-202ENST00000411739 ZCWPW1Q9H0M4 648 aa12.84□□□□□ -0.35
NEDD1-202ENST00000411739 AFF4Q9UHB7 1163 aaKnown RBP12.84□□□□□ -0.35
NEDD1-202ENST00000411739 DPP7Q9UHL4 492 aa12.84□□□□□ -0.35
NEDD1-202ENST00000411739 GTF3C4Q9UKN8 822 aa12.84□□□□□ -0.35
NEDD1-202ENST00000411739 TSC2P49815 1807 aa12.84□□□□□ -0.35
NEDD1-202ENST00000411739 C2orf16Q68DN1 1984 aa12.84□□□□□ -0.35
NEDD1-202ENST00000411739 MTMR11A4FU01 709 aa12.84□□□□□ -0.35
NEDD1-202ENST00000411739 IKBKBO14920 756 aa12.84□□□□□ -0.35
NEDD1-202ENST00000411739 TNNC1P63316 161 aa12.84□□□□□ -0.35
NEDD1-202ENST00000411739 GPR17Q13304 367 aa12.84□□□□□ -0.35
NEDD1-202ENST00000411739 ORC1Q13415 861 aa12.84□□□□□ -0.35
NEDD1-202ENST00000411739 CCDC40Q4G0X9 1142 aa12.84□□□□□ -0.35
NEDD1-202ENST00000411739 C15orf39Q6ZRI6 1047 aa12.84□□□□□ -0.35
NEDD1-202ENST00000411739 ADHFE1Q8IWW8 467 aa12.84□□□□□ -0.35
NEDD1-202ENST00000411739 GJD3Q8N144 294 aa12.84□□□□□ -0.35
NEDD1-202ENST00000411739 TOP6BLQ8N6T0 577 aa12.84□□□□□ -0.35
NEDD1-202ENST00000411739 STKLD1Q8NE28 680 aa12.84□□□□□ -0.35
NEDD1-202ENST00000411739 HDAC7Q8WUI4 952 aa12.84□□□□□ -0.35
NEDD1-202ENST00000411739 SEMA4DQ92854 862 aa12.84□□□□□ -0.35
NEDD1-202ENST00000411739 MKNK1Q9BUB5 465 aa12.84□□□□□ -0.35
NEDD1-202ENST00000411739 RHOBTB2Q9BYZ6 727 aa12.84□□□□□ -0.35
NEDD1-202ENST00000411739 SDCBP2Q9H190 292 aa12.84□□□□□ -0.35
NEDD1-202ENST00000411739 ABI2Q9NYB9 513 aaPredicted RBP12.84□□□□□ -0.35
NEDD1-202ENST00000411739 ARMCX3Q9UH62 379 aaPredicted RBP12.84□□□□□ -0.35
NEDD1-202ENST00000411739 INSL5Q9Y5Q6 135 aa12.84□□□□□ -0.35
NEDD1-202ENST00000411739 MYBPHLA2RUH7 354 aa12.83□□□□□ -0.36
NEDD1-202ENST00000411739 PAX3P23760 479 aa12.83□□□□□ -0.36
NEDD1-202ENST00000411739 MTHFRP42898 656 aa12.83□□□□□ -0.36
NEDD1-202ENST00000411739 AP3M2P53677 418 aa12.83□□□□□ -0.36
NEDD1-202ENST00000411739 TWF1Q12792 350 aa12.83□□□□□ -0.36
NEDD1-202ENST00000411739 CBWD6Q4V339 395 aa12.83□□□□□ -0.36
NEDD1-202ENST00000411739 HSP90AA4PQ58FG1 418 aa12.83□□□□□ -0.36
NEDD1-202ENST00000411739 CBWD3Q5JTY5 395 aa12.83□□□□□ -0.36
NEDD1-202ENST00000411739 CBWD5Q5RIA9 395 aa12.83□□□□□ -0.36
NEDD1-202ENST00000411739 TPGS2Q68CL5 300 aa12.83□□□□□ -0.36
NEDD1-202ENST00000411739 ELMSAN1Q6PJG2 1045 aa12.83□□□□□ -0.36
NEDD1-202ENST00000411739 OR6B3Q8NGW1 331 aa12.83□□□□□ -0.36
NEDD1-202ENST00000411739 GPR152Q8TDT2 470 aa12.83□□□□□ -0.36
NEDD1-202ENST00000411739 SYAP1Q96A49 352 aaPredicted RBP12.83□□□□□ -0.36
NEDD1-202ENST00000411739 APOBEC3GQ9HC16 384 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms