RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 DNAJC1Q96KC8 554 aaKnown RBP11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 GJD4Q96KN9 370 aaPredicted RBP11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 WWOXQ9NZC7 414 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 DIS3Q9Y2L1 958 aaKnown RBP11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 CDC42BPAQ5VT25 1732 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 CROCCQ5TZA2 2017 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 PSMD3O43242 534 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 COG2Q14746 738 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 PFKFB3Q16875 520 aaPredicted RBP11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 OTOAQ7RTW8 1153 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 FAM136AQ96C01 138 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 MOV10L1Q9BXT6 1211 aaKnown RBP11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 LZTS1Q9Y250 596 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 RNF103O00237 685 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 PRIM2P49643 509 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 ZNF177Q13360 481 aaPredicted RBP11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 CLEC4GQ6UXB4 293 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 IFNEQ86WN2 208 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 MRPL1Q9BYD6 325 aaKnown RBP11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 GALNT8Q9NY28 637 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 NRKQ7Z2Y5 1582 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 PP2D1A8MPX8 630 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 CKMP06732 381 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 MYBL1P10243 752 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 CCDC137Q6PK04 289 aaKnown RBP11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 TRIM72Q6ZMU5 477 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 UBA3Q8TBC4 463 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 AKAP7Q9P0M2 348 aaPredicted RBP11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 CLTCL1P53675 1640 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 F8W810 466 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 GGPS1O95749 300 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 CCNE1P24864 410 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 SCNN1BP51168 640 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 ACTR2P61160 394 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 MAGOHP61326 146 aaKnown RBP11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 DDX39BQ13838 428 aaKnown RBP11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 USP10Q14694 798 aaKnown RBP11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 MAPRE2Q15555 327 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 CAPRIN2Q6IMN6 1127 aaKnown RBP11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 MMGT1Q8N4V1 131 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 WNT8AQ9H1J5 351 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 CAND2O75155 1236 aa11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 MYL4P12829 197 aa11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 KLRC2P26717 231 aa11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 CAV1Q03135 178 aa11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 KDSRQ06136 332 aa11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 NOTUMQ6P988 496 aa11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 GSPT2Q8IYD1 628 aaKnown RBP11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 TTC39CQ8N584 583 aa11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 RABGGTAQ92696 567 aa11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 VPS50Q96JG6 964 aa11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 FHDC1Q9C0D6 1143 aaPredicted RBP11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 RRAGCQ9HB90 399 aa11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 PRR12Q9ULL5 1215 aa11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 PLA2G4CQ9UP65 541 aa11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 PCDHA10Q9Y5I2 948 aa11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 H7C1W4 665 aa11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 CYP19A1P11511 503 aaPredicted RBP11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 RBP5P82980 135 aa11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 LRRC14Q15048 493 aa11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 LRRC36Q1X8D7 754 aa11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.72□□□□□ -0.531e-9■■■□□ 15.2
PRPF40A-202ENST00000410080 CEP72Q9P209 647 aa11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 PTCH1Q13635 1447 aa11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 CETPP11597 493 aa11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 PMS2P54278 862 aa11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 CDC42EP1Q00587 391 aa11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 GOLPH3LQ9H4A5 285 aa11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 LY9Q9HBG7 655 aa11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 STAG3L1P0CL83 205 aa11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 FGFR4P22455 802 aa11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 ETF1P62495 437 aaKnown RBP11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 ZBED6P86452 979 aa11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 POU4F1Q01851 419 aa11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 RHOT1Q8IXI2 618 aa11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 TMC2Q8TDI7 906 aa11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 THTPAQ9BU02 230 aa11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 PKD2L2Q9NZM6 624 aa11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 ALDH9A1P49189 494 aa11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 BLOC1S5Q8TDH9 187 aa11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 KAT2BQ92831 832 aa11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 FAR2Q96K12 515 aa11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 CDYLQ9Y232 598 aa11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 CCDC81Q6ZN84 652 aa11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 ASCC2Q9H1I8 757 aaPredicted RBP11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 ZNF304Q9HCX3 659 aa11.72□□□□□ -0.53
PRPF40A-202ENST00000410080 RHOBTB1O94844 696 aa11.71□□□□□ -0.53
PRPF40A-202ENST00000410080 LAMB3Q13751 1172 aa11.71□□□□□ -0.53
PRPF40A-202ENST00000410080 UGT3A1Q6NUS8 523 aa11.71□□□□□ -0.53
PRPF40A-202ENST00000410080 HIBCHQ6NVY1 386 aaPredicted RBP11.71□□□□□ -0.53
PRPF40A-202ENST00000410080 STAG2Q8N3U4 1231 aa11.71□□□□□ -0.53
PRPF40A-202ENST00000410080 RAB6BQ9NRW1 208 aa11.71□□□□□ -0.53
PRPF40A-202ENST00000410080 RNF112Q9ULX5 631 aa11.71□□□□□ -0.53
PRPF40A-202ENST00000410080 OVOS2A0A0G2JMS6 1433 aa11.71□□□□□ -0.53
PRPF40A-202ENST00000410080 OVOS2A0A0J9YW53 1432 aa11.71□□□□□ -0.53
PRPF40A-202ENST00000410080 OVOS2Q6IE36 1432 aa11.71□□□□□ -0.53
PRPF40A-202ENST00000410080 ERN1O75460 977 aaKnown RBP11.71□□□□□ -0.53
PRPF40A-202ENST00000410080 FAM107AO95990 144 aa11.71□□□□□ -0.53
PRPF40A-202ENST00000410080 NUP62P37198 522 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms