RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 RUFY1Q96T51 708 aa21.97■■□□□ 1.11
USP39-203ENST00000409470 TRIM31Q9BZY9 425 aa21.97■■□□□ 1.11
USP39-203ENST00000409470 CYP3A43Q9HB55 503 aa21.97■■□□□ 1.11
USP39-203ENST00000409470 RASAL2Q9UJF2 1139 aa21.97■■□□□ 1.11
USP39-203ENST00000409470 GJD2Q9UKL4 321 aa21.97■■□□□ 1.11
USP39-203ENST00000409470 ECHS1P30084 290 aa21.97■■□□□ 1.11
USP39-203ENST00000409470 CDH5P33151 784 aaPredicted RBP21.97■■□□□ 1.11
USP39-203ENST00000409470 ORC1Q13415 861 aa21.97■■□□□ 1.11
USP39-203ENST00000409470 DENND1BQ6P3S1 775 aa21.97■■□□□ 1.11
USP39-203ENST00000409470 NOTUMQ6P988 496 aa21.97■■□□□ 1.11
USP39-203ENST00000409470 ZDHHC14Q8IZN3 488 aa21.97■■□□□ 1.11
USP39-203ENST00000409470 WDTC1Q8N5D0 677 aa21.97■■□□□ 1.11
USP39-203ENST00000409470 SNTG2Q9NY99 539 aa21.97■■□□□ 1.11
USP39-203ENST00000409470 IP6K2Q9UHH9 426 aa21.97■■□□□ 1.11
USP39-203ENST00000409470 CITO14578 2027 aa21.96■■□□□ 1.11
USP39-203ENST00000409470 RNF40O75150 1001 aa21.96■■□□□ 1.11
USP39-203ENST00000409470 DARSP14868 501 aaKnown RBP21.96■■□□□ 1.11
USP39-203ENST00000409470 CRHR2Q13324 411 aa21.96■■□□□ 1.11
USP39-203ENST00000409470 HIC1Q14526 733 aa21.96■■□□□ 1.11
USP39-203ENST00000409470 LLGL1Q15334 1064 aa21.96■■□□□ 1.11
USP39-203ENST00000409470 RHOT1Q8IXI2 618 aa21.96■■□□□ 1.11
USP39-203ENST00000409470 MREGQ8N565 214 aa21.96■■□□□ 1.11
USP39-203ENST00000409470 SEC14L1Q92503 715 aa21.96■■□□□ 1.11
USP39-203ENST00000409470 Q9Y3F1 56 aa21.96■■□□□ 1.11
USP39-203ENST00000409470 HAS3O00219 553 aa21.96■■□□□ 1.11
USP39-203ENST00000409470 PSTPIP1O43586 416 aa21.96■■□□□ 1.11
USP39-203ENST00000409470 RARAP10276 462 aa21.96■■□□□ 1.11
USP39-203ENST00000409470 YARSP54577 528 aaKnown RBP21.96■■□□□ 1.11
USP39-203ENST00000409470 RPL7AP62424 266 aaKnown RBP21.96■■□□□ 1.11
USP39-203ENST00000409470 PCBP1Q15365 356 aaKnown RBP eCLIP21.96■■□□□ 1.11
USP39-203ENST00000409470 DCUN1D2Q6PH85 259 aa21.96■■□□□ 1.11
USP39-203ENST00000409470 CCDC137Q6PK04 289 aaKnown RBP21.96■■□□□ 1.11
USP39-203ENST00000409470 JAMLQ86YT9 394 aa21.96■■□□□ 1.11
USP39-203ENST00000409470 GOLGA6L1Q8N7Z2 621 aa21.96■■□□□ 1.11
USP39-203ENST00000409470 ERP44Q9BS26 406 aa21.96■■□□□ 1.11
USP39-203ENST00000409470 KATNAL1Q9BW62 490 aa21.96■■□□□ 1.11
USP39-203ENST00000409470 EIF2AQ9BY44 585 aaKnown RBP21.96■■□□□ 1.11
USP39-203ENST00000409470 TRIM6Q9C030 488 aaPredicted RBP21.96■■□□□ 1.11
USP39-203ENST00000409470 PLEKHA5Q9HAU0 1116 aa21.96■■□□□ 1.11
USP39-203ENST00000409470 TREHO43280 583 aa21.95■■□□□ 1.1
USP39-203ENST00000409470 CILPO75339 1184 aa21.95■■□□□ 1.1
USP39-203ENST00000409470 SREBF2Q12772 1141 aa21.95■■□□□ 1.1
USP39-203ENST00000409470 CFAP58Q5T655 872 aa21.95■■□□□ 1.1
USP39-203ENST00000409470 SLC4A11Q8NBS3 891 aa21.95■■□□□ 1.1
USP39-203ENST00000409470 DDX27Q96GQ7 796 aaKnown RBP21.95■■□□□ 1.1
USP39-203ENST00000409470 TMEM176AQ96HP8 235 aa21.95■■□□□ 1.1
USP39-203ENST00000409470 MCEEQ96PE7 176 aa21.95■■□□□ 1.1
USP39-203ENST00000409470 TWNKQ96RR1 684 aa21.95■■□□□ 1.1
USP39-203ENST00000409470 NEUROG2Q9H2A3 272 aa21.95■■□□□ 1.1
USP39-203ENST00000409470 LHX5Q9H2C1 402 aa21.95■■□□□ 1.1
USP39-203ENST00000409470 HMGXB4Q9UGU5 601 aa21.95■■□□□ 1.1
USP39-203ENST00000409470 PCYOX1Q9UHG3 505 aa21.95■■□□□ 1.1
USP39-203ENST00000409470 TMEM191CA6NGB0 347 aa21.94■■□□□ 1.1
USP39-203ENST00000409470 FSCN2O14926 492 aa21.94■■□□□ 1.1
USP39-203ENST00000409470 MAN1A1P33908 653 aa21.94■■□□□ 1.1
USP39-203ENST00000409470 TAS2R40P59535 323 aa21.94■■□□□ 1.1
USP39-203ENST00000409470 ZNF200P98182 395 aaPredicted RBP21.94■■□□□ 1.1
USP39-203ENST00000409470 PTPN11Q06124 597 aaPredicted RBP21.94■■□□□ 1.1
USP39-203ENST00000409470 FSCN1Q16658 493 aaKnown RBP21.94■■□□□ 1.1
USP39-203ENST00000409470 CYP1B1Q16678 543 aa21.94■■□□□ 1.1
USP39-203ENST00000409470 CYP4A22Q5TCH4 519 aa21.94■■□□□ 1.1
USP39-203ENST00000409470 TTC27Q6P3X3 843 aa21.94■■□□□ 1.1
USP39-203ENST00000409470 CCDC50Q8IVM0 306 aa21.94■■□□□ 1.1
USP39-203ENST00000409470 CCDC105Q8IYK2 499 aa21.94■■□□□ 1.1
USP39-203ENST00000409470 RUNDC3BQ96NL0 473 aa21.94■■□□□ 1.1
USP39-203ENST00000409470 ELOVL4Q9GZR5 314 aa21.94■■□□□ 1.1
USP39-203ENST00000409470 STRIP2Q9ULQ0 834 aa21.94■■□□□ 1.1
USP39-203ENST00000409470 C17orf102A2RUQ5 167 aa21.94■■□□□ 1.1
USP39-203ENST00000409470 OPA1O60313 960 aa21.94■■□□□ 1.1
USP39-203ENST00000409470 GJC1P36383 396 aa21.94■■□□□ 1.1
USP39-203ENST00000409470 COILP38432 576 aaPredicted RBP21.94■■□□□ 1.1
USP39-203ENST00000409470 PTGIRP43119 386 aa21.94■■□□□ 1.1
USP39-203ENST00000409470 ADAM17P78536 824 aa21.94■■□□□ 1.1
USP39-203ENST00000409470 TAP1Q03518 808 aa21.94■■□□□ 1.1
USP39-203ENST00000409470 MYO1EQ12965 1108 aa21.94■■□□□ 1.1
USP39-203ENST00000409470 SIX1Q15475 284 aaPredicted RBP21.94■■□□□ 1.1
USP39-203ENST00000409470 DUPD1Q68J44 220 aa21.94■■□□□ 1.1
USP39-203ENST00000409470 MAIP1Q8WWC4 291 aa21.94■■□□□ 1.1
USP39-203ENST00000409470 ADAM21Q9UKJ8 722 aa21.94■■□□□ 1.1
USP39-203ENST00000409470 HSPA9P38646 679 aaKnown RBP21.93■■□□□ 1.1
USP39-203ENST00000409470 LRRC45Q96CN5 670 aa21.93■■□□□ 1.1
USP39-203ENST00000409470 SNX27Q96L92 541 aa21.93■■□□□ 1.1
USP39-203ENST00000409470 HEXIM2Q96MH2 286 aaKnown RBP21.93■■□□□ 1.1
USP39-203ENST00000409470 ZIM3Q96PE6 472 aa21.93■■□□□ 1.1
USP39-203ENST00000409470 LCMT1Q9UIC8 334 aa21.93■■□□□ 1.1
USP39-203ENST00000409470 DERAQ9Y315 318 aa21.93■■□□□ 1.1
USP39-203ENST00000409470 HES2Q9Y543 173 aa21.93■■□□□ 1.1
USP39-203ENST00000409470 TCRBV5S1A1TA0A578 114 aa21.92■■□□□ 1.1
USP39-203ENST00000409470 O00370 1275 aa21.92■■□□□ 1.1
USP39-203ENST00000409470 STAU1O95793 577 aaKnown RBP21.92■■□□□ 1.1
USP39-203ENST00000409470 AKR1A1P14550 325 aa21.92■■□□□ 1.1
USP39-203ENST00000409470 SGO2Q562F6 1265 aa21.92■■□□□ 1.1
USP39-203ENST00000409470 C7orf31Q8N865 590 aa21.92■■□□□ 1.1
USP39-203ENST00000409470 C3orf20Q8ND61 904 aa21.92■■□□□ 1.1
USP39-203ENST00000409470 SYNCQ9H7C4 482 aa21.92■■□□□ 1.1
USP39-203ENST00000409470 BARX2Q9UMQ3 279 aaPredicted RBP21.92■■□□□ 1.1
USP39-203ENST00000409470 PIN4Q9Y237 131 aaKnown RBP21.92■■□□□ 1.1
USP39-203ENST00000409470 PODXLO00592 558 aa21.92■■□□□ 1.1
USP39-203ENST00000409470 GNAT1P11488 350 aa21.92■■□□□ 1.1
USP39-203ENST00000409470 AXLP30530 894 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms