RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 CACNA2D4Q7Z3S7 1137 aa8.44□□□□□ -1.06
LSM5-202ENST00000409292 SKAP1Q86WV1 359 aa8.44□□□□□ -1.06
LSM5-202ENST00000409292 TCEAL4Q96EI5 215 aa8.44□□□□□ -1.06
LSM5-202ENST00000409292 SUSD3Q96L08 255 aa8.44□□□□□ -1.06
LSM5-202ENST00000409292 TIPINQ9BVW5 301 aa8.44□□□□□ -1.06
LSM5-202ENST00000409292 CDT1Q9H211 546 aa8.44□□□□□ -1.06
LSM5-202ENST00000409292 PARD6AQ9NPB6 346 aa8.44□□□□□ -1.06
LSM5-202ENST00000409292 EVA1BQ9NVM1 165 aa8.44□□□□□ -1.06
LSM5-202ENST00000409292 SLC8A2Q9UPR5 921 aa8.44□□□□□ -1.06
LSM5-202ENST00000409292 KIAA1024Q9UPX6 916 aa8.44□□□□□ -1.06
LSM5-202ENST00000409292 DOCK6Q96HP0 2047 aa8.44□□□□□ -1.06
LSM5-202ENST00000409292 EPG5Q9HCE0 2579 aa8.43□□□□□ -1.06
LSM5-202ENST00000409292 SLC38A8A6NNN8 435 aa8.43□□□□□ -1.06
LSM5-202ENST00000409292 CLDN3O15551 220 aa8.43□□□□□ -1.06
LSM5-202ENST00000409292 SEC24AO95486 1093 aa8.43□□□□□ -1.06
LSM5-202ENST00000409292 FCARP24071 287 aa8.43□□□□□ -1.06
LSM5-202ENST00000409292 HOXA6P31267 233 aa8.43□□□□□ -1.06
LSM5-202ENST00000409292 TRAPPC10P48553 1259 aa8.43□□□□□ -1.06
LSM5-202ENST00000409292 TUFMP49411 452 aaKnown RBP8.43□□□□□ -1.06
LSM5-202ENST00000409292 LIMK1P53667 647 aa8.43□□□□□ -1.06
LSM5-202ENST00000409292 EPHA5P54756 1037 aa8.43□□□□□ -1.06
LSM5-202ENST00000409292 SATB1Q01826 763 aa8.43□□□□□ -1.06
LSM5-202ENST00000409292 GRSF1Q12849 480 aaKnown RBP eCLIP8.43□□□□□ -1.06
LSM5-202ENST00000409292 FZD5Q13467 585 aa8.43□□□□□ -1.06
LSM5-202ENST00000409292 TEAD2Q15562 447 aa8.43□□□□□ -1.06
LSM5-202ENST00000409292 XKR4Q5GH76 650 aa8.43□□□□□ -1.06
LSM5-202ENST00000409292 NT5DC1Q5TFE4 455 aa8.43□□□□□ -1.06
LSM5-202ENST00000409292 FAM184AQ8NB25 1140 aa8.43□□□□□ -1.06
LSM5-202ENST00000409292 EHBP1Q8NDI1 1231 aa8.43□□□□□ -1.06
LSM5-202ENST00000409292 CCDC26Q8TAB7 109 aa8.43□□□□□ -1.06
LSM5-202ENST00000409292 SNX29Q8TEQ0 813 aa8.43□□□□□ -1.06
LSM5-202ENST00000409292 BSNDQ8WZ55 320 aa8.43□□□□□ -1.06
LSM5-202ENST00000409292 TNFRSF25Q93038 417 aa8.43□□□□□ -1.06
LSM5-202ENST00000409292 GTF3C6Q969F1 213 aa8.43□□□□□ -1.06
LSM5-202ENST00000409292 BICD1Q96G01 975 aa8.43□□□□□ -1.06
LSM5-202ENST00000409292 C8orf76Q96K31 380 aa8.43□□□□□ -1.06
LSM5-202ENST00000409292 TBC1D32Q96NH3 1257 aa8.43□□□□□ -1.06
LSM5-202ENST00000409292 TSPAN18Q96SJ8 248 aa8.43□□□□□ -1.06
LSM5-202ENST00000409292 ACO2Q99798 780 aaKnown RBP8.43□□□□□ -1.06
LSM5-202ENST00000409292 KIFC3Q9BVG8 833 aa8.43□□□□□ -1.06
LSM5-202ENST00000409292 ATXN3LQ9H3M9 355 aa8.43□□□□□ -1.06
LSM5-202ENST00000409292 PLEKHA5Q9HAU0 1116 aa8.43□□□□□ -1.06
LSM5-202ENST00000409292 OBP2AQ9NY56 170 aa8.43□□□□□ -1.06
LSM5-202ENST00000409292 CNTN3Q9P232 1028 aa8.43□□□□□ -1.06
LSM5-202ENST00000409292 ANKFY1Q9P2R3 1169 aa8.43□□□□□ -1.06
LSM5-202ENST00000409292 UBQLN1Q9UMX0 589 aaKnown RBP8.43□□□□□ -1.06
LSM5-202ENST00000409292 YIPF1Q9Y548 306 aa8.43□□□□□ -1.06
LSM5-202ENST00000409292 PCDHGA5Q9Y5G8 931 aa8.43□□□□□ -1.06
LSM5-202ENST00000409292 CCDC163A0A0D9SF12 145 aa8.42□□□□□ -1.06
LSM5-202ENST00000409292 A0A1W2PRU2 124 aa8.42□□□□□ -1.06
LSM5-202ENST00000409292 MYBPHLA2RUH7 354 aa8.42□□□□□ -1.06
LSM5-202ENST00000409292 SPECC1L-ADORA2AF8WAN1 911 aa8.42□□□□□ -1.06
LSM5-202ENST00000409292 J3QL48 77 aa8.42□□□□□ -1.06
LSM5-202ENST00000409292 TOM1L1O75674 476 aa8.42□□□□□ -1.06
LSM5-202ENST00000409292 RPP40O75818 363 aaKnown RBP8.42□□□□□ -1.06
LSM5-202ENST00000409292 AKAP3O75969 853 aa8.42□□□□□ -1.06
LSM5-202ENST00000409292 CLTAP09496 248 aa8.42□□□□□ -1.06
LSM5-202ENST00000409292 ODC1P11926 461 aa8.42□□□□□ -1.06
LSM5-202ENST00000409292 GJA1P17302 382 aa8.42□□□□□ -1.06
LSM5-202ENST00000409292 SCP2P22307 547 aa8.42□□□□□ -1.06
LSM5-202ENST00000409292 TGM1P22735 817 aa8.42□□□□□ -1.06
LSM5-202ENST00000409292 CDC25CP30307 473 aa8.42□□□□□ -1.06
LSM5-202ENST00000409292 CTHP32929 405 aa8.42□□□□□ -1.06
LSM5-202ENST00000409292 ABCD1P33897 745 aa8.42□□□□□ -1.06
LSM5-202ENST00000409292 NPTX2P47972 431 aa8.42□□□□□ -1.06
LSM5-202ENST00000409292 PPP2R3AQ06190 1150 aa8.42□□□□□ -1.06
LSM5-202ENST00000409292 FCHO2Q0JRZ9 810 aa8.42□□□□□ -1.06
LSM5-202ENST00000409292 KCNH2Q12809 1159 aa8.42□□□□□ -1.06
LSM5-202ENST00000409292 MRPL58Q14197 206 aaKnown RBP8.42□□□□□ -1.06
LSM5-202ENST00000409292 PDIA5Q14554 519 aa8.42□□□□□ -1.06
LSM5-202ENST00000409292 NOLC1Q14978 699 aaKnown RBP eCLIP8.42□□□□□ -1.06
LSM5-202ENST00000409292 KARSQ15046 597 aaKnown RBP8.42□□□□□ -1.06
LSM5-202ENST00000409292 ZNF174Q15697 407 aa8.42□□□□□ -1.06
LSM5-202ENST00000409292 ELF2Q15723 593 aa8.42□□□□□ -1.06
LSM5-202ENST00000409292 ITPRIPL2Q3MIP1 535 aa8.42□□□□□ -1.06
LSM5-202ENST00000409292 TTC38Q5R3I4 469 aa8.42□□□□□ -1.06
LSM5-202ENST00000409292 GPR158Q5T848 1215 aa8.42□□□□□ -1.06
LSM5-202ENST00000409292 CC2D1AQ6P1N0 951 aaPredicted RBP8.42□□□□□ -1.06
LSM5-202ENST00000409292 ZPBP2Q6X784 338 aa8.42□□□□□ -1.06
LSM5-202ENST00000409292 C11orf74Q86VG3 221 aa8.42□□□□□ -1.06
LSM5-202ENST00000409292 WDR5BQ86VZ2 330 aa8.42□□□□□ -1.06
LSM5-202ENST00000409292 METTL23Q86XA0 190 aa8.42□□□□□ -1.06
LSM5-202ENST00000409292 ARID3BQ8IVW6 561 aaPredicted RBP8.42□□□□□ -1.06
LSM5-202ENST00000409292 THEM5Q8N1Q8 247 aa8.42□□□□□ -1.06
LSM5-202ENST00000409292 KCTD17Q8N5Z5 321 aa8.42□□□□□ -1.06
LSM5-202ENST00000409292 NECAB1Q8N987 351 aa8.42□□□□□ -1.06
LSM5-202ENST00000409292 C3orf58Q8NDZ4 430 aa8.42□□□□□ -1.06
LSM5-202ENST00000409292 BPIFB1Q8TDL5 484 aa8.42□□□□□ -1.06
LSM5-202ENST00000409292 CDK5RAP3Q96JB5 506 aa8.42□□□□□ -1.06
LSM5-202ENST00000409292 TARS2Q9BW92 718 aaKnown RBP8.42□□□□□ -1.06
LSM5-202ENST00000409292 TMEM60Q9H2L4 133 aa8.42□□□□□ -1.06
LSM5-202ENST00000409292 FOXP1Q9H334 677 aaPredicted RBP8.42□□□□□ -1.06
LSM5-202ENST00000409292 DDX19AQ9NUU7 478 aaKnown RBP8.42□□□□□ -1.06
LSM5-202ENST00000409292 CEP72Q9P209 647 aa8.42□□□□□ -1.06
LSM5-202ENST00000409292 DSEQ9UL01 958 aa8.42□□□□□ -1.06
LSM5-202ENST00000409292 USP20Q9Y2K6 914 aa8.42□□□□□ -1.06
LSM5-202ENST00000409292 MYO15AQ9UKN7 3530 aa8.42□□□□□ -1.06
LSM5-202ENST00000409292 RALGAPA1Q6GYQ0 2036 aa8.41□□□□□ -1.06
LSM5-202ENST00000409292 VWA8A3KMH1 1905 aa8.41□□□□□ -1.06
LSM5-202ENST00000409292 LAD1O00515 517 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms