RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 UCMAQ8WVF2 138 aa8.77□□□□□ -1
SNX13-201ENST00000409076 SEC14L1Q92503 715 aa8.77□□□□□ -1
SNX13-201ENST00000409076 FAF2Q96CS3 445 aa8.77□□□□□ -1
SNX13-201ENST00000409076 MASTLQ96GX5 879 aa8.77□□□□□ -1
SNX13-201ENST00000409076 RAB6CQ9H0N0 254 aa8.77□□□□□ -1
SNX13-201ENST00000409076 KDM4CQ9H3R0 1056 aa8.77□□□□□ -1
SNX13-201ENST00000409076 FAM237BA0A1B0GVD1 139 aa8.77□□□□□ -1.01
SNX13-201ENST00000409076 TCRBV7S3A2A0A539 114 aa8.77□□□□□ -1.01
SNX13-201ENST00000409076 CAPN9O14815 690 aa8.77□□□□□ -1.01
SNX13-201ENST00000409076 TRPA1O75762 1119 aa8.77□□□□□ -1.01
SNX13-201ENST00000409076 PDE5AO76074 875 aa8.77□□□□□ -1.01
SNX13-201ENST00000409076 CCNE2O96020 404 aa8.77□□□□□ -1.01
SNX13-201ENST00000409076 PYGBP11216 843 aa8.77□□□□□ -1.01
SNX13-201ENST00000409076 ARFIP2P53365 341 aa8.77□□□□□ -1.01
SNX13-201ENST00000409076 SESN2P58004 480 aaPredicted RBP8.77□□□□□ -1.01
SNX13-201ENST00000409076 MGAT5Q09328 741 aa8.77□□□□□ -1.01
SNX13-201ENST00000409076 HIF1AQ16665 826 aa8.77□□□□□ -1.01
SNX13-201ENST00000409076 CFAP57Q96MR6 1250 aa8.77□□□□□ -1.01
SNX13-201ENST00000409076 RPS6KC1Q96S38 1066 aa8.77□□□□□ -1.01
SNX13-201ENST00000409076 TBC1D10AQ9BXI6 508 aa8.77□□□□□ -1.01
SNX13-201ENST00000409076 KIAA1586Q9HCI6 787 aa8.77□□□□□ -1.01
SNX13-201ENST00000409076 AAASQ9NRG9 546 aa8.77□□□□□ -1.01
SNX13-201ENST00000409076 SLC9A2Q9UBY0 812 aa8.77□□□□□ -1.01
SNX13-201ENST00000409076 ZNF70Q9UC06 446 aaPredicted RBP8.77□□□□□ -1.01
SNX13-201ENST00000409076 PCDHA3Q9Y5H8 950 aa8.77□□□□□ -1.01
SNX13-201ENST00000409076 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.77□□□□□ -1.01
SNX13-201ENST00000409076 DOT1LQ8TEK3 1739 aa8.77□□□□□ -1.01
SNX13-201ENST00000409076 KDM4FA0A1W2PPD8 638 aa8.77□□□□□ -1.01
SNX13-201ENST00000409076 GSCP56915 257 aaPredicted RBP8.77□□□□□ -1.01
SNX13-201ENST00000409076 TSNAXIP1Q2TAA8 658 aa8.77□□□□□ -1.01
SNX13-201ENST00000409076 RNF220Q5VTB9 566 aa8.77□□□□□ -1.01
SNX13-201ENST00000409076 RGS9BPQ6ZS82 235 aa8.77□□□□□ -1.01
SNX13-201ENST00000409076 CENPUQ71F23 418 aa8.77□□□□□ -1.01
SNX13-201ENST00000409076 SLFN11Q7Z7L1 901 aa8.77□□□□□ -1.01
SNX13-201ENST00000409076 PIDD1Q9HB75 910 aa8.77□□□□□ -1.01
SNX13-201ENST00000409076 RAB6BQ9NRW1 208 aa8.77□□□□□ -1.01
SNX13-201ENST00000409076 XPO7Q9UIA9 1087 aaKnown RBP8.77□□□□□ -1.01
SNX13-201ENST00000409076 ADGRA3Q8IWK6 1321 aa8.77□□□□□ -1.01
SNX13-201ENST00000409076 TTLL13PA6NNM8 815 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 PEX5P50542 639 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 CDH6P55285 790 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 MRPS9P82933 396 aaKnown RBP8.76□□□□□ -1.01
SNX13-201ENST00000409076 NCOA4Q13772 614 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 SH3PXD2AQ5TCZ1 1133 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 USP37Q86T82 979 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 ZBTB46Q86UZ6 589 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 HEXIM2Q96MH2 286 aaKnown RBP8.76□□□□□ -1.01
SNX13-201ENST00000409076 FRMPD4Q14CM0 1322 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 IGKV6D-41A0A0C4DH26 115 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 B2RBV5 119 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 GOLGA8TH3BQL2 631 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 EIF3DO15371 548 aaKnown RBP eCLIP8.76□□□□□ -1.01
SNX13-201ENST00000409076 CST3P01034 146 aaPredicted RBP8.76□□□□□ -1.01
SNX13-201ENST00000409076 CHRM1P11229 460 aaPredicted RBP8.76□□□□□ -1.01
SNX13-201ENST00000409076 ITIH2P19823 946 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 TAC1P20366 129 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 RABGGTBP53611 331 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 POU5F1Q01860 360 aaKnown RBP8.76□□□□□ -1.01
SNX13-201ENST00000409076 CNTN2Q02246 1040 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 CLEC16AQ2KHT3 1053 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 C15orf59Q2T9L4 293 aaPredicted RBP8.76□□□□□ -1.01
SNX13-201ENST00000409076 GJC2Q5T442 439 aaPredicted RBP8.76□□□□□ -1.01
SNX13-201ENST00000409076 FAM102AQ5T9C2 384 aaPredicted RBP8.76□□□□□ -1.01
SNX13-201ENST00000409076 NXNQ6DKJ4 435 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 DSTYKQ6XUX3 929 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 ANO5Q75V66 913 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 ARMC9Q7Z3E5 817 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 PODNQ7Z5L7 613 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 CCDC60Q8IWA6 550 aaPredicted RBP8.76□□□□□ -1.01
SNX13-201ENST00000409076 PPFIBP2Q8ND30 876 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 PIP4K2CQ8TBX8 421 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 ART4Q93070 314 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 FAM149B1Q96BN6 582 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 PGBD4Q96DM1 585 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 PGM2Q96G03 612 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 RAB3IPQ96QF0 476 aaPredicted RBP8.76□□□□□ -1.01
SNX13-201ENST00000409076 MMP19Q99542 508 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 SENP7Q9BQF6 1050 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 TXLNGQ9NUQ3 528 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 NUB1Q9Y5A7 615 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 MROH7Q68CQ1 1323 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 ROBO3Q96MS0 1386 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 NOP56O00567 594 aaKnown RBP8.76□□□□□ -1.01
SNX13-201ENST00000409076 NR3C2P08235 984 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 MYL2P10916 166 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 PPP2R5EQ16537 467 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 DACT2Q5SW24 774 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 RNF149Q8NC42 400 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 CCNYQ8ND76 341 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 GJD4Q96KN9 370 aaPredicted RBP8.76□□□□□ -1.01
SNX13-201ENST00000409076 PAFAH2Q99487 392 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 ASCC2Q9H1I8 757 aaPredicted RBP8.76□□□□□ -1.01
SNX13-201ENST00000409076 CHKBQ9Y259 395 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 WASF2Q9Y6W5 498 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 PTPRJQ12913 1337 aa8.76□□□□□ -1.01
SNX13-201ENST00000409076 PRRC2BQ5JSZ5 2229 aaKnown RBP8.76□□□□□ -1.01
SNX13-201ENST00000409076 NCANO14594 1321 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 A0A0A6YYK5 440 aaPredicted RBP8.75□□□□□ -1.01
SNX13-201ENST00000409076 M0QYV0 167 aa8.75□□□□□ -1.01
SNX13-201ENST00000409076 UGT1A9O60656 530 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms