RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 TMEM35BQ8NCS4 154 aa10.44□□□□□ -0.74
POLR1A-202ENST00000409024 TPCN2Q8NHX9 752 aa10.44□□□□□ -0.74
POLR1A-202ENST00000409024 SPATA18Q8TC71 538 aa10.44□□□□□ -0.74
POLR1A-202ENST00000409024 PPP1R13LQ8WUF5 828 aa10.44□□□□□ -0.74
POLR1A-202ENST00000409024 ZNF606Q8WXB4 792 aa10.44□□□□□ -0.74
POLR1A-202ENST00000409024 WNT8BQ93098 351 aa10.44□□□□□ -0.74
POLR1A-202ENST00000409024 TMEM176AQ96HP8 235 aa10.44□□□□□ -0.74
POLR1A-202ENST00000409024 ZMAT2Q96NC0 199 aaKnown RBP10.44□□□□□ -0.74
POLR1A-202ENST00000409024 PCDHB18PQ96TA0 734 aa10.44□□□□□ -0.74
POLR1A-202ENST00000409024 ARID3AQ99856 593 aa10.44□□□□□ -0.74
POLR1A-202ENST00000409024 PACSIN1Q9BY11 444 aa10.44□□□□□ -0.74
POLR1A-202ENST00000409024 PDCL3Q9H2J4 239 aa10.44□□□□□ -0.74
POLR1A-202ENST00000409024 NXF1Q9UBU9 619 aaKnown RBP10.44□□□□□ -0.74
POLR1A-202ENST00000409024 PADI3Q9ULW8 664 aa10.44□□□□□ -0.74
POLR1A-202ENST00000409024 BARX2Q9UMQ3 279 aaPredicted RBP10.44□□□□□ -0.74
POLR1A-202ENST00000409024 SNX12Q9UMY4 172 aa10.44□□□□□ -0.74
POLR1A-202ENST00000409024 HYOU1Q9Y4L1 999 aa10.44□□□□□ -0.74
POLR1A-202ENST00000409024 CITO14578 2027 aa10.43□□□□□ -0.74
POLR1A-202ENST00000409024 UMODL1Q5DID0 1318 aa10.43□□□□□ -0.74
POLR1A-202ENST00000409024 FRMPD3Q5JV73 1810 aa10.43□□□□□ -0.74
POLR1A-202ENST00000409024 EFCAB8A8MWE9 144 aa10.43□□□□□ -0.74
POLR1A-202ENST00000409024 PITPNM1O00562 1244 aa10.43□□□□□ -0.74
POLR1A-202ENST00000409024 DYNC1I1O14576 645 aa10.43□□□□□ -0.74
POLR1A-202ENST00000409024 FANCGO15287 622 aa10.43□□□□□ -0.74
POLR1A-202ENST00000409024 THAP12O43422 761 aa10.43□□□□□ -0.74
POLR1A-202ENST00000409024 PALMO75781 387 aa10.43□□□□□ -0.74
POLR1A-202ENST00000409024 CLSTN1O94985 981 aa10.43□□□□□ -0.74
POLR1A-202ENST00000409024 VDRP11473 427 aa10.43□□□□□ -0.74
POLR1A-202ENST00000409024 NSFP46459 744 aaKnown RBP10.43□□□□□ -0.74
POLR1A-202ENST00000409024 TAF6P49848 677 aa10.43□□□□□ -0.74
POLR1A-202ENST00000409024 TAP1Q03518 808 aa10.43□□□□□ -0.74
POLR1A-202ENST00000409024 ITIH3Q06033 890 aa10.43□□□□□ -0.74
POLR1A-202ENST00000409024 CNGA2Q16280 664 aa10.43□□□□□ -0.74
POLR1A-202ENST00000409024 ZNF618Q5T7W0 954 aa10.43□□□□□ -0.74
POLR1A-202ENST00000409024 MEI1Q5TIA1 1274 aa10.43□□□□□ -0.74
POLR1A-202ENST00000409024 C1orf53Q5VUE5 145 aa10.43□□□□□ -0.74
POLR1A-202ENST00000409024 TAF3Q5VWG9 929 aa10.43□□□□□ -0.74
POLR1A-202ENST00000409024 C11orf63Q6NUN7 778 aa10.43□□□□□ -0.74
POLR1A-202ENST00000409024 LIMS2Q7Z4I7 341 aa10.43□□□□□ -0.74
POLR1A-202ENST00000409024 LRRC57Q8N9N7 239 aa10.43□□□□□ -0.74
POLR1A-202ENST00000409024 MSANTD4Q8NCY6 345 aa10.43□□□□□ -0.74
POLR1A-202ENST00000409024 SLC35G2Q8TBE7 412 aa10.43□□□□□ -0.74
POLR1A-202ENST00000409024 DDX27Q96GQ7 796 aaKnown RBP10.43□□□□□ -0.74
POLR1A-202ENST00000409024 PPP1R10Q96QC0 940 aaKnown RBP10.43□□□□□ -0.74
POLR1A-202ENST00000409024 RPS6KC1Q96S38 1066 aa10.43□□□□□ -0.74
POLR1A-202ENST00000409024 MIS12Q9H081 205 aa10.43□□□□□ -0.74
POLR1A-202ENST00000409024 AGO3Q9H9G7 860 aaKnown RBP10.43□□□□□ -0.74
POLR1A-202ENST00000409024 MRPL47Q9HD33 250 aaKnown RBP10.43□□□□□ -0.74
POLR1A-202ENST00000409024 ABCB6Q9NP58 842 aa10.43□□□□□ -0.74
POLR1A-202ENST00000409024 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.43□□□□□ -0.74
POLR1A-202ENST00000409024 RGS18Q9NS28 235 aa10.43□□□□□ -0.74
POLR1A-202ENST00000409024 TRMT13Q9NUP7 481 aaKnown RBP10.43□□□□□ -0.74
POLR1A-202ENST00000409024 SALL4Q9UJQ4 1053 aa10.43□□□□□ -0.74
POLR1A-202ENST00000409024 TFR2Q9UP52 801 aa10.43□□□□□ -0.74
POLR1A-202ENST00000409024 CAPN6Q9Y6Q1 641 aa10.43□□□□□ -0.74
POLR1A-202ENST00000409024 ARHGEF37A1IGU5 675 aa10.42□□□□□ -0.74
POLR1A-202ENST00000409024 GRID2IPA4D2P6 1211 aa10.42□□□□□ -0.74
POLR1A-202ENST00000409024 MIF4GDA9UHW6 222 aaKnown RBP10.42□□□□□ -0.74
POLR1A-202ENST00000409024 BUB1O43683 1085 aa10.42□□□□□ -0.74
POLR1A-202ENST00000409024 CALB1P05937 261 aa10.42□□□□□ -0.74
POLR1A-202ENST00000409024 THP07101 528 aa10.42□□□□□ -0.74
POLR1A-202ENST00000409024 TUBBP07437 444 aa10.42□□□□□ -0.74
POLR1A-202ENST00000409024 CTSHP09668 335 aa10.42□□□□□ -0.74
POLR1A-202ENST00000409024 WEE2P0C1S8 567 aa10.42□□□□□ -0.74
POLR1A-202ENST00000409024 GHRP10912 638 aa10.42□□□□□ -0.74
POLR1A-202ENST00000409024 SELPP16109 830 aa10.42□□□□□ -0.74
POLR1A-202ENST00000409024 AKAP5P24588 427 aa10.42□□□□□ -0.74
POLR1A-202ENST00000409024 CD52P31358 61 aa10.42□□□□□ -0.74
POLR1A-202ENST00000409024 GSCP56915 257 aaPredicted RBP10.42□□□□□ -0.74
POLR1A-202ENST00000409024 SNX16P57768 344 aa10.42□□□□□ -0.74
POLR1A-202ENST00000409024 NOMO3P69849 1222 aa10.42□□□□□ -0.74
POLR1A-202ENST00000409024 FAM189BP81408 668 aa10.42□□□□□ -0.74
POLR1A-202ENST00000409024 LRRC26Q2I0M4 334 aa10.42□□□□□ -0.74
POLR1A-202ENST00000409024 TRAF7Q6Q0C0 670 aa10.42□□□□□ -0.74
POLR1A-202ENST00000409024 ZNF572Q7Z3I7 529 aaPredicted RBP10.42□□□□□ -0.74
POLR1A-202ENST00000409024 GPIHBP1Q8IV16 184 aa10.42□□□□□ -0.74
POLR1A-202ENST00000409024 FAM126BQ8IXS8 530 aa10.42□□□□□ -0.74
POLR1A-202ENST00000409024 MCOLN2Q8IZK6 566 aa10.42□□□□□ -0.74
POLR1A-202ENST00000409024 TOP6BLQ8N6T0 577 aa10.42□□□□□ -0.74
POLR1A-202ENST00000409024 APBB2Q92870 758 aa10.42□□□□□ -0.74
POLR1A-202ENST00000409024 PBKQ96KB5 322 aa10.42□□□□□ -0.74
POLR1A-202ENST00000409024 UROC1Q96N76 676 aa10.42□□□□□ -0.74
POLR1A-202ENST00000409024 TOX2Q96NM4 488 aa10.42□□□□□ -0.74
POLR1A-202ENST00000409024 NT5C1AQ9BXI3 368 aa10.42□□□□□ -0.74
POLR1A-202ENST00000409024 THAP2Q9H0W7 228 aa10.42□□□□□ -0.74
POLR1A-202ENST00000409024 ELAC1Q9H777 363 aaKnown RBP10.42□□□□□ -0.74
POLR1A-202ENST00000409024 TAS2R14Q9NYV8 317 aa10.42□□□□□ -0.74
POLR1A-202ENST00000409024 AMFRQ9UKV5 643 aa10.42□□□□□ -0.74
POLR1A-202ENST00000409024 STRIP2Q9ULQ0 834 aa10.42□□□□□ -0.74
POLR1A-202ENST00000409024 ARIH1Q9Y4X5 557 aaPredicted RBP10.42□□□□□ -0.74
POLR1A-202ENST00000409024 HES2Q9Y543 173 aa10.42□□□□□ -0.74
POLR1A-202ENST00000409024 SCINQ9Y6U3 715 aa10.42□□□□□ -0.74
POLR1A-202ENST00000409024 UQCRHLA0A096LP55 91 aa10.41□□□□□ -0.74
POLR1A-202ENST00000409024 TMCO5BA8MYB1 307 aa10.41□□□□□ -0.74
POLR1A-202ENST00000409024 KPNA7A9QM74 516 aa10.41□□□□□ -0.74
POLR1A-202ENST00000409024 KIF4AO95239 1232 aa10.41□□□□□ -0.74
POLR1A-202ENST00000409024 ATP1A1P05023 1023 aaKnown RBP10.41□□□□□ -0.74
POLR1A-202ENST00000409024 UQCRHP07919 91 aa10.41□□□□□ -0.74
POLR1A-202ENST00000409024 SETSIPP0DME0 302 aa10.41□□□□□ -0.74
POLR1A-202ENST00000409024 CD58P19256 250 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms