RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 TSNAXIP1Q2TAA8 658 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 TAF1BQ53T94 588 aaPredicted RBP4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 RWDD4Q6NW29 188 aaKnown RBP4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 EPM2AIP1Q7L775 607 aaPredicted RBP4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 AMIGO3Q86WK7 504 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 MCOLN2Q8IZK6 566 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 CAVIN3Q969G5 261 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 TMEM176AQ96HP8 235 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 NUDCD1Q96RS6 583 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 GMLQ99445 158 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 DDX50Q9BQ39 737 aaKnown RBP4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 TRIM51Q9BSJ1 452 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 CNPY3Q9BT09 278 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 MTG1Q9BT17 334 aaPredicted RBP4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 TLR10Q9BXR5 811 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 WHRNQ9P202 907 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 TBK1Q9UHD2 729 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 DSEQ9UL01 958 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 TTC7AQ9ULT0 858 aaPredicted RBP4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 COL1A2P08123 1366 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 ANKRD63C9JTQ0 380 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 ATP5HO75947 161 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 FBXO21O94952 628 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 SLURP2P0DP57 97 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 GLRA2P23416 452 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 RRM1P23921 792 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 NOVP48745 357 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 RAB27AP51159 221 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 BCAT1P54687 386 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 TPI1P60174 286 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 ACVR2BQ13705 512 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 ACAP1Q15027 740 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 PDK1Q15118 436 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 CCNG2Q16589 344 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 CBWD6Q4V339 395 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 CBWD3Q5JTY5 395 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 CBWD5Q5RIA9 395 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 SLC27A1Q6PCB7 646 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 WDR59Q6PJI9 974 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 ABHD15Q6UXT9 468 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 RAPH1Q70E73 1250 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 ZDHHC17Q8IUH5 632 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 ARHGEF19Q8IW93 802 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 NDUFAF2Q8N183 169 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 ARHGAP18Q8N392 663 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 SLC20A1Q8WUM9 679 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 EFCC1Q9HA90 598 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 DNAJC17Q9NVM6 304 aaKnown RBP4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 TFR2Q9UP52 801 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 RRP15Q9Y3B9 282 aaKnown RBP4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 NCANO14594 1321 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 FZD9O00144 591 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 ZBTB39O15060 712 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 CREB3O43889 395 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 CST8O60676 142 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 DCTN3O75935 186 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 F9P00740 461 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 LGALS2P05162 132 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 RBP3P10745 1247 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 ODC1P11926 461 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 AKR1A1P14550 325 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 EIF4BP23588 611 aaKnown RBP4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 SLC8A1P32418 973 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 RGS7P49802 495 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 SERPINB9P50453 376 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 PAPOLAP51003 745 aaKnown RBP4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 PTENP60484 403 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 DEUP1Q05D60 604 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 PPP3CAQ08209 521 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 VEPH1Q14D04 833 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 SNX17Q15036 470 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 ZCWPW2Q504Y3 356 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 MAP1SQ66K74 1059 aaPredicted RBP4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 TTC19Q6DKK2 380 aaPredicted RBP4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 SLC47A2Q86VL8 602 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 FAM71AQ8IYT1 594 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 ZBED8Q8IZ13 594 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 GLIS3Q8NEA6 775 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 CLEC4DQ8WXI8 215 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 SHC3Q92529 594 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 TATDN2Q93075 761 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 CYFIP2Q96F07 1278 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 MFSD14AQ96MC6 490 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 RBM15Q96T37 977 aaKnown RBP eCLIP4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 POP1Q99575 1024 aaKnown RBP4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 FUT8Q9BYC5 575 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 PLEKHA5Q9HAU0 1116 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 PRDM16Q9HAZ2 1276 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 BARX2Q9UMQ3 279 aaPredicted RBP4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 NWD2Q9ULI1 1742 aa4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 CICQ96RK0 1608 aaPredicted RBP4.98□□□□□ -1.61
PCDH11X-207ENST00000406881 ATMINO43313 823 aaPredicted RBP4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 HOXA2O43364 376 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 ATP9AO75110 1047 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 PPP1R37O75864 691 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 PDGFRBP09619 1106 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 HSPA9P38646 679 aaKnown RBP4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 LHX1P48742 406 aa4.97□□□□□ -1.61
PCDH11X-207ENST00000406881 PSEN2P49810 448 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms