RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 RBM15Q96T37 977 aaKnown RBP eCLIP12.57□□□□□ -0.4
SMCR8-201ENST00000406438 ECSITQ9BQ95 431 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 PCMTD2Q9NV79 361 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 RIC8BQ9NVN3 520 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 CPSF1Q10570 1443 aaKnown RBP12.57□□□□□ -0.4
SMCR8-201ENST00000406438 DYRK3O43781 588 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 H2AFYO75367 372 aaKnown RBP12.57□□□□□ -0.4
SMCR8-201ENST00000406438 ITGA4P13612 1032 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 POLD3Q15054 466 aaPredicted RBP12.57□□□□□ -0.4
SMCR8-201ENST00000406438 C16orf62Q7Z3J2 963 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 SMARCAL1Q9NZC9 954 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 PAK5Q9P286 719 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 DNAJC5BQ9UF47 199 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 CLTCL1P53675 1640 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 C6orf222P0C671 652 aaPredicted RBP12.57□□□□□ -0.4
SMCR8-201ENST00000406438 SLC18A3Q16572 532 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 ANKS6Q68DC2 871 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 ZNF280CQ8ND82 737 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 ANKRD49Q8WVL7 239 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 WNK4Q96J92 1243 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 OSBPL5Q9H0X9 879 aaPredicted RBP12.57□□□□□ -0.4
SMCR8-201ENST00000406438 RANBP17Q9H2T7 1088 aaKnown RBP12.57□□□□□ -0.4
SMCR8-201ENST00000406438 AAASQ9NRG9 546 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 AGTP01019 485 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 SOX6P35712 828 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 RGS7P49802 495 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 POU4F1Q01851 419 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 OXER1Q8TDS5 423 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 TFB1MQ8WVM0 346 aaKnown RBP12.57□□□□□ -0.4
SMCR8-201ENST00000406438 INPP5DQ92835 1189 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 MTA3Q9BTC8 594 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 APOL5Q9BWW9 433 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 TEX13BQ9BXU2 312 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 HPS4Q9NQG7 708 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 hCG_2014768A0A024R1R8 64 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 DARSP14868 501 aaKnown RBP12.57□□□□□ -0.4
SMCR8-201ENST00000406438 ITIH2P19823 946 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 FMO5P49326 533 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 KCNK10P57789 538 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 TRIM71Q2Q1W2 868 aaKnown RBP12.57□□□□□ -0.4
SMCR8-201ENST00000406438 LUZP2Q86TE4 346 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 PRPF39Q86UA1 669 aaKnown RBP12.57□□□□□ -0.4
SMCR8-201ENST00000406438 RIBC1Q8N443 379 aaPredicted RBP12.57□□□□□ -0.4
SMCR8-201ENST00000406438 HMGCS2P54868 508 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 ALDH6A1Q02252 535 aaKnown RBP12.57□□□□□ -0.4
SMCR8-201ENST00000406438 LRRC36Q1X8D7 754 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 FAM83EQ2M2I3 478 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 SETD3Q86TU7 594 aaPredicted RBP12.57□□□□□ -0.4
SMCR8-201ENST00000406438 DEPDC7Q96QD5 511 aa12.57□□□□□ -0.4
SMCR8-201ENST00000406438 METP08581 1390 aa12.56□□□□□ -0.4
SMCR8-201ENST00000406438 NPHP3-ACAD11A0A0J9YXS1 232 aa12.56□□□□□ -0.4
SMCR8-201ENST00000406438 FAM47E-STBD1D6RA91 191 aa12.56□□□□□ -0.4
SMCR8-201ENST00000406438 H7C1W4 665 aa12.56□□□□□ -0.4
SMCR8-201ENST00000406438 NBNO60934 754 aa12.56□□□□□ -0.4
SMCR8-201ENST00000406438 RPS6KA5O75582 802 aa12.56□□□□□ -0.4
SMCR8-201ENST00000406438 TDP2O95551 362 aa12.56□□□□□ -0.4
SMCR8-201ENST00000406438 NCAM1P13591 858 aa12.56□□□□□ -0.4
SMCR8-201ENST00000406438 PTK7Q13308 1070 aa12.56□□□□□ -0.4
SMCR8-201ENST00000406438 EPHA7Q15375 998 aa12.56□□□□□ -0.4
SMCR8-201ENST00000406438 ALX1Q15699 326 aa12.56□□□□□ -0.4
SMCR8-201ENST00000406438 CLEC16AQ2KHT3 1053 aa12.56□□□□□ -0.4
SMCR8-201ENST00000406438 XKR3Q5GH77 459 aa12.56□□□□□ -0.4
SMCR8-201ENST00000406438 TRAF7Q6Q0C0 670 aa12.56□□□□□ -0.4
SMCR8-201ENST00000406438 ZNF438Q7Z4V0 828 aa12.56□□□□□ -0.4
SMCR8-201ENST00000406438 VPS50Q96JG6 964 aa12.56□□□□□ -0.4
SMCR8-201ENST00000406438 PARK7Q99497 189 aaKnown RBP12.56□□□□□ -0.4
SMCR8-201ENST00000406438 CCDC134Q9H6E4 229 aa12.56□□□□□ -0.4
SMCR8-201ENST00000406438 MTO1Q9Y2Z2 717 aaKnown RBP12.56□□□□□ -0.4
SMCR8-201ENST00000406438 KDM6BO15054 1643 aa12.56□□□□□ -0.4
SMCR8-201ENST00000406438 IGSF9BQ9UPX0 1349 aa12.56□□□□□ -0.4
SMCR8-201ENST00000406438 KLC1Q07866 573 aa12.56□□□□□ -0.4
SMCR8-201ENST00000406438 CNTN1Q12860 1018 aa12.56□□□□□ -0.4
SMCR8-201ENST00000406438 TMEM143Q96AN5 459 aa12.56□□□□□ -0.4
SMCR8-201ENST00000406438 ZC3H13Q5T200 1668 aaKnown RBP12.56□□□□□ -0.4
SMCR8-201ENST00000406438 C2orf81A6NN90 581 aa12.56□□□□□ -0.4
SMCR8-201ENST00000406438 AIM2O14862 343 aa12.56□□□□□ -0.4
SMCR8-201ENST00000406438 GH1P01241 217 aa12.56□□□□□ -0.4
SMCR8-201ENST00000406438 ATP1A1P05023 1023 aaKnown RBP12.56□□□□□ -0.4
SMCR8-201ENST00000406438 VCLP18206 1134 aa12.56□□□□□ -0.4
SMCR8-201ENST00000406438 OR1G1P47890 313 aa12.56□□□□□ -0.4
SMCR8-201ENST00000406438 TTLL9Q3SXZ7 439 aa12.56□□□□□ -0.4
SMCR8-201ENST00000406438 VMP1Q96GC9 406 aa12.56□□□□□ -0.4
SMCR8-201ENST00000406438 FOXP3Q9BZS1 431 aa12.56□□□□□ -0.4
SMCR8-201ENST00000406438 FHOD1Q9Y613 1164 aa12.56□□□□□ -0.4
SMCR8-201ENST00000406438 ARID5BQ14865 1188 aa12.56□□□□□ -0.4
SMCR8-201ENST00000406438 MRPL48Q96GC5 212 aaKnown RBP12.56□□□□□ -0.4
SMCR8-201ENST00000406438 CINPQ9BW66 212 aaPredicted RBP12.56□□□□□ -0.4
SMCR8-201ENST00000406438 A2ML1A8K2U0 1454 aa12.56□□□□□ -0.4
SMCR8-201ENST00000406438 NDUFB5O43674 189 aa12.56□□□□□ -0.4
SMCR8-201ENST00000406438 CAND2O75155 1236 aa12.56□□□□□ -0.4
SMCR8-201ENST00000406438 LRG1P02750 347 aa12.56□□□□□ -0.4
SMCR8-201ENST00000406438 TDRD10Q5VZ19 366 aaKnown RBP12.56□□□□□ -0.4
SMCR8-201ENST00000406438 NT5DC4Q86YG4 428 aa12.56□□□□□ -0.4
SMCR8-201ENST00000406438 C10orf53Q8N6V4 93 aa12.56□□□□□ -0.4
SMCR8-201ENST00000406438 ERAP1Q9NZ08 941 aa12.56□□□□□ -0.4
SMCR8-201ENST00000406438 RNF103O00237 685 aa12.56□□□□□ -0.4
SMCR8-201ENST00000406438 SRP72O76094 671 aaKnown RBP12.56□□□□□ -0.4
SMCR8-201ENST00000406438 ALDH7A1P49419 539 aaKnown RBP12.56□□□□□ -0.4
SMCR8-201ENST00000406438 TMEM62Q0P6H9 643 aa12.56□□□□□ -0.4
SMCR8-201ENST00000406438 SP8Q8IXZ3 490 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms