RNA–Protein interactions for RNA: ENST00000406434.5

FAM49A-202, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49A, Length 1,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-202ENST00000406434 CGNQ9P2M7 1197 aaKnown RBP11.15□□□□□ -0.63
FAM49A-202ENST00000406434 DNMT3BQ9UBC3 853 aaKnown RBP11.15□□□□□ -0.63
FAM49A-202ENST00000406434 RAPGEFL1Q9UHV5 662 aa11.15□□□□□ -0.63
FAM49A-202ENST00000406434 DSEQ9UL01 958 aa11.15□□□□□ -0.63
FAM49A-202ENST00000406434 SLC27A5Q9Y2P5 690 aa11.15□□□□□ -0.63
FAM49A-202ENST00000406434 MUC3AQ02505 3323 aa11.14□□□□□ -0.63
FAM49A-202ENST00000406434 TMEM221A6NGB7 291 aa11.14□□□□□ -0.63
FAM49A-202ENST00000406434 M0R296 226 aa11.14□□□□□ -0.63
FAM49A-202ENST00000406434 PTPN2P17706 415 aa11.14□□□□□ -0.63
FAM49A-202ENST00000406434 COL9A1P20849 921 aa11.14□□□□□ -0.63
FAM49A-202ENST00000406434 PNPLA4P41247 253 aa11.14□□□□□ -0.63
FAM49A-202ENST00000406434 CYP24A1Q07973 514 aa11.14□□□□□ -0.63
FAM49A-202ENST00000406434 TWF1Q12792 350 aa11.14□□□□□ -0.63
FAM49A-202ENST00000406434 DPYDQ12882 1025 aa11.14□□□□□ -0.63
FAM49A-202ENST00000406434 DUSP4Q13115 394 aa11.14□□□□□ -0.63
FAM49A-202ENST00000406434 PABPC1LQ4VXU2 614 aaKnown RBP11.14□□□□□ -0.63
FAM49A-202ENST00000406434 TRIM67Q6ZTA4 783 aa11.14□□□□□ -0.63
FAM49A-202ENST00000406434 TCEAL8Q8IYN2 117 aa11.14□□□□□ -0.63
FAM49A-202ENST00000406434 FMR1NBQ8N0W7 255 aaPredicted RBP11.14□□□□□ -0.63
FAM49A-202ENST00000406434 ITFG1Q8TB96 612 aa11.14□□□□□ -0.63
FAM49A-202ENST00000406434 GOLGA5Q8TBA6 731 aa11.14□□□□□ -0.63
FAM49A-202ENST00000406434 ING5Q8WYH8 240 aa11.14□□□□□ -0.63
FAM49A-202ENST00000406434 ZNF512Q96ME7 567 aaPredicted RBP11.14□□□□□ -0.63
FAM49A-202ENST00000406434 SMOC2Q9H3U7 446 aa11.14□□□□□ -0.63
FAM49A-202ENST00000406434 KCNK12Q9HB15 430 aa11.14□□□□□ -0.63
FAM49A-202ENST00000406434 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.14□□□□□ -0.63
FAM49A-202ENST00000406434 SIX4Q9UIU6 781 aa11.14□□□□□ -0.63
FAM49A-202ENST00000406434 ITGA11Q9UKX5 1188 aa11.14□□□□□ -0.63
FAM49A-202ENST00000406434 SORCS3Q9UPU3 1222 aa11.14□□□□□ -0.63
FAM49A-202ENST00000406434 PCDHGA10Q9Y5H3 936 aa11.14□□□□□ -0.63
FAM49A-202ENST00000406434 SNX9Q9Y5X1 595 aa11.14□□□□□ -0.63
FAM49A-202ENST00000406434 PRR33A8MZF0 331 aa11.13□□□□□ -0.63
FAM49A-202ENST00000406434 CALUO43852 315 aaPredicted RBP11.13□□□□□ -0.63
FAM49A-202ENST00000406434 HUS1O60921 280 aa11.13□□□□□ -0.63
FAM49A-202ENST00000406434 RHOBTB3O94955 611 aa11.13□□□□□ -0.63
FAM49A-202ENST00000406434 PAPLNO95428 1278 aa11.13□□□□□ -0.63
FAM49A-202ENST00000406434 CYP11A1P05108 521 aa11.13□□□□□ -0.63
FAM49A-202ENST00000406434 RHOP08100 348 aa11.13□□□□□ -0.63
FAM49A-202ENST00000406434 LAMP2P13473 410 aa11.13□□□□□ -0.63
FAM49A-202ENST00000406434 MYO1EQ12965 1108 aa11.13□□□□□ -0.63
FAM49A-202ENST00000406434 GPR17Q13304 367 aa11.13□□□□□ -0.63
FAM49A-202ENST00000406434 PNOCQ13519 176 aa11.13□□□□□ -0.63
FAM49A-202ENST00000406434 MTMR3Q13615 1198 aa11.13□□□□□ -0.63
FAM49A-202ENST00000406434 MYBPC2Q14324 1141 aa11.13□□□□□ -0.63
FAM49A-202ENST00000406434 PSMD6Q15008 389 aa11.13□□□□□ -0.63
FAM49A-202ENST00000406434 SLC39A12Q504Y0 691 aa11.13□□□□□ -0.63
FAM49A-202ENST00000406434 IQCEQ6IPM2 695 aa11.13□□□□□ -0.63
FAM49A-202ENST00000406434 TRAPPC11Q7Z392 1133 aa11.13□□□□□ -0.63
FAM49A-202ENST00000406434 WDR49Q8IV35 697 aa11.13□□□□□ -0.63
FAM49A-202ENST00000406434 ELMOD1Q8N336 334 aa11.13□□□□□ -0.63
FAM49A-202ENST00000406434 LRRC52Q8N7C0 313 aa11.13□□□□□ -0.63
FAM49A-202ENST00000406434 ATAD1Q8NBU5 361 aa11.13□□□□□ -0.63
FAM49A-202ENST00000406434 OR10T2Q8NGX3 314 aa11.13□□□□□ -0.63
FAM49A-202ENST00000406434 RSAD2Q8WXG1 361 aa11.13□□□□□ -0.63
FAM49A-202ENST00000406434 PBXIP1Q96AQ6 731 aa11.13□□□□□ -0.63
FAM49A-202ENST00000406434 MCRS1Q96EZ8 462 aa11.13□□□□□ -0.63
FAM49A-202ENST00000406434 HPDLQ96IR7 371 aa11.13□□□□□ -0.63
FAM49A-202ENST00000406434 MRPS23Q9Y3D9 190 aaKnown RBP11.13□□□□□ -0.63
FAM49A-202ENST00000406434 INSL5Q9Y5Q6 135 aa11.13□□□□□ -0.63
FAM49A-202ENST00000406434 PTPRJQ12913 1337 aa11.13□□□□□ -0.63
FAM49A-202ENST00000406434 TRIOO75962 3097 aa11.12□□□□□ -0.63
FAM49A-202ENST00000406434 MTMR11A4FU01 709 aa11.12□□□□□ -0.63
FAM49A-202ENST00000406434 PDXKO00764 312 aa11.12□□□□□ -0.63
FAM49A-202ENST00000406434 PHACTR2O75167 634 aa11.12□□□□□ -0.63
FAM49A-202ENST00000406434 PRPF40AO75400 957 aaKnown RBP11.12□□□□□ -0.63
FAM49A-202ENST00000406434 SOAT2O75908 522 aa11.12□□□□□ -0.63
FAM49A-202ENST00000406434 CLSTN1O94985 981 aa11.12□□□□□ -0.63
FAM49A-202ENST00000406434 KIF20AO95235 890 aa11.12□□□□□ -0.63
FAM49A-202ENST00000406434 CST3P01034 146 aaPredicted RBP11.12□□□□□ -0.63
FAM49A-202ENST00000406434 NR3C1P04150 777 aa11.12□□□□□ -0.63
FAM49A-202ENST00000406434 ALDH1A3P47895 512 aa11.12□□□□□ -0.63
FAM49A-202ENST00000406434 CASP4P49662 377 aa11.12□□□□□ -0.63
FAM49A-202ENST00000406434 EPHB3P54753 998 aa11.12□□□□□ -0.63
FAM49A-202ENST00000406434 SIGLEC14Q08ET2 396 aa11.12□□□□□ -0.63
FAM49A-202ENST00000406434 TRPC3Q13507 836 aa11.12□□□□□ -0.63
FAM49A-202ENST00000406434 TDGQ13569 410 aa11.12□□□□□ -0.63
FAM49A-202ENST00000406434 CYP4A22Q5TCH4 519 aa11.12□□□□□ -0.63
FAM49A-202ENST00000406434 CEP135Q66GS9 1140 aa11.12□□□□□ -0.63
FAM49A-202ENST00000406434 CENPPQ6IPU0 288 aa11.12□□□□□ -0.63
FAM49A-202ENST00000406434 HFE2Q6ZVN8 426 aa11.12□□□□□ -0.63
FAM49A-202ENST00000406434 LRRTM3Q86VH5 581 aa11.12□□□□□ -0.63
FAM49A-202ENST00000406434 C12orf56Q8IXR9 622 aa11.12□□□□□ -0.63
FAM49A-202ENST00000406434 UBALD2Q8IYN6 164 aa11.12□□□□□ -0.63
FAM49A-202ENST00000406434 PDCL2Q8N4E4 241 aa11.12□□□□□ -0.63
FAM49A-202ENST00000406434 FAM200AQ8TCP9 573 aa11.12□□□□□ -0.63
FAM49A-202ENST00000406434 ZNF516Q92618 1163 aa11.12□□□□□ -0.63
FAM49A-202ENST00000406434 ERCC4Q92889 916 aaPredicted RBP11.12□□□□□ -0.63
FAM49A-202ENST00000406434 FGF13Q92913 245 aa11.12□□□□□ -0.63
FAM49A-202ENST00000406434 MFSD14AQ96MC6 490 aa11.12□□□□□ -0.63
FAM49A-202ENST00000406434 MMS19Q96T76 1030 aa11.12□□□□□ -0.63
FAM49A-202ENST00000406434 CGRRF1Q99675 332 aa11.12□□□□□ -0.63
FAM49A-202ENST00000406434 EPAS1Q99814 870 aa11.12□□□□□ -0.63
FAM49A-202ENST00000406434 RTP3Q9BQQ7 232 aa11.12□□□□□ -0.63
FAM49A-202ENST00000406434 ZCWPW1Q9H0M4 648 aa11.12□□□□□ -0.63
FAM49A-202ENST00000406434 KCTD10Q9H3F6 313 aa11.12□□□□□ -0.63
FAM49A-202ENST00000406434 IGSF9Q9P2J2 1179 aa11.12□□□□□ -0.63
FAM49A-202ENST00000406434 EPS15L1Q9UBC2 864 aa11.12□□□□□ -0.63
FAM49A-202ENST00000406434 CDH7Q9ULB5 785 aa11.12□□□□□ -0.63
FAM49A-202ENST00000406434 MAFFQ9ULX9 164 aa11.12□□□□□ -0.63
FAM49A-202ENST00000406434 DENND4AQ7Z401 1863 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms