RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 FAXDC2Q96IV6 333 aa31.43■■■□□ 2.62
USP42-202ENST00000404008 BCO2Q9BYV7 579 aa31.43■■■□□ 2.62
USP42-202ENST00000404008 SMYD3Q9H7B4 428 aa31.43■■■□□ 2.62
USP42-202ENST00000404008 PLXNA3P51805 1871 aa31.43■■■□□ 2.62
USP42-202ENST00000404008 TACC1O75410 805 aa31.43■■■□□ 2.62
USP42-202ENST00000404008 RPL17P18621 184 aaKnown RBP31.43■■■□□ 2.62
USP42-202ENST00000404008 EXOC3L4Q17RC7 722 aa31.43■■■□□ 2.62
USP42-202ENST00000404008 CTXN3Q4LDR2 81 aa31.43■■■□□ 2.62
USP42-202ENST00000404008 TATDN2Q93075 761 aa31.43■■■□□ 2.62
USP42-202ENST00000404008 KLHL5Q96PQ7 755 aa31.43■■■□□ 2.62
USP42-202ENST00000404008 CLSTN3Q9BQT9 956 aa31.43■■■□□ 2.62
USP42-202ENST00000404008 EMILIN2Q9BXX0 1053 aa31.43■■■□□ 2.62
USP42-202ENST00000404008 LGALS16A8MUM7 142 aa31.42■■■□□ 2.62
USP42-202ENST00000404008 GABRDO14764 452 aa31.42■■■□□ 2.62
USP42-202ENST00000404008 TEX28O15482 410 aa31.42■■■□□ 2.62
USP42-202ENST00000404008 FAM163BP0C2L3 166 aa31.42■■■□□ 2.62
USP42-202ENST00000404008 WARSP23381 471 aaKnown RBP31.42■■■□□ 2.62
USP42-202ENST00000404008 RSPO2Q6UXX9 243 aaPredicted RBP31.42■■■□□ 2.62
USP42-202ENST00000404008 OSTM1Q86WC4 334 aa31.42■■■□□ 2.62
USP42-202ENST00000404008 RTP3Q9BQQ7 232 aa31.42■■■□□ 2.62
USP42-202ENST00000404008 MRPL45Q9BRJ2 306 aaKnown RBP31.42■■■□□ 2.62
USP42-202ENST00000404008 OXCT2Q9BYC2 517 aaPredicted RBP31.42■■■□□ 2.62
USP42-202ENST00000404008 SDCBP2Q9H190 292 aa31.42■■■□□ 2.62
USP42-202ENST00000404008 FBXL5Q9UKA1 691 aa31.42■■■□□ 2.62
USP42-202ENST00000404008 FOSL2P15408 326 aa31.41■■■□□ 2.62
USP42-202ENST00000404008 SLC9A1P19634 815 aa31.41■■■□□ 2.62
USP42-202ENST00000404008 RAP1GAPP47736 663 aa31.41■■■□□ 2.62
USP42-202ENST00000404008 NDUFV1P49821 464 aa31.41■■■□□ 2.62
USP42-202ENST00000404008 CDH8P55286 799 aa31.41■■■□□ 2.62
USP42-202ENST00000404008 LRMPQ12912 555 aa31.41■■■□□ 2.62
USP42-202ENST00000404008 TRIM65Q6PJ69 517 aa31.41■■■□□ 2.62
USP42-202ENST00000404008 NT5C1BQ96P26 610 aa31.41■■■□□ 2.62
USP42-202ENST00000404008 CDY1Q9Y6F8 540 aa31.41■■■□□ 2.62
USP42-202ENST00000404008 ADAM12O43184 909 aa31.4■■■□□ 2.62
USP42-202ENST00000404008 PON1P27169 355 aa31.4■■■□□ 2.62
USP42-202ENST00000404008 LHX1P48742 406 aa31.4■■■□□ 2.62
USP42-202ENST00000404008 TCEAL5Q5H9L2 206 aa31.4■■■□□ 2.62
USP42-202ENST00000404008 FKBP15Q5T1M5 1219 aa31.4■■■□□ 2.62
USP42-202ENST00000404008 SLC8B1Q6J4K2 584 aa31.4■■■□□ 2.62
USP42-202ENST00000404008 GAS2L3Q86XJ1 694 aa31.4■■■□□ 2.62
USP42-202ENST00000404008 THEM5Q8N1Q8 247 aa31.4■■■□□ 2.62
USP42-202ENST00000404008 PPP2R3CQ969Q6 453 aa31.4■■■□□ 2.62
USP42-202ENST00000404008 TLE6Q9H808 572 aa31.4■■■□□ 2.62
USP42-202ENST00000404008 DDX43Q9NXZ2 648 aaKnown RBP31.4■■■□□ 2.62
USP42-202ENST00000404008 WEE2P0C1S8 567 aa31.39■■■□□ 2.62
USP42-202ENST00000404008 KCNMA1Q12791 1236 aa31.39■■■□□ 2.62
USP42-202ENST00000404008 RBM23Q86U06 439 aaKnown RBP31.39■■■□□ 2.62
USP42-202ENST00000404008 OR10T2Q8NGX3 314 aa31.39■■■□□ 2.62
USP42-202ENST00000404008 CYP3A43Q9HB55 503 aa31.39■■■□□ 2.62
USP42-202ENST00000404008 OR6C75A6NL08 312 aa31.38■■■□□ 2.61
USP42-202ENST00000404008 PER2O15055 1255 aa31.38■■■□□ 2.61
USP42-202ENST00000404008 CLASP2O75122 1294 aaKnown RBP31.38■■■□□ 2.61
USP42-202ENST00000404008 SERPINC1P01008 464 aa31.38■■■□□ 2.61
USP42-202ENST00000404008 ADH1AP07327 375 aa31.38■■■□□ 2.61
USP42-202ENST00000404008 OR1D2P34982 312 aa31.38■■■□□ 2.61
USP42-202ENST00000404008 NRIP1P48552 1158 aa31.38■■■□□ 2.61
USP42-202ENST00000404008 FANCCQ00597 558 aa31.38■■■□□ 2.61
USP42-202ENST00000404008 CUL2Q13617 745 aa31.38■■■□□ 2.61
USP42-202ENST00000404008 DUSP6Q16828 381 aa31.38■■■□□ 2.61
USP42-202ENST00000404008 GLYCTKQ8IVS8 523 aa31.38■■■□□ 2.61
USP42-202ENST00000404008 ARID3AQ99856 593 aa31.38■■■□□ 2.61
USP42-202ENST00000404008 SNX25Q9H3E2 840 aa31.38■■■□□ 2.61
USP42-202ENST00000404008 RTN4Q9NQC3 1192 aaKnown RBP31.38■■■□□ 2.61
USP42-202ENST00000404008 UBXN1Q04323 297 aa31.37■■■□□ 2.61
USP42-202ENST00000404008 PHLDB3Q6NSJ2 640 aa31.37■■■□□ 2.61
USP42-202ENST00000404008 ARHGEF19Q8IW93 802 aa31.37■■■□□ 2.61
USP42-202ENST00000404008 PPM1KQ8N3J5 372 aa31.37■■■□□ 2.61
USP42-202ENST00000404008 CDCA3Q99618 268 aaPredicted RBP31.37■■■□□ 2.61
USP42-202ENST00000404008 ACBD6Q9BR61 282 aa31.37■■■□□ 2.61
USP42-202ENST00000404008 RBSNQ9H1K0 784 aa31.37■■■□□ 2.61
USP42-202ENST00000404008 STXBP5LQ9Y2K9 1186 aa31.37■■■□□ 2.61
USP42-202ENST00000404008 NME7Q9Y5B8 376 aa31.37■■■□□ 2.61
USP42-202ENST00000404008 A0A1B0GTH6 734 aa31.36■■■□□ 2.61
USP42-202ENST00000404008 HCRTO43612 131 aa31.36■■■□□ 2.61
USP42-202ENST00000404008 TBXAS1P24557 533 aaPredicted RBP31.36■■■□□ 2.61
USP42-202ENST00000404008 LMO2P25791 158 aa31.36■■■□□ 2.61
USP42-202ENST00000404008 KLRC2P26717 231 aa31.36■■■□□ 2.61
USP42-202ENST00000404008 GNL1P36915 607 aaPredicted RBP31.36■■■□□ 2.61
USP42-202ENST00000404008 INCA1Q0VD86 236 aa31.36■■■□□ 2.61
USP42-202ENST00000404008 HYAL1Q12794 435 aa31.36■■■□□ 2.61
USP42-202ENST00000404008 RAB33AQ14088 237 aa31.36■■■□□ 2.61
USP42-202ENST00000404008 FILIP1LQ4L180 1135 aa31.36■■■□□ 2.61
USP42-202ENST00000404008 MICALL1Q8N3F8 863 aa31.36■■■□□ 2.61
USP42-202ENST00000404008 OR6B3Q8NGW1 331 aa31.36■■■□□ 2.61
USP42-202ENST00000404008 NAP1L5Q96NT1 182 aaPredicted RBP31.36■■■□□ 2.61
USP42-202ENST00000404008 SIX2Q9NPC8 291 aa31.36■■■□□ 2.61
USP42-202ENST00000404008 APEX2Q9UBZ4 518 aa31.36■■■□□ 2.61
USP42-202ENST00000404008 MTCL1Q9Y4B5 1905 aaKnown RBP31.35■■■□□ 2.61
USP42-202ENST00000404008 GTF2F1P35269 517 aaKnown RBP eCLIP31.35■■■□□ 2.61
USP42-202ENST00000404008 CLCN4P51793 760 aa31.35■■■□□ 2.61
USP42-202ENST00000404008 ROR1Q01973 937 aa31.35■■■□□ 2.61
USP42-202ENST00000404008 APBA1Q02410 837 aa31.35■■■□□ 2.61
USP42-202ENST00000404008 GCNT1Q02742 428 aa31.35■■■□□ 2.61
USP42-202ENST00000404008 DPY19L2P1Q6NXN4 242 aa31.35■■■□□ 2.61
USP42-202ENST00000404008 TMEM209Q96SK2 561 aa31.35■■■□□ 2.61
USP42-202ENST00000404008 ZCWPW1Q9H0M4 648 aa31.35■■■□□ 2.61
USP42-202ENST00000404008 FAM124BQ9H5Z6 455 aaPredicted RBP31.35■■■□□ 2.61
USP42-202ENST00000404008 ACAT1P24752 427 aaKnown RBP31.34■■■□□ 2.61
USP42-202ENST00000404008 PCSK1P29120 753 aa31.34■■■□□ 2.61
USP42-202ENST00000404008 RRAGAQ7L523 313 aa31.34■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms