RNA–Protein interactions for RNA: ENST00000399196.1

LINC00243-201, long intergenic non-protein coding RNA 243, humanhuman

TSL 2 BASIC

Gene LINC00243, Length 2,052 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00243-201ENST00000399196 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.05□□□□□ -0.8
LINC00243-201ENST00000399196 APOL6Q9BWW8 343 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 SDCBP2Q9H190 292 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 ERVK-5Q9HDB9 667 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 SNTG2Q9NY99 539 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 CNOT8Q9UFF9 292 aaKnown RBP10.05□□□□□ -0.8
LINC00243-201ENST00000399196 NOD1Q9Y239 953 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 CDY2AQ9Y6F7 541 aa10.05□□□□□ -0.8
LINC00243-201ENST00000399196 H3BQF6 201 aa10.04□□□□□ -0.8
LINC00243-201ENST00000399196 TPD52L2O43399 206 aaKnown RBP10.04□□□□□ -0.8
LINC00243-201ENST00000399196 ATP8B1O43520 1251 aa10.04□□□□□ -0.8
LINC00243-201ENST00000399196 GJB6O95452 261 aa10.04□□□□□ -0.8
LINC00243-201ENST00000399196 MYCP01106 439 aaPredicted RBP10.04□□□□□ -0.8
LINC00243-201ENST00000399196 RPLP2P05387 115 aaKnown RBP10.04□□□□□ -0.8
LINC00243-201ENST00000399196 RAP1GAPP47736 663 aa10.04□□□□□ -0.8
LINC00243-201ENST00000399196 PRMT2P55345 433 aa10.04□□□□□ -0.8
LINC00243-201ENST00000399196 CENPCQ03188 943 aa10.04□□□□□ -0.8
LINC00243-201ENST00000399196 CASP8Q14790 479 aa10.04□□□□□ -0.8
LINC00243-201ENST00000399196 PTGISQ16647 500 aa10.04□□□□□ -0.8
LINC00243-201ENST00000399196 WDR72Q3MJ13 1102 aa10.04□□□□□ -0.8
LINC00243-201ENST00000399196 ZNF667Q5HYK9 610 aa10.04□□□□□ -0.8
LINC00243-201ENST00000399196 DAB2IPQ5VWQ8 1189 aa10.04□□□□□ -0.8
LINC00243-201ENST00000399196 C8orf74Q6P047 294 aa10.04□□□□□ -0.8
LINC00243-201ENST00000399196 NT5DC4Q86YG4 428 aa10.04□□□□□ -0.8
LINC00243-201ENST00000399196 MICAL1Q8TDZ2 1067 aa10.04□□□□□ -0.8
LINC00243-201ENST00000399196 AENQ8WTP8 325 aaKnown RBP10.04□□□□□ -0.8
LINC00243-201ENST00000399196 ZNF606Q8WXB4 792 aa10.04□□□□□ -0.8
LINC00243-201ENST00000399196 TFAP2BQ92481 460 aa10.04□□□□□ -0.8
LINC00243-201ENST00000399196 DDX47Q9H0S4 455 aaKnown RBP10.04□□□□□ -0.8
LINC00243-201ENST00000399196 PLEKHA5Q9HAU0 1116 aa10.04□□□□□ -0.8
LINC00243-201ENST00000399196 CISHQ9NSE2 258 aa10.04□□□□□ -0.8
LINC00243-201ENST00000399196 STIM2Q9P246 746 aa10.04□□□□□ -0.8
LINC00243-201ENST00000399196 NXF1Q9UBU9 619 aaKnown RBP10.04□□□□□ -0.8
LINC00243-201ENST00000399196 C2CD2Q9Y426 696 aa10.04□□□□□ -0.8
LINC00243-201ENST00000399196 HES2Q9Y543 173 aa10.04□□□□□ -0.8
LINC00243-201ENST00000399196 TRPV2Q9Y5S1 764 aa10.04□□□□□ -0.8
LINC00243-201ENST00000399196 SCN10AQ9Y5Y9 1956 aa10.04□□□□□ -0.8
LINC00243-201ENST00000399196 PGRMC1O00264 195 aaKnown RBP10.03□□□□□ -0.8
LINC00243-201ENST00000399196 RPS6KA5O75582 802 aa10.03□□□□□ -0.8
LINC00243-201ENST00000399196 CABYRO75952 493 aa10.03□□□□□ -0.8
LINC00243-201ENST00000399196 CARSP49589 748 aaKnown RBP10.03□□□□□ -0.8
LINC00243-201ENST00000399196 CDH8P55286 799 aa10.03□□□□□ -0.8
LINC00243-201ENST00000399196 YWHAEP62258 255 aaKnown RBP10.03□□□□□ -0.8
LINC00243-201ENST00000399196 MTFR1Q15390 333 aa10.03□□□□□ -0.8
LINC00243-201ENST00000399196 TWF2Q6IBS0 349 aaKnown RBP10.03□□□□□ -0.8
LINC00243-201ENST00000399196 ADAT2Q7Z6V5 191 aaKnown RBP10.03□□□□□ -0.8
LINC00243-201ENST00000399196 SERINC5Q86VE9 423 aa10.03□□□□□ -0.8
LINC00243-201ENST00000399196 ZNF677Q86XU0 584 aa10.03□□□□□ -0.8
LINC00243-201ENST00000399196 SREK1Q8WXA9 508 aaKnown RBP10.03□□□□□ -0.8
LINC00243-201ENST00000399196 RNPC3Q96LT9 517 aaKnown RBP10.03□□□□□ -0.8
LINC00243-201ENST00000399196 NXF3Q9H4D5 531 aaKnown RBP10.03□□□□□ -0.8
LINC00243-201ENST00000399196 HMX1Q9NP08 348 aaPredicted RBP10.03□□□□□ -0.8
LINC00243-201ENST00000399196 DPP3Q9NY33 737 aa10.03□□□□□ -0.8
LINC00243-201ENST00000399196 ITGA11Q9UKX5 1188 aa10.03□□□□□ -0.8
LINC00243-201ENST00000399196 BHMG1C9JSJ3 638 aaPredicted RBP10.03□□□□□ -0.8
LINC00243-201ENST00000399196 O00370 1275 aa10.03□□□□□ -0.8
LINC00243-201ENST00000399196 THAP12O43422 761 aa10.03□□□□□ -0.8
LINC00243-201ENST00000399196 ERLIN1O75477 346 aa10.03□□□□□ -0.8
LINC00243-201ENST00000399196 FGGP02679 453 aa10.03□□□□□ -0.8
LINC00243-201ENST00000399196 P4HA1P13674 534 aa10.03□□□□□ -0.8
LINC00243-201ENST00000399196 POLR2BP30876 1174 aaKnown RBP10.03□□□□□ -0.8
LINC00243-201ENST00000399196 ATICP31939 592 aa10.03□□□□□ -0.8
LINC00243-201ENST00000399196 THPOP40225 353 aa10.03□□□□□ -0.8
LINC00243-201ENST00000399196 ACLYP53396 1101 aa10.03□□□□□ -0.8
LINC00243-201ENST00000399196 NFX1Q12986 1120 aaKnown RBP10.03□□□□□ -0.8
LINC00243-201ENST00000399196 ORC1Q13415 861 aa10.03□□□□□ -0.8
LINC00243-201ENST00000399196 ITGA7Q13683 1181 aa10.03□□□□□ -0.8
LINC00243-201ENST00000399196 CCSAPQ6IQ19 270 aaPredicted RBP10.03□□□□□ -0.8
LINC00243-201ENST00000399196 WDTC1Q8N5D0 677 aa10.03□□□□□ -0.8
LINC00243-201ENST00000399196 GLT1D1Q96MS3 346 aa10.03□□□□□ -0.8
LINC00243-201ENST00000399196 TWNKQ96RR1 684 aa10.03□□□□□ -0.8
LINC00243-201ENST00000399196 C11orf70Q9BRQ4 267 aa10.03□□□□□ -0.8
LINC00243-201ENST00000399196 UNC93B1Q9H1C4 597 aa10.03□□□□□ -0.8
LINC00243-201ENST00000399196 CARD9Q9H257 536 aa10.03□□□□□ -0.8
LINC00243-201ENST00000399196 GDF3Q9NR23 364 aa10.03□□□□□ -0.8
LINC00243-201ENST00000399196 RNF19AQ9NV58 838 aa10.03□□□□□ -0.8
LINC00243-201ENST00000399196 PARP2Q9UGN5 583 aa10.03□□□□□ -0.8
LINC00243-201ENST00000399196 HMGXB4Q9UGU5 601 aa10.03□□□□□ -0.8
LINC00243-201ENST00000399196 TTC7AQ9ULT0 858 aaPredicted RBP10.03□□□□□ -0.8
LINC00243-201ENST00000399196 AGAP1Q9UPQ3 857 aa10.03□□□□□ -0.8
LINC00243-201ENST00000399196 TCRBV7S2A1N4TA0A589 114 aa10.02□□□□□ -0.81
LINC00243-201ENST00000399196 SART1O43290 800 aaKnown RBP10.02□□□□□ -0.81
LINC00243-201ENST00000399196 RECQL4O94761 1208 aa10.02□□□□□ -0.81
LINC00243-201ENST00000399196 HEXIM1O94992 359 aaKnown RBP10.02□□□□□ -0.81
LINC00243-201ENST00000399196 TUBBP07437 444 aa10.02□□□□□ -0.81
LINC00243-201ENST00000399196 FAM153BP0C7A2 387 aa10.02□□□□□ -0.81
LINC00243-201ENST00000399196 PYGMP11217 842 aa10.02□□□□□ -0.81
LINC00243-201ENST00000399196 AKAP5P24588 427 aa10.02□□□□□ -0.81
LINC00243-201ENST00000399196 CTCFP49711 727 aaPredicted RBP10.02□□□□□ -0.81
LINC00243-201ENST00000399196 RBP5P82980 135 aa10.02□□□□□ -0.81
LINC00243-201ENST00000399196 FAM153CQ494X1 144 aa10.02□□□□□ -0.81
LINC00243-201ENST00000399196 LHX8Q68G74 356 aa10.02□□□□□ -0.81
LINC00243-201ENST00000399196 MMS22LQ6ZRQ5 1243 aa10.02□□□□□ -0.81
LINC00243-201ENST00000399196 SESTD1Q86VW0 696 aa10.02□□□□□ -0.81
LINC00243-201ENST00000399196 FAM228AQ86W67 206 aa10.02□□□□□ -0.81
LINC00243-201ENST00000399196 WHAMMQ8TF30 809 aa10.02□□□□□ -0.81
LINC00243-201ENST00000399196 CASKIN2Q8WXE0 1202 aa10.02□□□□□ -0.81
LINC00243-201ENST00000399196 HPDLQ96IR7 371 aa10.02□□□□□ -0.81
LINC00243-201ENST00000399196 SNX27Q96L92 541 aa10.02□□□□□ -0.81
LINC00243-201ENST00000399196 RPS6KC1Q96S38 1066 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms