RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 ABHD16AO95870 558 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 SCGB1D1O95968 90 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 TK1P04183 234 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 CHGBP05060 677 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 PRKCBP05771 671 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 GNAI3P08754 354 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 H2AFB1P0C5Y9 115 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 H2AFB2P0C5Z0 115 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 SRGAP2BP0DMP2 458 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 TXNP10599 105 aaKnown RBP2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 IL1R1P14778 569 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 CPA1P15085 419 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 ELNP15502 786 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 FAHP16930 419 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 EGR1P18146 543 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 KLRC1P26715 233 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 APEX1P27695 318 aaKnown RBP2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 IL1R2P27930 398 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 MAPK4P31152 587 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 AKT1P31749 480 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 PGM1P36871 562 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 NNMTP40261 264 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 MLH1P40692 756 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 PHKA1P46020 1223 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 SLC6A11P48066 632 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 SLC6A9P48067 706 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 PIK3CGP48736 1102 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 MMP14P50281 582 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 AFF3P51826 1226 aaKnown RBP2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 PNLIPRP1P54315 467 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 GNAI1P63096 354 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 NOMO3P69849 1222 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 DLG4P78352 724 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 IFI35P80217 286 aaPredicted RBP2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 TMF1P82094 1093 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 PPARDQ03181 441 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 GALNT2Q10471 571 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 SCAPQ12770 1279 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 NFATC3Q12968 1075 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 MAMLD1Q13495 774 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 SCARB2Q14108 478 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 ADGRE1Q14246 886 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 TBCEQ15813 527 aaPredicted RBP2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 MAPKAPK3Q16644 382 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 MAN2A1Q16706 1144 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 ATP2B3Q16720 1220 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 CYP27C1Q4G0S4 372 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 GJC2Q5T442 439 aaPredicted RBP2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 TMTC4Q5T4D3 741 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 MAP3K21Q5TCX8 1036 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 SNX30Q5VWJ9 437 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 GPR139Q6DWJ6 353 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 OGFOD3Q6PK18 319 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 CASC1Q6TDU7 716 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 KLHL24Q6TFL4 600 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 CRTC1Q6UUV9 634 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 LRSAM1Q6UWE0 723 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 ABHD15Q6UXT9 468 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 ATF7IPQ6VMQ6 1270 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 MFSD6Q6ZSS7 791 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 PPP1R3FQ6ZSY5 799 aaPredicted RBP2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 BBS12Q6ZW61 710 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 KRT74Q7RTS7 529 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 MILR1Q7Z6M3 343 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 LCA5Q86VQ0 697 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 FAM90A1Q86YD7 464 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 DCP2Q8IU60 420 aaKnown RBP2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 TAGAPQ8N103 731 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 PQLC1Q8N2U9 271 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 TMEM130Q8N3G9 435 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 C17orf53Q8N3J3 647 aaPredicted RBP2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 SRBD1Q8N5C6 995 aaKnown RBP2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 SLC15A4Q8N697 577 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 VGLL2Q8N8G2 317 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 DCBLD1Q8N8Z6 715 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 OR1N1Q8NGS0 311 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 IFI44Q8TCB0 444 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 CPT1CQ8TCG5 803 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 TBC1D5Q92609 795 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 STAMQ92783 540 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 SNX21Q969T3 373 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 UTP4Q969X6 686 aaKnown RBP2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 SDCCAG3Q96C92 435 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 NSUN4Q96CB9 384 aaKnown RBP2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 NEIL1Q96FI4 390 aaPredicted RBP2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 FEM1CQ96JP0 617 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 TBC1D32Q96NH3 1257 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 TSPAN18Q96SJ8 248 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 GDF15Q99988 308 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 REEP2Q9BRK0 252 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 DESI2Q9BSY9 194 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 DDX23Q9BUQ8 820 aaKnown RBP2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 DPH1Q9BZG8 443 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 FTOQ9C0B1 505 aaKnown RBP eCLIP2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 XPO4Q9C0E2 1151 aaKnown RBP2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 PITHD1Q9GZP4 211 aaPredicted RBP2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 ABHD16BQ9H3Z7 469 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms