RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 SORBS3O60504 671 aa16.87■□□□□ 0.29
CHMP1A-201ENST00000397901 MAN1A1P33908 653 aa16.87■□□□□ 0.29
CHMP1A-201ENST00000397901 YARSP54577 528 aaKnown RBP16.87■□□□□ 0.29
CHMP1A-201ENST00000397901 IZUMO3Q5VZ72 239 aa16.87■□□□□ 0.29
CHMP1A-201ENST00000397901 POTEAQ6S8J7 498 aa16.87■□□□□ 0.29
CHMP1A-201ENST00000397901 SYDE1Q6ZW31 735 aaPredicted RBP16.87■□□□□ 0.29
CHMP1A-201ENST00000397901 ZNF365Q70YC5 407 aa16.87■□□□□ 0.29
CHMP1A-201ENST00000397901 HOMEZQ8IX15 550 aa16.87■□□□□ 0.29
CHMP1A-201ENST00000397901 MCOLN2Q8IZK6 566 aa16.87■□□□□ 0.29
CHMP1A-201ENST00000397901 LARGE2Q8N3Y3 721 aa16.87■□□□□ 0.29
CHMP1A-201ENST00000397901 DDX27Q96GQ7 796 aaKnown RBP16.87■□□□□ 0.29
CHMP1A-201ENST00000397901 RASA4BC9J798 803 aa16.87■□□□□ 0.29
CHMP1A-201ENST00000397901 PMM2O15305 246 aa16.87■□□□□ 0.29
CHMP1A-201ENST00000397901 RASA4O43374 803 aa16.87■□□□□ 0.29
CHMP1A-201ENST00000397901 CDH16O75309 829 aa16.87■□□□□ 0.29
CHMP1A-201ENST00000397901 ENTPD5O75356 428 aa16.87■□□□□ 0.29
CHMP1A-201ENST00000397901 SPAG7O75391 227 aa16.87■□□□□ 0.29
CHMP1A-201ENST00000397901 TAC1P20366 129 aa16.87■□□□□ 0.29
CHMP1A-201ENST00000397901 EPHB2P29323 1055 aa16.87■□□□□ 0.29
CHMP1A-201ENST00000397901 SSTR3P32745 418 aaPredicted RBP16.87■□□□□ 0.29
CHMP1A-201ENST00000397901 ABCD1P33897 745 aa16.87■□□□□ 0.29
CHMP1A-201ENST00000397901 SH3BGRP55822 239 aaPredicted RBP16.87■□□□□ 0.29
CHMP1A-201ENST00000397901 RASIP1Q5U651 963 aa16.87■□□□□ 0.29
CHMP1A-201ENST00000397901 SV2AQ7L0J3 742 aa16.87■□□□□ 0.29
CHMP1A-201ENST00000397901 ZC3H18Q86VM9 953 aaKnown RBP16.87■□□□□ 0.29
CHMP1A-201ENST00000397901 TMEM174Q8WUU8 243 aa16.87■□□□□ 0.29
CHMP1A-201ENST00000397901 PREBQ9HCU5 417 aa16.87■□□□□ 0.29
CHMP1A-201ENST00000397901 TBX20Q9UMR3 447 aa16.87■□□□□ 0.29
CHMP1A-201ENST00000397901 GMEB1Q9Y692 573 aa16.87■□□□□ 0.29
CHMP1A-201ENST00000397901 ADGRA3Q8IWK6 1321 aa16.86■□□□□ 0.29
CHMP1A-201ENST00000397901 NFIBO00712 420 aa16.86■□□□□ 0.29
CHMP1A-201ENST00000397901 NCKAP1LP55160 1127 aa16.86■□□□□ 0.29
CHMP1A-201ENST00000397901 CAV1Q03135 178 aa16.86■□□□□ 0.29
CHMP1A-201ENST00000397901 MCL1Q07820 350 aa16.86■□□□□ 0.29
CHMP1A-201ENST00000397901 STRN3Q13033 797 aa16.86■□□□□ 0.29
CHMP1A-201ENST00000397901 KPNB1Q14974 876 aaKnown RBP16.86■□□□□ 0.29
CHMP1A-201ENST00000397901 GSTA3Q16772 222 aa16.86■□□□□ 0.29
CHMP1A-201ENST00000397901 CNPY1Q3B7I2 92 aa16.86■□□□□ 0.29
CHMP1A-201ENST00000397901 XKR9Q5GH70 373 aa16.86■□□□□ 0.29
CHMP1A-201ENST00000397901 TMEM63BQ5T3F8 832 aa16.86■□□□□ 0.29
CHMP1A-201ENST00000397901 SNX30Q5VWJ9 437 aa16.86■□□□□ 0.29
CHMP1A-201ENST00000397901 MYLK4Q86YV6 388 aaPredicted RBP16.86■□□□□ 0.29
CHMP1A-201ENST00000397901 CCNJLQ8IV13 435 aa16.86■□□□□ 0.29
CHMP1A-201ENST00000397901 SCG3Q8WXD2 468 aaKnown RBP16.86■□□□□ 0.29
CHMP1A-201ENST00000397901 SLC7A6OSQ96CW6 309 aaPredicted RBP16.86■□□□□ 0.29
CHMP1A-201ENST00000397901 LRRC37BQ96QE4 947 aa16.86■□□□□ 0.29
CHMP1A-201ENST00000397901 CCDC28BQ9BUN5 200 aa16.86■□□□□ 0.29
CHMP1A-201ENST00000397901 PITPNM3Q9BZ71 974 aa16.86■□□□□ 0.29
CHMP1A-201ENST00000397901 KIAA1683Q9H0B3 1180 aa16.86■□□□□ 0.29
CHMP1A-201ENST00000397901 LGALS13Q9UHV8 139 aa16.86■□□□□ 0.29
CHMP1A-201ENST00000397901 CCPG1Q9ULG6 757 aa16.86■□□□□ 0.29
CHMP1A-201ENST00000397901 COQ4Q9Y3A0 265 aa16.86■□□□□ 0.29
CHMP1A-201ENST00000397901 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.86■□□□□ 0.29
CHMP1A-201ENST00000397901 TRAFD1O14545 582 aaPredicted RBP16.86■□□□□ 0.29
CHMP1A-201ENST00000397901 TCEA3O75764 348 aa16.86■□□□□ 0.29
CHMP1A-201ENST00000397901 SOX10P56693 466 aa16.86■□□□□ 0.29
CHMP1A-201ENST00000397901 TKFCQ3LXA3 575 aa16.86■□□□□ 0.29
CHMP1A-201ENST00000397901 HP1BP3Q5SSJ5 553 aaPredicted RBP16.86■□□□□ 0.29
CHMP1A-201ENST00000397901 GLIS2Q9BZE0 524 aaPredicted RBP16.86■□□□□ 0.29
CHMP1A-201ENST00000397901 AGO4Q9HCK5 861 aaKnown RBP16.86■□□□□ 0.29
CHMP1A-201ENST00000397901 USTQ9Y2C2 406 aa16.86■□□□□ 0.29
CHMP1A-201ENST00000397901 USH1CQ9Y6N9 552 aa16.86■□□□□ 0.29
CHMP1A-201ENST00000397901 ASTN2O75129 1339 aaPredicted RBP16.85■□□□□ 0.29
CHMP1A-201ENST00000397901 DENND3A2RUS2 1198 aa16.85■□□□□ 0.29
CHMP1A-201ENST00000397901 DCTN3O75935 186 aa16.85■□□□□ 0.29
CHMP1A-201ENST00000397901 POTEJP0CG39 1038 aa16.85■□□□□ 0.29
CHMP1A-201ENST00000397901 UNGP13051 313 aaPredicted RBP16.85■□□□□ 0.29
CHMP1A-201ENST00000397901 DPEP1P16444 411 aa16.85■□□□□ 0.29
CHMP1A-201ENST00000397901 CD58P19256 250 aa16.85■□□□□ 0.29
CHMP1A-201ENST00000397901 WDR4P57081 412 aaKnown RBP16.85■□□□□ 0.29
CHMP1A-201ENST00000397901 LMBRD2Q68DH5 695 aaPredicted RBP16.85■□□□□ 0.29
CHMP1A-201ENST00000397901 GSTA5Q7RTV2 222 aa16.85■□□□□ 0.29
CHMP1A-201ENST00000397901 PASD1Q8IV76 773 aa16.85■□□□□ 0.29
CHMP1A-201ENST00000397901 CDAN1Q8IWY9 1227 aa16.85■□□□□ 0.29
CHMP1A-201ENST00000397901 OGFOD1Q8N543 542 aa16.85■□□□□ 0.29
CHMP1A-201ENST00000397901 SPOCK2Q92563 424 aa16.85■□□□□ 0.29
CHMP1A-201ENST00000397901 IWS1Q96ST2 819 aa16.85■□□□□ 0.29
CHMP1A-201ENST00000397901 KLHL11Q9NVR0 708 aa16.85■□□□□ 0.29
CHMP1A-201ENST00000397901 LOXHD1Q8IVV2 1947 aa16.85■□□□□ 0.29
CHMP1A-201ENST00000397901 MARK3P27448 753 aa16.85■□□□□ 0.29
CHMP1A-201ENST00000397901 SESN3P58005 492 aa16.85■□□□□ 0.29
CHMP1A-201ENST00000397901 TAS2R40P59535 323 aa16.85■□□□□ 0.29
CHMP1A-201ENST00000397901 FKBP1CQ5VVH2 108 aa16.85■□□□□ 0.29
CHMP1A-201ENST00000397901 PPP1R21Q6ZMI0 780 aa16.85■□□□□ 0.29
CHMP1A-201ENST00000397901 ANKS1BQ7Z6G8 1248 aa16.85■□□□□ 0.29
CHMP1A-201ENST00000397901 TMEM161BQ8NDZ6 487 aa16.85■□□□□ 0.29
CHMP1A-201ENST00000397901 LZICQ8WZA0 190 aa16.85■□□□□ 0.29
CHMP1A-201ENST00000397901 POMGNT1Q8WZA1 660 aa16.85■□□□□ 0.29
CHMP1A-201ENST00000397901 CCDC77Q9BR77 488 aa16.85■□□□□ 0.29
CHMP1A-201ENST00000397901 SPATA16Q9BXB7 569 aa16.85■□□□□ 0.29
CHMP1A-201ENST00000397901 ST6GALNAC4Q9H4F1 302 aa16.85■□□□□ 0.29
CHMP1A-201ENST00000397901 TLE6Q9H808 572 aa16.85■□□□□ 0.29
CHMP1A-201ENST00000397901 HOMER2Q9NSB8 354 aa16.85■□□□□ 0.29
CHMP1A-201ENST00000397901 EXOC7Q9UPT5 735 aa16.85■□□□□ 0.29
CHMP1A-201ENST00000397901 CHKBQ9Y259 395 aa16.85■□□□□ 0.29
CHMP1A-201ENST00000397901 NEU2Q9Y3R4 380 aa16.85■□□□□ 0.29
CHMP1A-201ENST00000397901 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.85■□□□□ 0.29
CHMP1A-201ENST00000397901 DESP17661 470 aa16.84■□□□□ 0.29
CHMP1A-201ENST00000397901 NPTX2P47972 431 aa16.84■□□□□ 0.29
CHMP1A-201ENST00000397901 DNAJC3Q13217 504 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms