RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 FAM8A1Q9UBU6 413 aa16.19■□□□□ 0.18
LSS-202ENST00000397728 GYPCP04921 128 aa16.19■□□□□ 0.18
LSS-202ENST00000397728 ATICP31939 592 aa16.19■□□□□ 0.18
LSS-202ENST00000397728 SLC12A3P55017 1021 aa16.19■□□□□ 0.18
LSS-202ENST00000397728 NAB2Q15742 525 aa16.19■□□□□ 0.18
LSS-202ENST00000397728 C1orf186Q6ZWK4 172 aa16.19■□□□□ 0.18
LSS-202ENST00000397728 TRPV6Q9H1D0 765 aa16.19■□□□□ 0.18
LSS-202ENST00000397728 RBPJLQ9UBG7 517 aa16.19■□□□□ 0.18
LSS-202ENST00000397728 INHAP05111 366 aa16.19■□□□□ 0.18
LSS-202ENST00000397728 EXT2Q93063 718 aa16.19■□□□□ 0.18
LSS-202ENST00000397728 RNPC3Q96LT9 517 aaKnown RBP16.19■□□□□ 0.18
LSS-202ENST00000397728 RPRD1AQ96P16 312 aaPredicted RBP16.19■□□□□ 0.18
LSS-202ENST00000397728 SARS2Q9NP81 518 aaKnown RBP16.19■□□□□ 0.18
LSS-202ENST00000397728 MSRAQ9UJ68 235 aa16.19■□□□□ 0.18
LSS-202ENST00000397728 A0A087X0B3 334 aa16.19■□□□□ 0.18
LSS-202ENST00000397728 TISP43B9A030 160 aa16.19■□□□□ 0.18
LSS-202ENST00000397728 MAFO75444 373 aaPredicted RBP16.19■□□□□ 0.18
LSS-202ENST00000397728 SGPL1O95470 568 aa16.19■□□□□ 0.18
LSS-202ENST00000397728 MX2P20592 715 aa16.19■□□□□ 0.18
LSS-202ENST00000397728 CDH18Q13634 790 aa16.19■□□□□ 0.18
LSS-202ENST00000397728 MYBPC2Q14324 1141 aa16.19■□□□□ 0.18
LSS-202ENST00000397728 KCNA10Q16322 511 aa16.19■□□□□ 0.18
LSS-202ENST00000397728 JADE1Q6IE81 842 aa16.19■□□□□ 0.18
LSS-202ENST00000397728 SPDYE1Q8NFV5 336 aaPredicted RBP16.19■□□□□ 0.18
LSS-202ENST00000397728 ELMO3Q96BJ8 720 aa16.19■□□□□ 0.18
LSS-202ENST00000397728 EPHB2P29323 1055 aa16.18■□□□□ 0.18
LSS-202ENST00000397728 OAS2P29728 719 aaKnown RBP16.18■□□□□ 0.18
LSS-202ENST00000397728 BCAT1P54687 386 aa16.18■□□□□ 0.18
LSS-202ENST00000397728 CCDC62Q6P9F0 684 aa16.18■□□□□ 0.18
LSS-202ENST00000397728 MAP4K3Q8IVH8 894 aa16.18■□□□□ 0.18
LSS-202ENST00000397728 BRSK2Q8IWQ3 736 aa16.18■□□□□ 0.18
LSS-202ENST00000397728 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.18■□□□□ 0.18
LSS-202ENST00000397728 NFU1Q9UMS0 254 aa16.18■□□□□ 0.18
LSS-202ENST00000397728 DUSP11O75319 330 aaKnown RBP16.18■□□□□ 0.18
LSS-202ENST00000397728 SLC11A2P49281 568 aa16.18■□□□□ 0.18
LSS-202ENST00000397728 HIRAP54198 1017 aaPredicted RBP16.18■□□□□ 0.18
LSS-202ENST00000397728 PTPN11Q06124 597 aaPredicted RBP16.18■□□□□ 0.18
LSS-202ENST00000397728 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.18■□□□□ 0.184e-11■□□□□ 10
LSS-202ENST00000397728 CYP3A43Q9HB55 503 aa16.18■□□□□ 0.18
LSS-202ENST00000397728 OGFRQ9NZT2 677 aa16.18■□□□□ 0.18
LSS-202ENST00000397728 ST3GAL5Q9UNP4 418 aa16.18■□□□□ 0.18
LSS-202ENST00000397728 IFNAR2P48551 515 aa16.18■□□□□ 0.18
LSS-202ENST00000397728 MKRN4PQ13434 485 aaPredicted RBP16.18■□□□□ 0.18
LSS-202ENST00000397728 TMEM176AQ96HP8 235 aa16.18■□□□□ 0.18
LSS-202ENST00000397728 GPC4O75487 556 aa16.18■□□□□ 0.18
LSS-202ENST00000397728 PAPOLAP51003 745 aaKnown RBP16.18■□□□□ 0.18
LSS-202ENST00000397728 EFEMP1Q12805 493 aa16.18■□□□□ 0.18
LSS-202ENST00000397728 HP1BP3Q5SSJ5 553 aaPredicted RBP16.18■□□□□ 0.18
LSS-202ENST00000397728 SDE2Q6IQ49 451 aa16.18■□□□□ 0.18
LSS-202ENST00000397728 MMTAG2Q9BU76 263 aaKnown RBP16.18■□□□□ 0.18
LSS-202ENST00000397728 PDE4DIPQ5VU43 2346 aa16.17■□□□□ 0.18
LSS-202ENST00000397728 ANKRD63C9JTQ0 380 aa16.17■□□□□ 0.18
LSS-202ENST00000397728 MMP3P08254 477 aa16.17■□□□□ 0.18
LSS-202ENST00000397728 KPNA2P52292 529 aaKnown RBP16.17■□□□□ 0.18
LSS-202ENST00000397728 KCNA1Q09470 495 aa16.17■□□□□ 0.18
LSS-202ENST00000397728 CCDC137Q6PK04 289 aaKnown RBP16.17■□□□□ 0.18
LSS-202ENST00000397728 FEZF2Q8TBJ5 459 aa16.17■□□□□ 0.18
LSS-202ENST00000397728 C7orf43Q8WVR3 580 aa16.17■□□□□ 0.18
LSS-202ENST00000397728 CABS1Q96KC9 395 aa16.17■□□□□ 0.18
LSS-202ENST00000397728 WDCPQ9H6R7 721 aa16.17■□□□□ 0.18
LSS-202ENST00000397728 KCNN4O15554 427 aa16.17■□□□□ 0.18
LSS-202ENST00000397728 KRT14P02533 472 aa16.17■□□□□ 0.18
LSS-202ENST00000397728 UGCGQ16739 394 aa16.17■□□□□ 0.18
LSS-202ENST00000397728 PCDHB5Q9Y5E4 795 aa16.17■□□□□ 0.18
LSS-202ENST00000397728 TTLL13PA6NNM8 815 aa16.17■□□□□ 0.18
LSS-202ENST00000397728 A6NNZ2 444 aa16.17■□□□□ 0.18
LSS-202ENST00000397728 H0Y626 953 aa16.17■□□□□ 0.18
LSS-202ENST00000397728 SEPT4O43236 478 aa16.17■□□□□ 0.18
LSS-202ENST00000397728 ATP9BO43861 1147 aa16.17■□□□□ 0.18
LSS-202ENST00000397728 FUT2Q10981 343 aa16.17■□□□□ 0.18
LSS-202ENST00000397728 CAPSQ13938 189 aa16.17■□□□□ 0.18
LSS-202ENST00000397728 TUBB8Q3ZCM7 444 aa16.17■□□□□ 0.18
LSS-202ENST00000397728 RCOR2Q8IZ40 523 aa16.17■□□□□ 0.18
LSS-202ENST00000397728 ETNPPLQ8TBG4 499 aa16.17■□□□□ 0.18
LSS-202ENST00000397728 TATDN2Q93075 761 aa16.17■□□□□ 0.18
LSS-202ENST00000397728 C12orf42Q96LP6 360 aa16.17■□□□□ 0.18
LSS-202ENST00000397728 GMLQ99445 158 aa16.17■□□□□ 0.18
LSS-202ENST00000397728 GPR20Q99678 358 aa16.17■□□□□ 0.18
LSS-202ENST00000397728 IRX4P78413 519 aa16.16■□□□□ 0.18
LSS-202ENST00000397728 GKAP1Q5VSY0 366 aaPredicted RBP16.16■□□□□ 0.18
LSS-202ENST00000397728 TAS2R42Q7RTR8 314 aa16.16■□□□□ 0.18
LSS-202ENST00000397728 ATP6V0D2Q8N8Y2 350 aa16.16■□□□□ 0.18
LSS-202ENST00000397728 EMILIN2Q9BXX0 1053 aa16.16■□□□□ 0.18
LSS-202ENST00000397728 IRX2Q9BZI1 471 aaPredicted RBP16.16■□□□□ 0.18
LSS-202ENST00000397728 CATSPERBQ9H7T0 1116 aa16.16■□□□□ 0.18
LSS-202ENST00000397728 KPNA7A9QM74 516 aa16.16■□□□□ 0.18
LSS-202ENST00000397728 GPR25O00155 361 aa16.16■□□□□ 0.18
LSS-202ENST00000397728 MMEP08473 750 aa16.16■□□□□ 0.18
LSS-202ENST00000397728 NDST1P52848 882 aa16.16■□□□□ 0.18
LSS-202ENST00000397728 CDR2Q01850 454 aa16.16■□□□□ 0.18
LSS-202ENST00000397728 TWF1Q12792 350 aa16.16■□□□□ 0.18
LSS-202ENST00000397728 SYCP2LQ5T4T6 812 aa16.16■□□□□ 0.18
LSS-202ENST00000397728 AFDNP55196 1824 aaKnown RBP16.16■□□□□ 0.18
LSS-202ENST00000397728 SLC2A3P11169 496 aa16.16■□□□□ 0.18
LSS-202ENST00000397728 CYP11B1P15538 503 aa16.16■□□□□ 0.18
LSS-202ENST00000397728 APLP1P51693 650 aa16.16■□□□□ 0.18
LSS-202ENST00000397728 PMS1P54277 932 aaKnown RBP16.16■□□□□ 0.18
LSS-202ENST00000397728 LRRC8CQ8TDW0 803 aa16.16■□□□□ 0.18
LSS-202ENST00000397728 LPPQ93052 612 aa16.16■□□□□ 0.18
LSS-202ENST00000397728 CACYBPQ9HB71 228 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms