RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 ATP6V1C1P21283 382 aa14.07□□□□□ -0.16
TRIM40-207ENST00000396581 GCKP35557 465 aa14.07□□□□□ -0.16
TRIM40-207ENST00000396581 BPIFB4P59827 614 aa14.07□□□□□ -0.16
TRIM40-207ENST00000396581 CLDN10P78369 228 aa14.07□□□□□ -0.16
TRIM40-207ENST00000396581 ADCY1Q08828 1119 aa14.07□□□□□ -0.16
TRIM40-207ENST00000396581 PKN2Q16513 984 aaKnown RBP14.07□□□□□ -0.16
TRIM40-207ENST00000396581 PLEKHA7Q6IQ23 1121 aa14.07□□□□□ -0.16
TRIM40-207ENST00000396581 CYP4F22Q6NT55 531 aa14.07□□□□□ -0.16
TRIM40-207ENST00000396581 SAMD1Q6SPF0 538 aaPredicted RBP14.07□□□□□ -0.16
TRIM40-207ENST00000396581 USP50Q70EL3 339 aaPredicted RBP14.07□□□□□ -0.16
TRIM40-207ENST00000396581 ILDR2Q71H61 639 aa14.07□□□□□ -0.16
TRIM40-207ENST00000396581 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.07□□□□□ -0.16
TRIM40-207ENST00000396581 ASAP3Q8TDY4 903 aa14.07□□□□□ -0.16
TRIM40-207ENST00000396581 MICAL1Q8TDZ2 1067 aa14.07□□□□□ -0.16
TRIM40-207ENST00000396581 GPRC5CQ9NQ84 441 aa14.07□□□□□ -0.16
TRIM40-207ENST00000396581 ANKEF1Q9NU02 776 aa14.07□□□□□ -0.16
TRIM40-207ENST00000396581 AFG3L2Q9Y4W6 797 aa14.07□□□□□ -0.16
TRIM40-207ENST00000396581 GSTTP1A0A1W2PQM5 241 aa14.06□□□□□ -0.16
TRIM40-207ENST00000396581 SPAG7O75391 227 aa14.06□□□□□ -0.16
TRIM40-207ENST00000396581 LINGO3P0C6S8 592 aa14.06□□□□□ -0.16
TRIM40-207ENST00000396581 KRT5P13647 590 aa14.06□□□□□ -0.16
TRIM40-207ENST00000396581 NSFP46459 744 aaKnown RBP14.06□□□□□ -0.16
TRIM40-207ENST00000396581 SLC1A5Q15758 541 aa14.06□□□□□ -0.16
TRIM40-207ENST00000396581 CTC1Q2NKJ3 1217 aa14.06□□□□□ -0.16
TRIM40-207ENST00000396581 TRIM72Q6ZMU5 477 aa14.06□□□□□ -0.16
TRIM40-207ENST00000396581 APLFQ8IW19 511 aaPredicted RBP14.06□□□□□ -0.16
TRIM40-207ENST00000396581 ZNF483Q8TF39 744 aaPredicted RBP14.06□□□□□ -0.16
TRIM40-207ENST00000396581 SPIRE2Q8WWL2 714 aa14.06□□□□□ -0.16
TRIM40-207ENST00000396581 CLEC4DQ8WXI8 215 aa14.06□□□□□ -0.16
TRIM40-207ENST00000396581 CPA5Q8WXQ8 436 aa14.06□□□□□ -0.16
TRIM40-207ENST00000396581 SMC6Q96SB8 1091 aa14.06□□□□□ -0.16
TRIM40-207ENST00000396581 PHACTR1Q9C0D0 580 aa14.06□□□□□ -0.16
TRIM40-207ENST00000396581 SAYSD1Q9NPB0 183 aa14.06□□□□□ -0.16
TRIM40-207ENST00000396581 COL20A1Q9P218 1284 aa14.06□□□□□ -0.16
TRIM40-207ENST00000396581 ZMYND8Q9ULU4 1186 aaPredicted RBP14.06□□□□□ -0.16
TRIM40-207ENST00000396581 ADAMTS5Q9UNA0 930 aa14.06□□□□□ -0.16
TRIM40-207ENST00000396581 DRG1Q9Y295 367 aaKnown RBP14.06□□□□□ -0.16
TRIM40-207ENST00000396581 VWA5AO00534 786 aa14.06□□□□□ -0.16
TRIM40-207ENST00000396581 HGSO14964 777 aaPredicted RBP14.06□□□□□ -0.16
TRIM40-207ENST00000396581 ACADSP16219 412 aa14.06□□□□□ -0.16
TRIM40-207ENST00000396581 PTPN4P29074 926 aa14.06□□□□□ -0.16
TRIM40-207ENST00000396581 CDC25CP30307 473 aa14.06□□□□□ -0.16
TRIM40-207ENST00000396581 RPA3P35244 121 aaPredicted RBP14.06□□□□□ -0.16
TRIM40-207ENST00000396581 NPTX2P47972 431 aa14.06□□□□□ -0.16
TRIM40-207ENST00000396581 HMGCS2P54868 508 aa14.06□□□□□ -0.16
TRIM40-207ENST00000396581 MAMLD1Q13495 774 aa14.06□□□□□ -0.16
TRIM40-207ENST00000396581 MORF4L2Q15014 288 aa14.06□□□□□ -0.16
TRIM40-207ENST00000396581 TKFCQ3LXA3 575 aa14.06□□□□□ -0.16
TRIM40-207ENST00000396581 EAPPQ56P03 285 aaPredicted RBP14.06□□□□□ -0.16
TRIM40-207ENST00000396581 NAIF1Q69YI7 327 aaPredicted RBP14.06□□□□□ -0.16
TRIM40-207ENST00000396581 ANO7Q6IWH7 933 aa14.06□□□□□ -0.16
TRIM40-207ENST00000396581 OTOAQ7RTW8 1153 aa14.06□□□□□ -0.16
TRIM40-207ENST00000396581 PHF13Q86YI8 300 aaPredicted RBP14.06□□□□□ -0.16
TRIM40-207ENST00000396581 ZNF276Q8N554 614 aa14.06□□□□□ -0.16
TRIM40-207ENST00000396581 SAMD3Q8N6K7 520 aa14.06□□□□□ -0.16
TRIM40-207ENST00000396581 ALLCQ8N6M5 410 aa14.06□□□□□ -0.16
TRIM40-207ENST00000396581 KCNV2Q8TDN2 545 aa14.06□□□□□ -0.16
TRIM40-207ENST00000396581 LRRC8CQ8TDW0 803 aa14.06□□□□□ -0.16
TRIM40-207ENST00000396581 SLC24A3Q9HC58 644 aa14.06□□□□□ -0.16
TRIM40-207ENST00000396581 MRPL47Q9HD33 250 aaKnown RBP14.06□□□□□ -0.16
TRIM40-207ENST00000396581 MAP3K20Q9NYL2 800 aaKnown RBP14.06□□□□□ -0.16
TRIM40-207ENST00000396581 GLTPD2A6NH11 291 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 NDC80O14777 642 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 ZWINTO95229 277 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 CALCAP01258 141 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 LMNAP02545 664 aaKnown RBP14.05□□□□□ -0.16
TRIM40-207ENST00000396581 FGFR1P11362 822 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 PECAM1P16284 738 aaPredicted RBP14.05□□□□□ -0.16
TRIM40-207ENST00000396581 DSG3P32926 999 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 PTPN7P35236 360 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 RAD23BP54727 409 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 NOMO3P69849 1222 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 NFX1Q12986 1120 aaKnown RBP14.05□□□□□ -0.16
TRIM40-207ENST00000396581 UGCGQ16739 394 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 SGSM1Q2NKQ1 1148 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 EFHC2Q5JST6 749 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 LIN9Q5TKA1 542 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 DAB2IPQ5VWQ8 1189 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 PPP1R2P3Q6NXS1 205 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 LLGL2Q6P1M3 1020 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 DLK2Q6UY11 383 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 EP400NLQ6ZTU2 488 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 LONP2Q86WA8 852 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 MCF2L2Q86YR7 1114 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 GLIS1Q8NBF1 620 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 NUDCD1Q96RS6 583 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 FAM118BQ9BPY3 351 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 PAIP2Q9BPZ3 127 aaKnown RBP14.05□□□□□ -0.16
TRIM40-207ENST00000396581 OSBPL1AQ9BXW6 950 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 KIF9Q9HAQ2 790 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 C17orf75Q9HAS0 396 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 TBC1D22BQ9NU19 505 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 ADM5C9JUS6 153 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 ACO1P21399 889 aaKnown RBP14.05□□□□□ -0.16
TRIM40-207ENST00000396581 GARTP22102 1010 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 EPHB2P29323 1055 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 PSMC5P62195 406 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 MRPS35P82673 323 aaKnown RBP14.05□□□□□ -0.16
TRIM40-207ENST00000396581 MCL1Q07820 350 aa14.05□□□□□ -0.16
TRIM40-207ENST00000396581 VGLL4Q14135 290 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms