RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 UBR3Q6ZT12 1888 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 LOC100653049A0A140TA62 436 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 CBFA2T3O75081 653 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 KRT34O76011 436 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 RPL13P26373 211 aaKnown RBP8.85□□□□□ -0.99
NDE1-202ENST00000396355 HOXA10P31260 410 aaPredicted RBP8.85□□□□□ -0.99
NDE1-202ENST00000396355 HIBADHP31937 336 aaKnown RBP8.85□□□□□ -0.99
NDE1-202ENST00000396355 PIK3CAP42336 1068 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 SPARCL1Q14515 664 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 ARHGEF6Q15052 776 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 DLGAP5Q15398 846 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 WDR45BQ5MNZ6 344 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 FAM117BQ6P1L5 589 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 FASTKD5Q7L8L6 764 aaKnown RBP8.85□□□□□ -0.99
NDE1-202ENST00000396355 DGCR14Q96DF8 476 aaKnown RBP8.85□□□□□ -0.99
NDE1-202ENST00000396355 GPATCH1Q9BRR8 931 aaKnown RBP8.85□□□□□ -0.99
NDE1-202ENST00000396355 OXCT2Q9BYC2 517 aaPredicted RBP8.85□□□□□ -0.99
NDE1-202ENST00000396355 TRIM55Q9BYV6 548 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 ARMCX1Q9P291 453 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 RNF14Q9UBS8 474 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 STRIP2Q9ULQ0 834 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 REXO2Q9Y3B8 237 aaKnown RBP8.85□□□□□ -0.99
NDE1-202ENST00000396355 NOC2LQ9Y3T9 749 aaKnown RBP8.85□□□□□ -0.99
NDE1-202ENST00000396355 PSMD11O00231 422 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 SEMA3EO15041 775 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 NCF2P19878 526 aaPredicted RBP8.85□□□□□ -0.99
NDE1-202ENST00000396355 INHBCP55103 352 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 SLC10A5Q5PT55 438 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 SULT1C3Q6IMI6 304 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 USP37Q86T82 979 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 CTAGE3PQ8IX95 158 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 FAM186BQ8IYM0 893 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 PPP2R3CQ969Q6 453 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 NSMCE3Q96MG7 304 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 TSNARE1Q96NA8 513 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 HEPHQ9BQS7 1158 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 THAP9Q9H5L6 903 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 ATP8A2Q9NTI2 1148 aa8.85□□□□□ -0.99
NDE1-202ENST00000396355 EXOC1LA0A1B0GW35 172 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 KLRC4O43908 158 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 CNOT3O75175 753 aaKnown RBP8.84□□□□□ -0.99
NDE1-202ENST00000396355 PSMG1O95456 288 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 BMP15O95972 392 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 RPN1P04843 607 aaKnown RBP8.84□□□□□ -0.99
NDE1-202ENST00000396355 MXI1P50539 228 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 CSE1LP55060 971 aaKnown RBP8.84□□□□□ -0.99
NDE1-202ENST00000396355 TFAP4Q01664 338 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 SBK1Q52WX2 424 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 GALNT6Q8NCL4 622 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 PNMA1Q8ND90 353 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 SH3RF3Q8TEJ3 882 aaPredicted RBP8.84□□□□□ -0.99
NDE1-202ENST00000396355 INPP5DQ92835 1189 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 ISCUQ9H1K1 167 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 SEMA4AQ9H3S1 761 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 KIAA1586Q9HCI6 787 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 NDUFA13Q9P0J0 144 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 HEY2Q9UBP5 337 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 RWDD2AQ9UIY3 292 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 SPO11Q9Y5K1 396 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 PDS5AQ29RF7 1337 aaKnown RBP8.84□□□□□ -0.99
NDE1-202ENST00000396355 A8MU76 341 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 GTPBP6O43824 516 aaPredicted RBP8.84□□□□□ -0.99
NDE1-202ENST00000396355 FYNP06241 537 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 SERPINB1P30740 379 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 ALDH18A1P54886 795 aaKnown RBP8.84□□□□□ -0.99
NDE1-202ENST00000396355 CERKLQ49MI3 558 aaPredicted RBP8.84□□□□□ -0.99
NDE1-202ENST00000396355 ZNF658Q5TYW1 1059 aaPredicted RBP8.84□□□□□ -0.99
NDE1-202ENST00000396355 TLK2Q86UE8 772 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 BLIDQ8IZY5 108 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 ERMNQ8TAM6 284 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 ASAP3Q8TDY4 903 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 ZIC5Q96T25 663 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 ANKRD2Q9GZV1 360 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 TUFT1Q9NNX1 390 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 DISC1Q9NRI5 854 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.84□□□□□ -0.99
NDE1-202ENST00000396355 SNED1Q8TER0 1413 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 LRRIQ4A6NIV6 560 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 A6NL46 340 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 ZC3H11AO75152 810 aaKnown RBP eCLIP8.84□□□□□ -0.99
NDE1-202ENST00000396355 ZWINTO95229 277 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 ITGA4P13612 1032 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 RPS12P25398 132 aaKnown RBP8.84□□□□□ -0.99
NDE1-202ENST00000396355 TRAPPC10P48553 1259 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 GPSM2P81274 684 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 PLIN5Q00G26 463 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 EXOC3L4Q17RC7 722 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 C12orf60Q5U649 245 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 SYDE2Q5VT97 1194 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 RSBN1Q5VWQ0 802 aaPredicted RBP8.84□□□□□ -0.99
NDE1-202ENST00000396355 RFWD3Q6PCD5 774 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 MOB2Q70IA6 237 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 NLRP9Q7RTR0 991 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 DEPDC4Q8N2C3 294 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 SMYD1Q8NB12 490 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 ANKRD36BP1Q96IX9 119 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 MAELQ96JY0 434 aaKnown RBP8.84□□□□□ -0.99
NDE1-202ENST00000396355 TOR3AQ9H497 397 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 MKL2Q9ULH7 1088 aa8.84□□□□□ -0.99
NDE1-202ENST00000396355 PHTF1Q9UMS5 762 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms