RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.91■□□□□ 0.3
CCHCR1-202ENST00000396263 CCHCR1Q8TD31 782 aa16.91■□□□□ 0.3
CCHCR1-202ENST00000396263 MGARPQ8TDB4 240 aa16.91■□□□□ 0.3
CCHCR1-202ENST00000396263 DCPSQ96C86 337 aaKnown RBP16.91■□□□□ 0.3
CCHCR1-202ENST00000396263 RBM41Q96IZ5 413 aaKnown RBP16.91■□□□□ 0.3
CCHCR1-202ENST00000396263 NIFKQ9BYG3 293 aaKnown RBP16.91■□□□□ 0.3
CCHCR1-202ENST00000396263 FBXO40Q9UH90 709 aa16.91■□□□□ 0.3
CCHCR1-202ENST00000396263 USTQ9Y2C2 406 aa16.91■□□□□ 0.3
CCHCR1-202ENST00000396263 USP15Q9Y4E8 981 aaPredicted RBP16.91■□□□□ 0.3
CCHCR1-202ENST00000396263 TCP11X1B4DZS4 312 aa16.91■□□□□ 0.3
CCHCR1-202ENST00000396263 BRAFP15056 766 aa16.91■□□□□ 0.3
CCHCR1-202ENST00000396263 EZRP15311 586 aaKnown RBP16.91■□□□□ 0.3
CCHCR1-202ENST00000396263 NCOA4Q13772 614 aa16.91■□□□□ 0.3
CCHCR1-202ENST00000396263 DPY19L2Q6NUT2 758 aa16.91■□□□□ 0.3
CCHCR1-202ENST00000396263 RCOR2Q8IZ40 523 aa16.91■□□□□ 0.3
CCHCR1-202ENST00000396263 RIBC1Q8N443 379 aaPredicted RBP16.91■□□□□ 0.3
CCHCR1-202ENST00000396263 ZNF606Q8WXB4 792 aa16.91■□□□□ 0.3
CCHCR1-202ENST00000396263 SLC7A3Q8WY07 619 aa16.91■□□□□ 0.3
CCHCR1-202ENST00000396263 FAM118BQ9BPY3 351 aa16.91■□□□□ 0.3
CCHCR1-202ENST00000396263 CCDC77Q9BR77 488 aa16.91■□□□□ 0.3
CCHCR1-202ENST00000396263 ANKFY1Q9P2R3 1169 aa16.91■□□□□ 0.3
CCHCR1-202ENST00000396263 A0A1B0GUA9 196 aa16.9■□□□□ 0.3
CCHCR1-202ENST00000396263 MGRN1O60291 552 aa16.9■□□□□ 0.3
CCHCR1-202ENST00000396263 EDN1P05305 212 aa16.9■□□□□ 0.3
CCHCR1-202ENST00000396263 SSTR3P32745 418 aaPredicted RBP16.9■□□□□ 0.3
CCHCR1-202ENST00000396263 BIRC2Q13490 618 aa16.9■□□□□ 0.3
CCHCR1-202ENST00000396263 MPP2Q14168 576 aa16.9■□□□□ 0.3
CCHCR1-202ENST00000396263 NAA25Q14CX7 972 aa16.9■□□□□ 0.3
CCHCR1-202ENST00000396263 ACCSLQ4AC99 568 aa16.9■□□□□ 0.3
CCHCR1-202ENST00000396263 CATSPERGQ6ZRH7 1159 aa16.9■□□□□ 0.3
CCHCR1-202ENST00000396263 SULF1Q8IWU6 871 aa16.9■□□□□ 0.3
CCHCR1-202ENST00000396263 CYP4X1Q8N118 509 aa16.9■□□□□ 0.3
CCHCR1-202ENST00000396263 MAGEC3Q8TD91 643 aa16.9■□□□□ 0.3
CCHCR1-202ENST00000396263 KCNK9Q9NPC2 374 aa16.9■□□□□ 0.3
CCHCR1-202ENST00000396263 NAALADL1Q9UQQ1 740 aa16.9■□□□□ 0.3
CCHCR1-202ENST00000396263 IGKV6D-21A0A0A0MT36 114 aa16.9■□□□□ 0.3
CCHCR1-202ENST00000396263 TMEM191CA6NGB0 347 aa16.9■□□□□ 0.3
CCHCR1-202ENST00000396263 LIASO43766 372 aa16.9■□□□□ 0.3
CCHCR1-202ENST00000396263 TMEM191BP0C7N4 346 aa16.9■□□□□ 0.3
CCHCR1-202ENST00000396263 CETPP11597 493 aa16.9■□□□□ 0.3
CCHCR1-202ENST00000396263 SSR1P43307 286 aaKnown RBP16.9■□□□□ 0.3
CCHCR1-202ENST00000396263 AP3M2P53677 418 aa16.9■□□□□ 0.3
CCHCR1-202ENST00000396263 MCL1Q07820 350 aa16.9■□□□□ 0.3
CCHCR1-202ENST00000396263 STXBP2Q15833 593 aa16.9■□□□□ 0.3
CCHCR1-202ENST00000396263 LRRC38Q5VT99 294 aa16.9■□□□□ 0.3
CCHCR1-202ENST00000396263 SLITRK1Q96PX8 696 aa16.9■□□□□ 0.3
CCHCR1-202ENST00000396263 FGFR1OP2Q9NVK5 253 aa16.9■□□□□ 0.3
CCHCR1-202ENST00000396263 PTPRFP10586 1907 aa16.9■□□□□ 0.3
CCHCR1-202ENST00000396263 KIF3CO14782 793 aa16.89■□□□□ 0.29
CCHCR1-202ENST00000396263 GJB6O95452 261 aa16.89■□□□□ 0.29
CCHCR1-202ENST00000396263 CALB1P05937 261 aa16.89■□□□□ 0.29
CCHCR1-202ENST00000396263 EPHX2P34913 555 aa16.89■□□□□ 0.29
CCHCR1-202ENST00000396263 GJC1P36383 396 aa16.89■□□□□ 0.29
CCHCR1-202ENST00000396263 RFC5P40937 340 aa16.89■□□□□ 0.29
CCHCR1-202ENST00000396263 RPL7AP62424 266 aaKnown RBP16.89■□□□□ 0.29
CCHCR1-202ENST00000396263 MKRN3Q13064 507 aaKnown RBP16.89■□□□□ 0.29
CCHCR1-202ENST00000396263 P3H1Q32P28 736 aa16.89■□□□□ 0.29
CCHCR1-202ENST00000396263 NOL9Q5SY16 702 aaKnown RBP16.89■□□□□ 0.29
CCHCR1-202ENST00000396263 ARHGEF18Q6ZSZ5 1173 aa16.89■□□□□ 0.29
CCHCR1-202ENST00000396263 GSTA5Q7RTV2 222 aa16.89■□□□□ 0.29
CCHCR1-202ENST00000396263 IMPG2Q9BZV3 1241 aa16.89■□□□□ 0.29
CCHCR1-202ENST00000396263 ABCF3Q9NUQ8 709 aa16.89■□□□□ 0.29
CCHCR1-202ENST00000396263 TCRBV5S1A1TA0A578 114 aa16.89■□□□□ 0.29
CCHCR1-202ENST00000396263 SUN1O94901 812 aa16.89■□□□□ 0.29
CCHCR1-202ENST00000396263 LSM8O95777 96 aaKnown RBP16.89■□□□□ 0.29
CCHCR1-202ENST00000396263 ASS1P00966 412 aaKnown RBP16.89■□□□□ 0.29
CCHCR1-202ENST00000396263 MAGEA4P43358 317 aa16.89■□□□□ 0.29
CCHCR1-202ENST00000396263 COPS2P61201 443 aa16.89■□□□□ 0.29
CCHCR1-202ENST00000396263 GRM1Q13255 1194 aa16.89■□□□□ 0.29
CCHCR1-202ENST00000396263 NUGGCQ68CJ6 796 aa16.89■□□□□ 0.29
CCHCR1-202ENST00000396263 BRSK2Q8IWQ3 736 aa16.89■□□□□ 0.29
CCHCR1-202ENST00000396263 ANKRD42Q8N9B4 389 aa16.89■□□□□ 0.29
CCHCR1-202ENST00000396263 DNERQ8NFT8 737 aa16.89■□□□□ 0.29
CCHCR1-202ENST00000396263 C9orf72Q96LT7 481 aa16.89■□□□□ 0.29
CCHCR1-202ENST00000396263 RBM15Q96T37 977 aaKnown RBP eCLIP16.89■□□□□ 0.298e-6■■■■□ 19.3
CCHCR1-202ENST00000396263 SCN4AP35499 1836 aa16.88■□□□□ 0.29
CCHCR1-202ENST00000396263 DNALI1O14645 258 aaPredicted RBP16.88■□□□□ 0.29
CCHCR1-202ENST00000396263 ADCY3O60266 1144 aa16.88■□□□□ 0.29
CCHCR1-202ENST00000396263 TJP3O95049 919 aa16.88■□□□□ 0.29
CCHCR1-202ENST00000396263 PTPN7P35236 360 aa16.88■□□□□ 0.29
CCHCR1-202ENST00000396263 ELF3P78545 371 aaPredicted RBP16.88■□□□□ 0.29
CCHCR1-202ENST00000396263 SF3A3Q12874 501 aaKnown RBP eCLIP16.88■□□□□ 0.292e-6■■□□□ 13.6
CCHCR1-202ENST00000396263 TARBP2Q15633 366 aaKnown RBP16.88■□□□□ 0.29
CCHCR1-202ENST00000396263 EAPPQ56P03 285 aaPredicted RBP16.88■□□□□ 0.29
CCHCR1-202ENST00000396263 ZPBP2Q6X784 338 aa16.88■□□□□ 0.29
CCHCR1-202ENST00000396263 PLCD4Q9BRC7 762 aa16.88■□□□□ 0.29
CCHCR1-202ENST00000396263 DNPEPQ9ULA0 475 aa16.88■□□□□ 0.29
CCHCR1-202ENST00000396263 SNCAIPQ9Y6H5 919 aa16.88■□□□□ 0.29
CCHCR1-202ENST00000396263 CFAP73A6NFT4 308 aa16.88■□□□□ 0.29
CCHCR1-202ENST00000396263 GLTPD2A6NH11 291 aa16.88■□□□□ 0.29
CCHCR1-202ENST00000396263 FOXO6A8MYZ6 492 aa16.88■□□□□ 0.29
CCHCR1-202ENST00000396263 GH1P01241 217 aa16.88■□□□□ 0.29
CCHCR1-202ENST00000396263 IRX1P78414 480 aaPredicted RBP16.88■□□□□ 0.29
CCHCR1-202ENST00000396263 ZNF252P-AS1Q0IIN9 211 aa16.88■□□□□ 0.29
CCHCR1-202ENST00000396263 GRIK3Q13003 919 aa16.88■□□□□ 0.29
CCHCR1-202ENST00000396263 CAPSQ13938 189 aa16.88■□□□□ 0.29
CCHCR1-202ENST00000396263 VGLL4Q14135 290 aa16.88■□□□□ 0.29
CCHCR1-202ENST00000396263 ATP13A4Q4VNC1 1196 aa16.88■□□□□ 0.29
CCHCR1-202ENST00000396263 TMEM63BQ5T3F8 832 aa16.88■□□□□ 0.29
CCHCR1-202ENST00000396263 PPP1R21Q6ZMI0 780 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms