RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 A8MXQ7 604 aa14.58□□□□□ -0.08
VAPB-202ENST00000395802 THAP12O43422 761 aa14.58□□□□□ -0.08
VAPB-202ENST00000395802 KRT86O43790 486 aa14.58□□□□□ -0.08
VAPB-202ENST00000395802 UPP2O95045 317 aa14.58□□□□□ -0.08
VAPB-202ENST00000395802 TUBB4AP04350 444 aa14.58□□□□□ -0.08
VAPB-202ENST00000395802 MAGEA1P43355 309 aa14.58□□□□□ -0.08
VAPB-202ENST00000395802 OR1G1P47890 313 aa14.58□□□□□ -0.08
VAPB-202ENST00000395802 CDH8P55286 799 aa14.58□□□□□ -0.08
VAPB-202ENST00000395802 WDR5P61964 334 aaKnown RBP14.58□□□□□ -0.08
VAPB-202ENST00000395802 KIF5AQ12840 1032 aa14.58□□□□□ -0.08
VAPB-202ENST00000395802 ELAVL2Q12926 359 aaKnown RBP14.58□□□□□ -0.08
VAPB-202ENST00000395802 TCTN1Q2MV58 587 aa14.58□□□□□ -0.08
VAPB-202ENST00000395802 ARHGAP29Q52LW3 1261 aa14.58□□□□□ -0.08
VAPB-202ENST00000395802 DNTTIP2Q5QJE6 756 aaKnown RBP14.58□□□□□ -0.08
VAPB-202ENST00000395802 ZNF662Q6ZS27 426 aa14.58□□□□□ -0.08
VAPB-202ENST00000395802 LIMS2Q7Z4I7 341 aa14.58□□□□□ -0.08
VAPB-202ENST00000395802 NOP9Q86U38 636 aaKnown RBP14.58□□□□□ -0.08
VAPB-202ENST00000395802 DPF3Q92784 378 aa14.58□□□□□ -0.08
VAPB-202ENST00000395802 SENP8Q96LD8 212 aa14.58□□□□□ -0.08
VAPB-202ENST00000395802 NAGPAQ9UK23 515 aa14.58□□□□□ -0.08
VAPB-202ENST00000395802 INTUQ9ULD6 942 aa14.58□□□□□ -0.08
VAPB-202ENST00000395802 PCDHA13Q9Y5I0 950 aa14.58□□□□□ -0.08
VAPB-202ENST00000395802 A0A087X0T9 212 aa14.57□□□□□ -0.08
VAPB-202ENST00000395802 SPTLC1O15269 473 aa14.57□□□□□ -0.08
VAPB-202ENST00000395802 TADA2AO75478 443 aa14.57□□□□□ -0.08
VAPB-202ENST00000395802 CAPN15O75808 1086 aa14.57□□□□□ -0.08
VAPB-202ENST00000395802 FAM228BP0C875 321 aa14.57□□□□□ -0.08
VAPB-202ENST00000395802 VDRP11473 427 aa14.57□□□□□ -0.08
VAPB-202ENST00000395802 WARSP23381 471 aaKnown RBP14.57□□□□□ -0.08
VAPB-202ENST00000395802 RAP1GAPP47736 663 aa14.57□□□□□ -0.08
VAPB-202ENST00000395802 ALDH7A1P49419 539 aaKnown RBP14.57□□□□□ -0.08
VAPB-202ENST00000395802 NDST1P52848 882 aa14.57□□□□□ -0.08
VAPB-202ENST00000395802 PTPN14Q15678 1187 aa14.57□□□□□ -0.08
VAPB-202ENST00000395802 ZNF394Q53GI3 561 aa14.57□□□□□ -0.08
VAPB-202ENST00000395802 CCDC122Q5T0U0 273 aa14.57□□□□□ -0.08
VAPB-202ENST00000395802 ZNF280BQ86YH2 543 aa14.57□□□□□ -0.08
VAPB-202ENST00000395802 GLYCTKQ8IVS8 523 aa14.57□□□□□ -0.08
VAPB-202ENST00000395802 SLC30A5Q8TAD4 765 aa14.57□□□□□ -0.08
VAPB-202ENST00000395802 ZNF606Q8WXB4 792 aa14.57□□□□□ -0.08
VAPB-202ENST00000395802 VWCEQ96DN2 955 aa14.57□□□□□ -0.08
VAPB-202ENST00000395802 HEXIM2Q96MH2 286 aaKnown RBP14.57□□□□□ -0.08
VAPB-202ENST00000395802 SYT11Q9BT88 431 aa14.57□□□□□ -0.08
VAPB-202ENST00000395802 ZNF518BQ9C0D4 1074 aa14.57□□□□□ -0.08
VAPB-202ENST00000395802 FAN1Q9Y2M0 1017 aa14.57□□□□□ -0.08
VAPB-202ENST00000395802 NR2E3Q9Y5X4 410 aa14.57□□□□□ -0.08
VAPB-202ENST00000395802 SCN1AP35498 2009 aa14.57□□□□□ -0.08
VAPB-202ENST00000395802 ZBBXA8MT70 800 aa14.57□□□□□ -0.08
VAPB-202ENST00000395802 M0QZQ0 153 aa14.57□□□□□ -0.08
VAPB-202ENST00000395802 DDHD2O94830 711 aa14.57□□□□□ -0.08
VAPB-202ENST00000395802 LSM8O95777 96 aaKnown RBP14.57□□□□□ -0.08
VAPB-202ENST00000395802 ACRP10323 421 aa14.57□□□□□ -0.08
VAPB-202ENST00000395802 TNNT1P13805 278 aa14.57□□□□□ -0.08
VAPB-202ENST00000395802 CD19P15391 556 aa14.57□□□□□ -0.08
VAPB-202ENST00000395802 VAV2P52735 878 aa14.57□□□□□ -0.08
VAPB-202ENST00000395802 RAD23BP54727 409 aa14.57□□□□□ -0.08
VAPB-202ENST00000395802 SGO2Q562F6 1265 aa14.57□□□□□ -0.08
VAPB-202ENST00000395802 OTOP2Q7RTS6 562 aa14.57□□□□□ -0.08
VAPB-202ENST00000395802 GPIHBP1Q8IV16 184 aa14.57□□□□□ -0.08
VAPB-202ENST00000395802 PDCL2Q8N4E4 241 aa14.57□□□□□ -0.08
VAPB-202ENST00000395802 SUSD3Q96L08 255 aa14.57□□□□□ -0.08
VAPB-202ENST00000395802 L1RE1Q9UN81 338 aa14.57□□□□□ -0.08
VAPB-202ENST00000395802 STXBP5LQ9Y2K9 1186 aa14.57□□□□□ -0.08
VAPB-202ENST00000395802 LTBP2Q14767 1821 aa14.56□□□□□ -0.08
VAPB-202ENST00000395802 CCDC85CA6NKD9 419 aa14.56□□□□□ -0.08
VAPB-202ENST00000395802 DDX3XO00571 662 aaKnown RBP eCLIP14.56□□□□□ -0.087e-11■□□□□ 10.9
VAPB-202ENST00000395802 TYMPP19971 482 aa14.56□□□□□ -0.08
VAPB-202ENST00000395802 PCSK1P29120 753 aa14.56□□□□□ -0.08
VAPB-202ENST00000395802 CYP27A1Q02318 531 aa14.56□□□□□ -0.08
VAPB-202ENST00000395802 TAF3Q5VWG9 929 aa14.56□□□□□ -0.08
VAPB-202ENST00000395802 CMTR2Q8IYT2 770 aaKnown RBP14.56□□□□□ -0.08
VAPB-202ENST00000395802 THEM5Q8N1Q8 247 aa14.56□□□□□ -0.08
VAPB-202ENST00000395802 ACRBPQ8NEB7 543 aa14.56□□□□□ -0.08
VAPB-202ENST00000395802 PHOSPHO2Q8TCD6 241 aa14.56□□□□□ -0.08
VAPB-202ENST00000395802 DDX1Q92499 740 aaKnown RBP14.56□□□□□ -0.08
VAPB-202ENST00000395802 TRIM11Q96F44 468 aa14.56□□□□□ -0.08
VAPB-202ENST00000395802 CALR3Q96L12 384 aaKnown RBP14.56□□□□□ -0.08
VAPB-202ENST00000395802 MRPL45Q9BRJ2 306 aaKnown RBP14.56□□□□□ -0.08
VAPB-202ENST00000395802 PAAF1Q9BRP4 392 aa14.56□□□□□ -0.08
VAPB-202ENST00000395802 SDCBP2Q9H190 292 aa14.56□□□□□ -0.08
VAPB-202ENST00000395802 NRDE2Q9H7Z3 1164 aa14.56□□□□□ -0.08
VAPB-202ENST00000395802 STK39Q9UEW8 545 aa14.56□□□□□ -0.08
VAPB-202ENST00000395802 PCDHGC3Q9UN70 934 aa14.56□□□□□ -0.08
VAPB-202ENST00000395802 KIF2AO00139 706 aaPredicted RBP14.55□□□□□ -0.08
VAPB-202ENST00000395802 GABRDO14764 452 aa14.55□□□□□ -0.08
VAPB-202ENST00000395802 SYN3O14994 580 aa14.55□□□□□ -0.08
VAPB-202ENST00000395802 RTN2O75298 545 aa14.55□□□□□ -0.08
VAPB-202ENST00000395802 CYP11A1P05108 521 aa14.55□□□□□ -0.08
VAPB-202ENST00000395802 MMEP08473 750 aa14.55□□□□□ -0.08
VAPB-202ENST00000395802 H2AFZP0C0S5 128 aa14.55□□□□□ -0.08
VAPB-202ENST00000395802 NSFP46459 744 aaKnown RBP14.55□□□□□ -0.08
VAPB-202ENST00000395802 FMO1Q01740 532 aa14.55□□□□□ -0.08
VAPB-202ENST00000395802 TIGD5Q53EQ6 642 aa14.55□□□□□ -0.08
VAPB-202ENST00000395802 ZNF365Q70YC5 407 aa14.55□□□□□ -0.08
VAPB-202ENST00000395802 H2AFVQ71UI9 128 aa14.55□□□□□ -0.08
VAPB-202ENST00000395802 CRYBG2Q8N1P7 616 aa14.55□□□□□ -0.08
VAPB-202ENST00000395802 TMEM130Q8N3G9 435 aa14.55□□□□□ -0.08
VAPB-202ENST00000395802 SLC4A11Q8NBS3 891 aa14.55□□□□□ -0.08
VAPB-202ENST00000395802 TMEM35BQ8NCS4 154 aa14.55□□□□□ -0.08
VAPB-202ENST00000395802 MSANTD4Q8NCY6 345 aa14.55□□□□□ -0.08
VAPB-202ENST00000395802 C3orf58Q8NDZ4 430 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms