RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 FAM170BA6NMN3 283 aa19.48■□□□□ 0.71
CXCL12-204ENST00000395793 PRPF6O94906 941 aaKnown RBP19.48■□□□□ 0.71
CXCL12-204ENST00000395793 IL18RAPO95256 599 aa19.48■□□□□ 0.71
CXCL12-204ENST00000395793 ATF6P18850 670 aa19.48■□□□□ 0.71
CXCL12-204ENST00000395793 PAX3P23760 479 aa19.48■□□□□ 0.71
CXCL12-204ENST00000395793 PLD1Q13393 1074 aa19.48■□□□□ 0.71
CXCL12-204ENST00000395793 FZD5Q13467 585 aa19.48■□□□□ 0.71
CXCL12-204ENST00000395793 WSCD1Q658N2 575 aa19.48■□□□□ 0.71
CXCL12-204ENST00000395793 GAREM2Q75VX8 874 aa19.48■□□□□ 0.71
CXCL12-204ENST00000395793 LRRTM3Q86VH5 581 aa19.48■□□□□ 0.71
CXCL12-204ENST00000395793 CXorf38Q8TB03 319 aa19.48■□□□□ 0.71
CXCL12-204ENST00000395793 HPS3Q969F9 1004 aa19.48■□□□□ 0.71
CXCL12-204ENST00000395793 LPIN3Q9BQK8 851 aa19.48■□□□□ 0.71
CXCL12-204ENST00000395793 OSBPL6Q9BZF3 934 aa19.48■□□□□ 0.71
CXCL12-204ENST00000395793 BRD9Q9H8M2 597 aa19.48■□□□□ 0.71
CXCL12-204ENST00000395793 TRPV4Q9HBA0 871 aa19.48■□□□□ 0.71
CXCL12-204ENST00000395793 KIF26AQ9ULI4 1882 aaPredicted RBP19.48■□□□□ 0.71
CXCL12-204ENST00000395793 SPTLC2O15270 562 aa19.47■□□□□ 0.71
CXCL12-204ENST00000395793 ALDH1A3P47895 512 aa19.47■□□□□ 0.71
CXCL12-204ENST00000395793 EPHB3P54753 998 aa19.47■□□□□ 0.71
CXCL12-204ENST00000395793 SLC39A12Q504Y0 691 aa19.47■□□□□ 0.71
CXCL12-204ENST00000395793 FOXD4L5Q5VV16 416 aaPredicted RBP19.47■□□□□ 0.71
CXCL12-204ENST00000395793 ARMCX5Q6P1M9 558 aa19.47■□□□□ 0.71
CXCL12-204ENST00000395793 DNAJB7Q7Z6W7 309 aaPredicted RBP19.47■□□□□ 0.71
CXCL12-204ENST00000395793 ZNF687Q8N1G0 1237 aa19.47■□□□□ 0.71
CXCL12-204ENST00000395793 C1orf127Q8N9H9 656 aa19.47■□□□□ 0.71
CXCL12-204ENST00000395793 FOXD4L4Q8WXT5 416 aaPredicted RBP19.47■□□□□ 0.71
CXCL12-204ENST00000395793 SNX21Q969T3 373 aa19.47■□□□□ 0.71
CXCL12-204ENST00000395793 PSMG2Q969U7 264 aa19.47■□□□□ 0.71
CXCL12-204ENST00000395793 TRMT61BQ9BVS5 477 aaKnown RBP19.47■□□□□ 0.71
CXCL12-204ENST00000395793 PCIF1Q9H4Z3 704 aa19.47■□□□□ 0.71
CXCL12-204ENST00000395793 PCDHB13Q9Y5F0 798 aa19.47■□□□□ 0.71
CXCL12-204ENST00000395793 PSMC3P17980 439 aa19.46■□□□□ 0.71
CXCL12-204ENST00000395793 GARTP22102 1010 aa19.46■□□□□ 0.71
CXCL12-204ENST00000395793 POLR2BP30876 1174 aaKnown RBP19.46■□□□□ 0.71
CXCL12-204ENST00000395793 GDI1P31150 447 aa19.46■□□□□ 0.71
CXCL12-204ENST00000395793 TFAMQ00059 246 aaKnown RBP19.46■□□□□ 0.71
CXCL12-204ENST00000395793 ALCAMQ13740 583 aa19.46■□□□□ 0.71
CXCL12-204ENST00000395793 SHC4Q6S5L8 630 aa19.46■□□□□ 0.71
CXCL12-204ENST00000395793 NT5DC4Q86YG4 428 aa19.46■□□□□ 0.71
CXCL12-204ENST00000395793 GPIHBP1Q8IV16 184 aa19.46■□□□□ 0.71
CXCL12-204ENST00000395793 SYCP3Q8IZU3 236 aa19.46■□□□□ 0.71
CXCL12-204ENST00000395793 CLDN23Q96B33 292 aa19.46■□□□□ 0.71
CXCL12-204ENST00000395793 KBTBD4Q9NVX7 518 aa19.46■□□□□ 0.71
CXCL12-204ENST00000395793 RBAKQ9NYW8 714 aaPredicted RBP19.46■□□□□ 0.71
CXCL12-204ENST00000395793 HSFX1Q9UBD0 423 aa19.46■□□□□ 0.71
CXCL12-204ENST00000395793 DSEQ9UL01 958 aa19.46■□□□□ 0.71
CXCL12-204ENST00000395793 SPTBN4Q9H254 2564 aa19.45■□□□□ 0.7
CXCL12-204ENST00000395793 HEPACAM2A8MVW5 462 aa19.45■□□□□ 0.7
CXCL12-204ENST00000395793 KPNA7A9QM74 516 aa19.45■□□□□ 0.7
CXCL12-204ENST00000395793 ARNTLO00327 626 aa19.45■□□□□ 0.7
CXCL12-204ENST00000395793 PPP6R2O75170 966 aa19.45■□□□□ 0.7
CXCL12-204ENST00000395793 ITGB3P05106 788 aa19.45■□□□□ 0.7
CXCL12-204ENST00000395793 HOXD13P35453 343 aa19.45■□□□□ 0.7
CXCL12-204ENST00000395793 SV2CQ496J9 727 aa19.45■□□□□ 0.7
CXCL12-204ENST00000395793 ADSSL1Q8N142 457 aa19.45■□□□□ 0.7
CXCL12-204ENST00000395793 LRRC3BQ96PB8 259 aa19.45■□□□□ 0.7
CXCL12-204ENST00000395793 SEPT5Q99719 369 aaPredicted RBP19.45■□□□□ 0.7
CXCL12-204ENST00000395793 BCO2Q9BYV7 579 aa19.45■□□□□ 0.7
CXCL12-204ENST00000395793 TRIM9Q9C026 710 aa19.45■□□□□ 0.7
CXCL12-204ENST00000395793 TNMDQ9H2S6 317 aa19.45■□□□□ 0.7
CXCL12-204ENST00000395793 SLITRK6Q9H5Y7 841 aa19.45■□□□□ 0.7
CXCL12-204ENST00000395793 IL21Q9HBE4 155 aa19.45■□□□□ 0.7
CXCL12-204ENST00000395793 PDE11AQ9HCR9 933 aa19.45■□□□□ 0.7
CXCL12-204ENST00000395793 TMLHEQ9NVH6 421 aa19.45■□□□□ 0.7
CXCL12-204ENST00000395793 L1RE1Q9UN81 338 aa19.45■□□□□ 0.7
CXCL12-204ENST00000395793 ASB3Q9Y575 518 aa19.45■□□□□ 0.7
CXCL12-204ENST00000395793 EP300Q09472 2414 aaPredicted RBP19.45■□□□□ 0.7
CXCL12-204ENST00000395793 PTPRJQ12913 1337 aa19.45■□□□□ 0.7
CXCL12-204ENST00000395793 OTOGLQ3ZCN5 2332 aa19.44■□□□□ 0.7
CXCL12-204ENST00000395793 EXTL3O43909 919 aa19.44■□□□□ 0.7
CXCL12-204ENST00000395793 LDHAP00338 332 aaKnown RBP19.44■□□□□ 0.7
CXCL12-204ENST00000395793 GABRR2P28476 465 aa19.44■□□□□ 0.7
CXCL12-204ENST00000395793 CCDC142Q17RM4 750 aa19.44■□□□□ 0.7
CXCL12-204ENST00000395793 LMBRD2Q68DH5 695 aaPredicted RBP19.44■□□□□ 0.7
CXCL12-204ENST00000395793 METTL23Q86XA0 190 aa19.44■□□□□ 0.7
CXCL12-204ENST00000395793 MFSD6LQ8IWD5 586 aa19.44■□□□□ 0.7
CXCL12-204ENST00000395793 CCDC65Q8IXS2 484 aa19.44■□□□□ 0.7
CXCL12-204ENST00000395793 STKLD1Q8NE28 680 aa19.44■□□□□ 0.7
CXCL12-204ENST00000395793 DEPDC1BQ8WUY9 529 aa19.44■□□□□ 0.7
CXCL12-204ENST00000395793 DHX58Q96C10 678 aa19.44■□□□□ 0.7
CXCL12-204ENST00000395793 ZNF560Q96MR9 790 aa19.44■□□□□ 0.7
CXCL12-204ENST00000395793 SPATA6Q9NWH7 488 aaPredicted RBP19.44■□□□□ 0.7
CXCL12-204ENST00000395793 SIX4Q9UIU6 781 aa19.44■□□□□ 0.7
CXCL12-204ENST00000395793 AGAP1Q9UPQ3 857 aa19.44■□□□□ 0.7
CXCL12-204ENST00000395793 TULP1O00294 542 aaPredicted RBP19.43■□□□□ 0.7
CXCL12-204ENST00000395793 YEATS4O95619 227 aa19.43■□□□□ 0.7
CXCL12-204ENST00000395793 HAPLN1P10915 354 aaPredicted RBP19.43■□□□□ 0.7
CXCL12-204ENST00000395793 CYP4F8P98187 520 aa19.43■□□□□ 0.7
CXCL12-204ENST00000395793 FOXD4L6Q3SYB3 417 aaPredicted RBP19.43■□□□□ 0.7
CXCL12-204ENST00000395793 MGAT5BQ3V5L5 792 aa19.43■□□□□ 0.7
CXCL12-204ENST00000395793 FOXD4L3Q6VB84 417 aaPredicted RBP19.43■□□□□ 0.7
CXCL12-204ENST00000395793 ZNF852Q6ZMS4 543 aa19.43■□□□□ 0.7
CXCL12-204ENST00000395793 OSTM1Q86WC4 334 aa19.43■□□□□ 0.7
CXCL12-204ENST00000395793 ARID3BQ8IVW6 561 aaPredicted RBP19.43■□□□□ 0.7
CXCL12-204ENST00000395793 THEM5Q8N1Q8 247 aa19.43■□□□□ 0.7
CXCL12-204ENST00000395793 GPD1LQ8N335 351 aa19.43■□□□□ 0.7
CXCL12-204ENST00000395793 PDCL2Q8N4E4 241 aa19.43■□□□□ 0.7
CXCL12-204ENST00000395793 GIPC2Q8TF65 315 aa19.43■□□□□ 0.7
CXCL12-204ENST00000395793 NOC3LQ8WTT2 800 aaKnown RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms