RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 TAS1R2Q8TE23 839 aa17.77■□□□□ 0.44
CXCL1-201ENST00000395761 HDAC7Q8WUI4 952 aa17.77■□□□□ 0.44
CXCL1-201ENST00000395761 ADAM7Q9H2U9 754 aa17.77■□□□□ 0.44
CXCL1-201ENST00000395761 SFXN1Q9H9B4 322 aa17.77■□□□□ 0.44
CXCL1-201ENST00000395761 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.77■□□□□ 0.44
CXCL1-201ENST00000395761 NXF1Q9UBU9 619 aaKnown RBP17.77■□□□□ 0.44
CXCL1-201ENST00000395761 ARMCX3Q9UH62 379 aaPredicted RBP17.77■□□□□ 0.44
CXCL1-201ENST00000395761 POLIQ9UNA4 740 aa17.77■□□□□ 0.44
CXCL1-201ENST00000395761 SYCE3A1L190 88 aa17.76■□□□□ 0.43
CXCL1-201ENST00000395761 HCRTO43612 131 aa17.76■□□□□ 0.43
CXCL1-201ENST00000395761 SEC24AO95486 1093 aa17.76■□□□□ 0.43
CXCL1-201ENST00000395761 VNN2O95498 520 aa17.76■□□□□ 0.43
CXCL1-201ENST00000395761 STAU1O95793 577 aaKnown RBP17.76■□□□□ 0.43
CXCL1-201ENST00000395761 CPB1P15086 417 aa17.76■□□□□ 0.43
CXCL1-201ENST00000395761 GTF2H1P32780 548 aa17.76■□□□□ 0.43
CXCL1-201ENST00000395761 ZNF699Q32M78 642 aa17.76■□□□□ 0.43
CXCL1-201ENST00000395761 CCDC40Q4G0X9 1142 aa17.76■□□□□ 0.43
CXCL1-201ENST00000395761 DCAF17Q5H9S7 520 aaPredicted RBP17.76■□□□□ 0.43
CXCL1-201ENST00000395761 CT47A1Q5JQC4 288 aaPredicted RBP17.76■□□□□ 0.43
CXCL1-201ENST00000395761 TCERG1LQ5VWI1 586 aa17.76■□□□□ 0.43
CXCL1-201ENST00000395761 RNF19BQ6ZMZ0 732 aa17.76■□□□□ 0.43
CXCL1-201ENST00000395761 FRMD5Q7Z6J6 570 aa17.76■□□□□ 0.43
CXCL1-201ENST00000395761 LRRTM3Q86VH5 581 aa17.76■□□□□ 0.43
CXCL1-201ENST00000395761 ADGRF2Q8IZF7 708 aa17.76■□□□□ 0.43
CXCL1-201ENST00000395761 THEM5Q8N1Q8 247 aa17.76■□□□□ 0.43
CXCL1-201ENST00000395761 TMEM86AQ8N2M4 240 aa17.76■□□□□ 0.43
CXCL1-201ENST00000395761 SUSD6Q92537 303 aa17.76■□□□□ 0.43
CXCL1-201ENST00000395761 SLC35C1Q96A29 364 aa17.76■□□□□ 0.43
CXCL1-201ENST00000395761 MMS19Q96T76 1030 aa17.76■□□□□ 0.43
CXCL1-201ENST00000395761 PI4K2AQ9BTU6 479 aa17.76■□□□□ 0.43
CXCL1-201ENST00000395761 OXCT2Q9BYC2 517 aaPredicted RBP17.76■□□□□ 0.43
CXCL1-201ENST00000395761 TMEM8AQ9HCN3 771 aa17.76■□□□□ 0.43
CXCL1-201ENST00000395761 DPP7Q9UHL4 492 aa17.76■□□□□ 0.43
CXCL1-201ENST00000395761 TSC2P49815 1807 aa17.76■□□□□ 0.43
CXCL1-201ENST00000395761 CCDC195A0A1B0GUA6 201 aa17.75■□□□□ 0.43
CXCL1-201ENST00000395761 GABRDO14764 452 aa17.75■□□□□ 0.43
CXCL1-201ENST00000395761 ZMYND10O75800 440 aa17.75■□□□□ 0.43
CXCL1-201ENST00000395761 C8AP07357 584 aa17.75■□□□□ 0.43
CXCL1-201ENST00000395761 CCDC192P0DO97 292 aa17.75■□□□□ 0.43
CXCL1-201ENST00000395761 ATF2P15336 505 aa17.75■□□□□ 0.43
CXCL1-201ENST00000395761 PIK3CAP42336 1068 aa17.75■□□□□ 0.43
CXCL1-201ENST00000395761 ZNF445P59923 1031 aa17.75■□□□□ 0.43
CXCL1-201ENST00000395761 ITIH3Q06033 890 aa17.75■□□□□ 0.43
CXCL1-201ENST00000395761 GPR17Q13304 367 aa17.75■□□□□ 0.43
CXCL1-201ENST00000395761 SMAD2Q15796 467 aaKnown RBP17.75■□□□□ 0.43
CXCL1-201ENST00000395761 SGSM1Q2NKQ1 1148 aa17.75■□□□□ 0.43
CXCL1-201ENST00000395761 TPGS2Q68CL5 300 aa17.75■□□□□ 0.43
CXCL1-201ENST00000395761 KRT39Q6A163 491 aa17.75■□□□□ 0.43
CXCL1-201ENST00000395761 SPOPLQ6IQ16 392 aa17.75■□□□□ 0.43
CXCL1-201ENST00000395761 DPH6Q7L8W6 267 aa17.75■□□□□ 0.43
CXCL1-201ENST00000395761 CMASQ8NFW8 434 aaPredicted RBP17.75■□□□□ 0.43
CXCL1-201ENST00000395761 SLC7A14Q8TBB6 771 aa17.75■□□□□ 0.43
CXCL1-201ENST00000395761 KBTBD7Q8WVZ9 684 aa17.75■□□□□ 0.43
CXCL1-201ENST00000395761 SEMA4DQ92854 862 aa17.75■□□□□ 0.43
CXCL1-201ENST00000395761 ZNF707Q96C28 371 aaPredicted RBP17.75■□□□□ 0.43
CXCL1-201ENST00000395761 PGLYRP2Q96PD5 576 aa17.75■□□□□ 0.43
CXCL1-201ENST00000395761 MRPL45Q9BRJ2 306 aaKnown RBP17.75■□□□□ 0.43
CXCL1-201ENST00000395761 ZCWPW1Q9H0M4 648 aa17.75■□□□□ 0.43
CXCL1-201ENST00000395761 VRTNQ9H8Y1 702 aa17.75■□□□□ 0.43
CXCL1-201ENST00000395761 METTL14Q9HCE5 456 aaKnown RBP17.75■□□□□ 0.43
CXCL1-201ENST00000395761 ANO10Q9NW15 660 aa17.75■□□□□ 0.43
CXCL1-201ENST00000395761 DDX43Q9NXZ2 648 aaKnown RBP17.75■□□□□ 0.43
CXCL1-201ENST00000395761 CLSTN1O94985 981 aa17.74■□□□□ 0.43
CXCL1-201ENST00000395761 ACAT1P24752 427 aaKnown RBP17.74■□□□□ 0.43
CXCL1-201ENST00000395761 LMO2P25791 158 aa17.74■□□□□ 0.43
CXCL1-201ENST00000395761 TNNC1P63316 161 aa17.74■□□□□ 0.43
CXCL1-201ENST00000395761 TYRO3Q06418 890 aa17.74■□□□□ 0.43
CXCL1-201ENST00000395761 ADCY1Q08828 1119 aa17.74■□□□□ 0.43
CXCL1-201ENST00000395761 CBWD6Q4V339 395 aa17.74■□□□□ 0.43
CXCL1-201ENST00000395761 SLC39A12Q504Y0 691 aa17.74■□□□□ 0.43
CXCL1-201ENST00000395761 ZNF667Q5HYK9 610 aa17.74■□□□□ 0.43
CXCL1-201ENST00000395761 CBWD3Q5JTY5 395 aa17.74■□□□□ 0.43
CXCL1-201ENST00000395761 CBWD5Q5RIA9 395 aa17.74■□□□□ 0.43
CXCL1-201ENST00000395761 LIN9Q5TKA1 542 aa17.74■□□□□ 0.43
CXCL1-201ENST00000395761 CES5AQ6NT32 575 aa17.74■□□□□ 0.43
CXCL1-201ENST00000395761 ELMSAN1Q6PJG2 1045 aa17.74■□□□□ 0.43
CXCL1-201ENST00000395761 GPR149Q86SP6 731 aa17.74■□□□□ 0.43
CXCL1-201ENST00000395761 TCEAL8Q8IYN2 117 aa17.74■□□□□ 0.43
CXCL1-201ENST00000395761 ATAD1Q8NBU5 361 aa17.74■□□□□ 0.43
CXCL1-201ENST00000395761 NECAB3Q96P71 396 aaPredicted RBP17.74■□□□□ 0.43
CXCL1-201ENST00000395761 CRISPLD1Q9H336 500 aa17.74■□□□□ 0.43
CXCL1-201ENST00000395761 CYP4F11Q9HBI6 524 aa17.74■□□□□ 0.43
CXCL1-201ENST00000395761 AFF4Q9UHB7 1163 aaKnown RBP17.74■□□□□ 0.43
CXCL1-201ENST00000395761 NME7Q9Y5B8 376 aa17.74■□□□□ 0.43
CXCL1-201ENST00000395761 STX10O60499 249 aa17.73■□□□□ 0.43
CXCL1-201ENST00000395761 ASS1P00966 412 aaKnown RBP17.73■□□□□ 0.43
CXCL1-201ENST00000395761 WARSP23381 471 aaKnown RBP17.73■□□□□ 0.43
CXCL1-201ENST00000395761 ERCC5P28715 1186 aaPredicted RBP17.73■□□□□ 0.43
CXCL1-201ENST00000395761 ELF1P32519 619 aa17.73■□□□□ 0.43
CXCL1-201ENST00000395761 LHX1P48742 406 aa17.73■□□□□ 0.43
CXCL1-201ENST00000395761 MXI1P50539 228 aa17.73■□□□□ 0.43
CXCL1-201ENST00000395761 CDH8P55286 799 aa17.73■□□□□ 0.43
CXCL1-201ENST00000395761 STX1AQ16623 288 aa17.73■□□□□ 0.43
CXCL1-201ENST00000395761 CCDC142Q17RM4 750 aa17.73■□□□□ 0.43
CXCL1-201ENST00000395761 PPM1LQ5SGD2 360 aa17.73■□□□□ 0.43
CXCL1-201ENST00000395761 ATAT1Q5SQI0 421 aa17.73■□□□□ 0.43
CXCL1-201ENST00000395761 LRSAM1Q6UWE0 723 aa17.73■□□□□ 0.43
CXCL1-201ENST00000395761 IRF2BP1Q8IU81 584 aa17.73■□□□□ 0.43
CXCL1-201ENST00000395761 ACBD6Q9BR61 282 aa17.73■□□□□ 0.43
CXCL1-201ENST00000395761 PRKD2Q9BZL6 878 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms