RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 RUFY4Q6ZNE9 571 aa16.81■□□□□ 0.28
SMARCD1-202ENST00000394963 NTPCRQ9BSD7 190 aaKnown RBP16.81■□□□□ 0.28
SMARCD1-202ENST00000394963 HMGXB4Q9UGU5 601 aa16.81■□□□□ 0.28
SMARCD1-202ENST00000394963 SCINQ9Y6U3 715 aa16.81■□□□□ 0.28
SMARCD1-202ENST00000394963 GZMAP12544 262 aa16.81■□□□□ 0.28
SMARCD1-202ENST00000394963 YY1P25490 414 aa16.81■□□□□ 0.28
SMARCD1-202ENST00000394963 PMS2P54278 862 aa16.81■□□□□ 0.28
SMARCD1-202ENST00000394963 GCNT1Q02742 428 aa16.81■□□□□ 0.28
SMARCD1-202ENST00000394963 CRELD2Q6UXH1 353 aaPredicted RBP16.81■□□□□ 0.28
SMARCD1-202ENST00000394963 TMEM121Q9BTD3 319 aa16.81■□□□□ 0.28
SMARCD1-202ENST00000394963 NXF3Q9H4D5 531 aaKnown RBP16.81■□□□□ 0.28
SMARCD1-202ENST00000394963 NOCTQ9UK39 431 aaKnown RBP16.81■□□□□ 0.28
SMARCD1-202ENST00000394963 I3L4J1 428 aa16.81■□□□□ 0.28
SMARCD1-202ENST00000394963 TEX2Q8IWB9 1127 aa16.81■□□□□ 0.28
SMARCD1-202ENST00000394963 CCNYQ8ND76 341 aa16.81■□□□□ 0.28
SMARCD1-202ENST00000394963 TFAP2BQ92481 460 aa16.81■□□□□ 0.28
SMARCD1-202ENST00000394963 TRIM11Q96F44 468 aa16.81■□□□□ 0.28
SMARCD1-202ENST00000394963 ABHD16BQ9H3Z7 469 aa16.81■□□□□ 0.28
SMARCD1-202ENST00000394963 SAYSD1Q9NPB0 183 aa16.81■□□□□ 0.28
SMARCD1-202ENST00000394963 IKBKGQ9Y6K9 419 aa16.81■□□□□ 0.28
SMARCD1-202ENST00000394963 GOLGA6L7A0A1B0GV03 622 aa16.8■□□□□ 0.28
SMARCD1-202ENST00000394963 WDR91A4D1P6 747 aa16.8■□□□□ 0.28
SMARCD1-202ENST00000394963 PRPSAP2O60256 369 aa16.8■□□□□ 0.28
SMARCD1-202ENST00000394963 CST8O60676 142 aa16.8■□□□□ 0.28
SMARCD1-202ENST00000394963 MSCO60682 206 aa16.8■□□□□ 0.28
SMARCD1-202ENST00000394963 RFC1P35251 1148 aaPredicted RBP16.8■□□□□ 0.28
SMARCD1-202ENST00000394963 CACNB2Q08289 660 aaPredicted RBP16.8■□□□□ 0.28
SMARCD1-202ENST00000394963 DARS2Q6PI48 645 aaKnown RBP16.8■□□□□ 0.28
SMARCD1-202ENST00000394963 GGT7Q9UJ14 662 aa16.8■□□□□ 0.28
SMARCD1-202ENST00000394963 GOLGA8KD6RF30 607 aa16.8■□□□□ 0.28
SMARCD1-202ENST00000394963 MAP2K7O14733 419 aa16.8■□□□□ 0.28
SMARCD1-202ENST00000394963 MAGEB2O15479 319 aa16.8■□□□□ 0.28
SMARCD1-202ENST00000394963 TREHO43280 583 aa16.8■□□□□ 0.28
SMARCD1-202ENST00000394963 MED7O43513 233 aa16.8■□□□□ 0.28
SMARCD1-202ENST00000394963 PPFIA4O75335 1185 aa16.8■□□□□ 0.28
SMARCD1-202ENST00000394963 ARSEP51690 589 aa16.8■□□□□ 0.28
SMARCD1-202ENST00000394963 SLC8A3P57103 927 aa16.8■□□□□ 0.28
SMARCD1-202ENST00000394963 CUL1Q13616 776 aa16.8■□□□□ 0.28
SMARCD1-202ENST00000394963 DCAF12L1Q5VU92 463 aa16.8■□□□□ 0.28
SMARCD1-202ENST00000394963 DSTYKQ6XUX3 929 aa16.8■□□□□ 0.28
SMARCD1-202ENST00000394963 NPLOC4Q8TAT6 608 aa16.8■□□□□ 0.28
SMARCD1-202ENST00000394963 CDHR5Q9HBB8 845 aa16.8■□□□□ 0.28
SMARCD1-202ENST00000394963 MAD1L1Q9Y6D9 718 aa16.8■□□□□ 0.28
SMARCD1-202ENST00000394963 KIAA0100Q14667 2235 aaKnown RBP16.8■□□□□ 0.28
SMARCD1-202ENST00000394963 GBP2P32456 591 aaPredicted RBP16.8■□□□□ 0.28
SMARCD1-202ENST00000394963 COILP38432 576 aaPredicted RBP16.8■□□□□ 0.28
SMARCD1-202ENST00000394963 PTENP60484 403 aa16.8■□□□□ 0.28
SMARCD1-202ENST00000394963 SURF1Q15526 300 aa16.8■□□□□ 0.28
SMARCD1-202ENST00000394963 C15orf59Q2T9L4 293 aaPredicted RBP16.8■□□□□ 0.28
SMARCD1-202ENST00000394963 WDR49Q8IV35 697 aa16.8■□□□□ 0.28
SMARCD1-202ENST00000394963 EXOC8Q8IYI6 725 aa16.8■□□□□ 0.28
SMARCD1-202ENST00000394963 ACTRT1Q8TDG2 376 aa16.8■□□□□ 0.28
SMARCD1-202ENST00000394963 INTUQ9ULD6 942 aa16.8■□□□□ 0.28
SMARCD1-202ENST00000394963 ATP2A1O14983 1001 aa16.79■□□□□ 0.28
SMARCD1-202ENST00000394963 PHF2O75151 1096 aa16.79■□□□□ 0.28
SMARCD1-202ENST00000394963 CHRNA3P32297 505 aa16.79■□□□□ 0.28
SMARCD1-202ENST00000394963 TMED2Q15363 201 aa16.79■□□□□ 0.28
SMARCD1-202ENST00000394963 P3H1Q32P28 736 aa16.79■□□□□ 0.28
SMARCD1-202ENST00000394963 MFSD7Q6UXD7 560 aa16.79■□□□□ 0.28
SMARCD1-202ENST00000394963 MICALL1Q8N3F8 863 aa16.79■□□□□ 0.28
SMARCD1-202ENST00000394963 PRELID2Q8N945 189 aa16.79■□□□□ 0.28
SMARCD1-202ENST00000394963 LPPQ93052 612 aa16.79■□□□□ 0.28
SMARCD1-202ENST00000394963 HES6Q96HZ4 224 aa16.79■□□□□ 0.28
SMARCD1-202ENST00000394963 EIF2AQ9BY44 585 aaKnown RBP16.79■□□□□ 0.28
SMARCD1-202ENST00000394963 ISCUQ9H1K1 167 aa16.79■□□□□ 0.28
SMARCD1-202ENST00000394963 R3HDM2Q9Y2K5 976 aaKnown RBP16.79■□□□□ 0.28
SMARCD1-202ENST00000394963 CREB3O43889 395 aa16.79■□□□□ 0.28
SMARCD1-202ENST00000394963 CALB1P05937 261 aa16.79■□□□□ 0.28
SMARCD1-202ENST00000394963 IQCF3P0C7M6 154 aa16.79■□□□□ 0.28
SMARCD1-202ENST00000394963 RPL21P46778 160 aaKnown RBP16.79■□□□□ 0.28
SMARCD1-202ENST00000394963 NDRG1Q92597 394 aaKnown RBP16.79■□□□□ 0.28
SMARCD1-202ENST00000394963 ZFP42Q96MM3 310 aa16.79■□□□□ 0.28
SMARCD1-202ENST00000394963 SLITRK6Q9H5Y7 841 aa16.79■□□□□ 0.28
SMARCD1-202ENST00000394963 DHX35Q9H5Z1 703 aaKnown RBP16.79■□□□□ 0.28
SMARCD1-202ENST00000394963 ADAMTS5Q9UNA0 930 aa16.79■□□□□ 0.28
SMARCD1-202ENST00000394963 ZNF831Q5JPB2 1677 aa16.79■□□□□ 0.28
SMARCD1-202ENST00000394963 SYF2O95926 243 aaKnown RBP16.78■□□□□ 0.28
SMARCD1-202ENST00000394963 SNRPFP62306 86 aaKnown RBP16.78■□□□□ 0.28
SMARCD1-202ENST00000394963 RBP5P82980 135 aa16.78■□□□□ 0.28
SMARCD1-202ENST00000394963 GOLGA7BQ2TAP0 167 aa16.78■□□□□ 0.28
SMARCD1-202ENST00000394963 IZUMO3Q5VZ72 239 aa16.78■□□□□ 0.28
SMARCD1-202ENST00000394963 FOXR2Q6PJQ5 311 aa16.78■□□□□ 0.28
SMARCD1-202ENST00000394963 ZPBP2Q6X784 338 aa16.78■□□□□ 0.28
SMARCD1-202ENST00000394963 EXOC4Q96A65 974 aa16.78■□□□□ 0.28
SMARCD1-202ENST00000394963 B3GNT5Q9BYG0 378 aa16.78■□□□□ 0.28
SMARCD1-202ENST00000394963 ITGA8P53708 1063 aa16.78■□□□□ 0.28
SMARCD1-202ENST00000394963 EPS8L3Q8TE67 593 aaKnown RBP16.78■□□□□ 0.28
SMARCD1-202ENST00000394963 AENQ8WTP8 325 aaKnown RBP16.78■□□□□ 0.28
SMARCD1-202ENST00000394963 CCDC77Q9BR77 488 aa16.78■□□□□ 0.28
SMARCD1-202ENST00000394963 LRRC4Q9HBW1 653 aa16.78■□□□□ 0.28
SMARCD1-202ENST00000394963 PIH1D1Q9NWS0 290 aaKnown RBP16.78■□□□□ 0.28
SMARCD1-202ENST00000394963 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.78■□□□□ 0.28
SMARCD1-202ENST00000394963 IP6K2Q9UHH9 426 aa16.78■□□□□ 0.28
SMARCD1-202ENST00000394963 CCDC78A2IDD5 438 aa16.78■□□□□ 0.28
SMARCD1-202ENST00000394963 CASTOR2A6NHX0 329 aa16.78■□□□□ 0.28
SMARCD1-202ENST00000394963 RASGRF2O14827 1237 aa16.78■□□□□ 0.28
SMARCD1-202ENST00000394963 HUS1O60921 280 aa16.78■□□□□ 0.28
SMARCD1-202ENST00000394963 CNMDO75829 334 aa16.78■□□□□ 0.28
SMARCD1-202ENST00000394963 ICAM3P32942 547 aa16.78■□□□□ 0.28
SMARCD1-202ENST00000394963 NRLP54845 237 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms