RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 MFSD14CQ5VZR4 134 aa12.77□□□□□ -0.36
SIN3A-202ENST00000394947 PRR23CQ6ZRP0 262 aa12.77□□□□□ -0.36
SIN3A-202ENST00000394947 LEMD2Q8NC56 503 aa12.77□□□□□ -0.36
SIN3A-202ENST00000394947 ZNF335Q9H4Z2 1342 aaPredicted RBP12.77□□□□□ -0.36
SIN3A-202ENST00000394947 MT-CO1P00395 513 aa12.77□□□□□ -0.37
SIN3A-202ENST00000394947 ADSLP30566 484 aaPredicted RBP12.77□□□□□ -0.37
SIN3A-202ENST00000394947 YWHABP31946 246 aaKnown RBP12.77□□□□□ -0.37
SIN3A-202ENST00000394947 LLGL2Q6P1M3 1020 aa12.77□□□□□ -0.37
SIN3A-202ENST00000394947 RD3Q7Z3Z2 195 aa12.77□□□□□ -0.37
SIN3A-202ENST00000394947 DHX36Q9H2U1 1008 aaKnown RBP12.77□□□□□ -0.37
SIN3A-202ENST00000394947 PHKG1Q16816 387 aa12.77□□□□□ -0.37
SIN3A-202ENST00000394947 C10orf120Q5SQS8 335 aa12.77□□□□□ -0.37
SIN3A-202ENST00000394947 E4F1Q66K89 784 aaPredicted RBP12.77□□□□□ -0.37
SIN3A-202ENST00000394947 SLC25A24Q6NUK1 477 aa12.77□□□□□ -0.37
SIN3A-202ENST00000394947 KLHL17Q6TDP4 642 aa12.77□□□□□ -0.37
SIN3A-202ENST00000394947 FAM71DQ8N9W8 422 aa12.77□□□□□ -0.37
SIN3A-202ENST00000394947 CATSPER1Q8NEC5 780 aa12.77□□□□□ -0.37
SIN3A-202ENST00000394947 SH3TC2Q8TF17 1288 aa12.77□□□□□ -0.37
SIN3A-202ENST00000394947 NMD3Q96D46 503 aaKnown RBP12.77□□□□□ -0.37
SIN3A-202ENST00000394947 LAMC3Q9Y6N6 1575 aa12.77□□□□□ -0.37
SIN3A-202ENST00000394947 MIF4GDA9UHW6 222 aaKnown RBP12.77□□□□□ -0.37
SIN3A-202ENST00000394947 PRKCBP05771 671 aa12.77□□□□□ -0.37
SIN3A-202ENST00000394947 PDGFRAP16234 1089 aa12.77□□□□□ -0.37
SIN3A-202ENST00000394947 GUCA1AP43080 201 aaPredicted RBP12.77□□□□□ -0.37
SIN3A-202ENST00000394947 PLCL1Q15111 1095 aa12.77□□□□□ -0.37
SIN3A-202ENST00000394947 GOLGA7BQ2TAP0 167 aa12.77□□□□□ -0.37
SIN3A-202ENST00000394947 DENND5BQ6ZUT9 1274 aa12.77□□□□□ -0.37
SIN3A-202ENST00000394947 GATAD2AQ86YP4 633 aa12.77□□□□□ -0.37
SIN3A-202ENST00000394947 HASPINQ8TF76 798 aa12.77□□□□□ -0.37
SIN3A-202ENST00000394947 SPACA7Q96KW9 195 aa12.77□□□□□ -0.37
SIN3A-202ENST00000394947 KIFC1Q9BW19 673 aa12.77□□□□□ -0.37
SIN3A-202ENST00000394947 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.77□□□□□ -0.372e-7■■■□□ 17.1
SIN3A-202ENST00000394947 RNF181Q9P0P0 153 aa12.77□□□□□ -0.37
SIN3A-202ENST00000394947 EIF2AK4Q9P2K8 1649 aaKnown RBP12.77□□□□□ -0.37
SIN3A-202ENST00000394947 HPGDP15428 266 aa12.77□□□□□ -0.37
SIN3A-202ENST00000394947 TMEM47Q9BQJ4 181 aa12.77□□□□□ -0.37
SIN3A-202ENST00000394947 OSGEPL1Q9H4B0 414 aa12.77□□□□□ -0.37
SIN3A-202ENST00000394947 RNF112Q9ULX5 631 aa12.77□□□□□ -0.37
SIN3A-202ENST00000394947 SSH2Q76I76 1423 aa12.77□□□□□ -0.37
SIN3A-202ENST00000394947 RBM15Q96T37 977 aaKnown RBP eCLIP12.76□□□□□ -0.371e-6■■■□□ 15.4
SIN3A-202ENST00000394947 KATNAL1Q9BW62 490 aa12.76□□□□□ -0.37
SIN3A-202ENST00000394947 TUFT1Q9NNX1 390 aa12.76□□□□□ -0.37
SIN3A-202ENST00000394947 CNGB3Q9NQW8 809 aa12.76□□□□□ -0.37
SIN3A-202ENST00000394947 ABI2Q9NYB9 513 aaPredicted RBP12.76□□□□□ -0.37
SIN3A-202ENST00000394947 LSM7Q9UK45 103 aaKnown RBP12.76□□□□□ -0.37
SIN3A-202ENST00000394947 FEM1BQ9UK73 627 aa12.76□□□□□ -0.37
SIN3A-202ENST00000394947 APPL1Q9UKG1 709 aa12.76□□□□□ -0.37
SIN3A-202ENST00000394947 RUVBL2Q9Y230 463 aaKnown RBP12.76□□□□□ -0.37
SIN3A-202ENST00000394947 IGF2BP3O00425 579 aaKnown RBP eCLIP12.76□□□□□ -0.37
SIN3A-202ENST00000394947 CDC27P30260 824 aa12.76□□□□□ -0.37
SIN3A-202ENST00000394947 QARSP47897 775 aaKnown RBP12.76□□□□□ -0.37
SIN3A-202ENST00000394947 KCNJ1P48048 391 aa12.76□□□□□ -0.37
SIN3A-202ENST00000394947 CLK2P49760 499 aaKnown RBP12.76□□□□□ -0.37
SIN3A-202ENST00000394947 CLEC16AQ2KHT3 1053 aa12.76□□□□□ -0.37
SIN3A-202ENST00000394947 RSBN1Q5VWQ0 802 aaPredicted RBP12.76□□□□□ -0.37
SIN3A-202ENST00000394947 PLA2G4FQ68DD2 849 aa12.76□□□□□ -0.37
SIN3A-202ENST00000394947 GJB7Q6PEY0 223 aa12.76□□□□□ -0.37
SIN3A-202ENST00000394947 NUDT18Q6ZVK8 323 aa12.76□□□□□ -0.37
SIN3A-202ENST00000394947 MED8Q96G25 268 aa12.76□□□□□ -0.37
SIN3A-202ENST00000394947 TMEM191CA6NGB0 347 aa12.76□□□□□ -0.37
SIN3A-202ENST00000394947 PCP11498 1178 aaKnown RBP12.76□□□□□ -0.37
SIN3A-202ENST00000394947 CYP2C19P33261 490 aa12.76□□□□□ -0.37
SIN3A-202ENST00000394947 SARSP49591 514 aaKnown RBP12.76□□□□□ -0.37
SIN3A-202ENST00000394947 VSNL1P62760 191 aa12.76□□□□□ -0.37
SIN3A-202ENST00000394947 NBPF9Q3BBW0 867 aa12.76□□□□□ -0.37
SIN3A-202ENST00000394947 C2CD6Q53TS8 623 aa12.76□□□□□ -0.37
SIN3A-202ENST00000394947 C19orf18Q8NEA5 215 aa12.76□□□□□ -0.37
SIN3A-202ENST00000394947 FLAD1Q8NFF5 587 aa12.76□□□□□ -0.37
SIN3A-202ENST00000394947 MTFMTQ96DP5 389 aaKnown RBP12.76□□□□□ -0.37
SIN3A-202ENST00000394947 ZBTB10Q96DT7 871 aa12.76□□□□□ -0.37
SIN3A-202ENST00000394947 MLH3Q9UHC1 1453 aa12.76□□□□□ -0.37
SIN3A-202ENST00000394947 DNALI1O14645 258 aaPredicted RBP12.76□□□□□ -0.37
SIN3A-202ENST00000394947 PEX1O43933 1283 aa12.76□□□□□ -0.37
SIN3A-202ENST00000394947 ASNSP08243 561 aa12.76□□□□□ -0.37
SIN3A-202ENST00000394947 YWHAQP27348 245 aa12.76□□□□□ -0.37
SIN3A-202ENST00000394947 GPR1P46091 355 aa12.76□□□□□ -0.37
SIN3A-202ENST00000394947 DUOXA2Q1HG44 320 aa12.76□□□□□ -0.37
SIN3A-202ENST00000394947 PLEKHA7Q6IQ23 1121 aa12.76□□□□□ -0.37
SIN3A-202ENST00000394947 SDE2Q6IQ49 451 aa12.76□□□□□ -0.37
SIN3A-202ENST00000394947 TMEM179Q6ZVK1 233 aa12.76□□□□□ -0.37
SIN3A-202ENST00000394947 TADA1Q96BN2 335 aa12.76□□□□□ -0.37
SIN3A-202ENST00000394947 SEC16BQ96JE7 1060 aa12.76□□□□□ -0.37
SIN3A-202ENST00000394947 CRLS1Q9UJA2 301 aa12.76□□□□□ -0.37
SIN3A-202ENST00000394947 PCDHGA3Q9Y5H0 932 aa12.76□□□□□ -0.37
SIN3A-202ENST00000394947 EDC4Q6P2E9 1401 aaKnown RBP12.76□□□□□ -0.37
SIN3A-202ENST00000394947 KLC1Q07866 573 aa12.76□□□□□ -0.37
SIN3A-202ENST00000394947 TPD52L3Q96J77 140 aa12.76□□□□□ -0.37
SIN3A-202ENST00000394947 MOV10L1Q9BXT6 1211 aaKnown RBP12.76□□□□□ -0.37
SIN3A-202ENST00000394947 HOXC10Q9NYD6 342 aa12.76□□□□□ -0.37
SIN3A-202ENST00000394947 ARL2BPQ9Y2Y0 163 aa12.76□□□□□ -0.37
SIN3A-202ENST00000394947 HEATR9A2RTY3 570 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 MMP10P09238 476 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 FGFR1P11362 822 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 NCAM1P13591 858 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 AP3B2Q13367 1082 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 ARL6IP4Q66PJ3 421 aaKnown RBP12.75□□□□□ -0.37
SIN3A-202ENST00000394947 MACC1Q6ZN28 852 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 RASGRP2Q7LDG7 609 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 FBXO40Q9UH90 709 aa12.75□□□□□ -0.37
SIN3A-202ENST00000394947 CFAP73A6NFT4 308 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms