RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 ADAM21Q9UKJ8 722 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.85□□□□□ -0.67
COL4A6-203ENST00000394872 ATMINO43313 823 aaPredicted RBP10.85□□□□□ -0.67
COL4A6-203ENST00000394872 HSPA1AP0DMV8 641 aaKnown RBP10.85□□□□□ -0.67
COL4A6-203ENST00000394872 HSPA1BP0DMV9 641 aaKnown RBP10.85□□□□□ -0.67
COL4A6-203ENST00000394872 KRT4P19013 534 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 RPA1P27694 616 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 SLC11A2P49281 568 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 HDAC4P56524 1084 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 ZNF177Q13360 481 aaPredicted RBP10.85□□□□□ -0.67
COL4A6-203ENST00000394872 C6orf10Q5SRN2 563 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 OOSP2Q86WS3 158 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 CDR2LQ86X02 465 aaPredicted RBP10.85□□□□□ -0.67
COL4A6-203ENST00000394872 SLC16A10Q8TF71 515 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 RBM15Q96T37 977 aaKnown RBP eCLIP10.85□□□□□ -0.67
COL4A6-203ENST00000394872 FAM118BQ9BPY3 351 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 RSAD1Q9HA92 442 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 SLC25A13Q9UJS0 675 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 UBQLN1Q9UMX0 589 aaKnown RBP10.85□□□□□ -0.67
COL4A6-203ENST00000394872 YY1P25490 414 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 FMR1Q06787 632 aaKnown RBP eCLIP10.85□□□□□ -0.67
COL4A6-203ENST00000394872 BYSLQ13895 437 aaKnown RBP10.85□□□□□ -0.67
COL4A6-203ENST00000394872 INPP5AQ14642 412 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 RARS2Q5T160 578 aaKnown RBP10.85□□□□□ -0.67
COL4A6-203ENST00000394872 CHP1Q99653 195 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 PSD3Q9NYI0 1048 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 TBX20Q9UMR3 447 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 FAM32AQ9Y421 112 aaKnown RBP10.85□□□□□ -0.67
COL4A6-203ENST00000394872 MED14O60244 1454 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 CD163L1Q9NR16 1453 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 ENO1P06733 434 aaKnown RBP10.85□□□□□ -0.67
COL4A6-203ENST00000394872 CHRM3P20309 590 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 CCDC85BQ15834 202 aaPredicted RBP10.85□□□□□ -0.67
COL4A6-203ENST00000394872 GAS2O43903 313 aaKnown RBP10.85□□□□□ -0.67
COL4A6-203ENST00000394872 CHGBP05060 677 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 POLBP06746 335 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 MZF1P28698 734 aaPredicted RBP10.85□□□□□ -0.67
COL4A6-203ENST00000394872 STK4Q13043 487 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 DMC1Q14565 340 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 DPF2Q92785 391 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 WDCPQ9H6R7 721 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 GIMAP4Q9NUV9 329 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 CRLS1Q9UJA2 301 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 SNX12Q9UMY4 172 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 ARHGAP26Q9UNA1 814 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 CHMP2BQ9UQN3 213 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 TTLL13PA6NNM8 815 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 SLC9A1P19634 815 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 ITIH2P19823 946 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 EPHX2P34913 555 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 FXR2P51116 673 aaKnown RBP eCLIP10.85□□□□□ -0.67
COL4A6-203ENST00000394872 HIC1Q14526 733 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 EDRF1Q3B7T1 1238 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.85□□□□□ -0.67
COL4A6-203ENST00000394872 LRRC1Q9BTT6 524 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 RHOBTB1O94844 696 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 SOAT1P35610 550 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 MAP3K10Q02779 954 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 SGO1Q5FBB7 561 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 ZNF677Q86XU0 584 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 TMA16Q96EY4 203 aaKnown RBP10.85□□□□□ -0.67
COL4A6-203ENST00000394872 YME1L1Q96TA2 773 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 AGPAT5Q9NUQ2 364 aa10.85□□□□□ -0.67
COL4A6-203ENST00000394872 C6orf203Q9P0P8 240 aaPredicted RBP10.85□□□□□ -0.67
COL4A6-203ENST00000394872 TCP11X1B4DZS4 312 aa10.84□□□□□ -0.67
COL4A6-203ENST00000394872 MBL2P11226 248 aaPredicted RBP10.84□□□□□ -0.67
COL4A6-203ENST00000394872 CAP2P40123 477 aa10.84□□□□□ -0.67
COL4A6-203ENST00000394872 CSE1LP55060 971 aaKnown RBP10.84□□□□□ -0.67
COL4A6-203ENST00000394872 NAB2Q15742 525 aa10.84□□□□□ -0.67
COL4A6-203ENST00000394872 LONRF1Q17RB8 773 aa10.84□□□□□ -0.67
COL4A6-203ENST00000394872 RUBCNQ92622 972 aa10.84□□□□□ -0.67
COL4A6-203ENST00000394872 TSC22D3Q99576 134 aa10.84□□□□□ -0.67
COL4A6-203ENST00000394872 ANKRD65E5RJM6 399 aa10.84□□□□□ -0.67
COL4A6-203ENST00000394872 SPRP35270 261 aaPredicted RBP10.84□□□□□ -0.67
COL4A6-203ENST00000394872 STX3Q13277 289 aa10.84□□□□□ -0.67
COL4A6-203ENST00000394872 NBPF9Q3BBW0 867 aa10.84□□□□□ -0.67
COL4A6-203ENST00000394872 ZNF484Q5JVG2 852 aa10.84□□□□□ -0.67
COL4A6-203ENST00000394872 FEZF2Q8TBJ5 459 aa10.84□□□□□ -0.67
COL4A6-203ENST00000394872 MAP3K14Q99558 947 aa10.84□□□□□ -0.67
COL4A6-203ENST00000394872 OLFML3Q9NRN5 406 aa10.84□□□□□ -0.67
COL4A6-203ENST00000394872 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.84□□□□□ -0.67
COL4A6-203ENST00000394872 PSMC3IPQ9P2W1 217 aaPredicted RBP10.84□□□□□ -0.67
COL4A6-203ENST00000394872 ABCA6Q8N139 1617 aa10.84□□□□□ -0.67
COL4A6-203ENST00000394872 A0A1B0GTH6 734 aa10.84□□□□□ -0.67
COL4A6-203ENST00000394872 PGK2P07205 417 aa10.84□□□□□ -0.67
COL4A6-203ENST00000394872 PTK6Q13882 451 aa10.84□□□□□ -0.67
COL4A6-203ENST00000394872 EPC2Q52LR7 807 aa10.84□□□□□ -0.67
COL4A6-203ENST00000394872 SEZ6Q53EL9 994 aa10.84□□□□□ -0.67
COL4A6-203ENST00000394872 LRRC23Q53EV4 343 aaPredicted RBP10.84□□□□□ -0.67
COL4A6-203ENST00000394872 CCDC157Q569K6 752 aa10.84□□□□□ -0.67
COL4A6-203ENST00000394872 DPF3Q92784 378 aa10.84□□□□□ -0.67
COL4A6-203ENST00000394872 EPC1Q9H2F5 836 aa10.84□□□□□ -0.67
COL4A6-203ENST00000394872 HEATR9A2RTY3 570 aa10.84□□□□□ -0.67
COL4A6-203ENST00000394872 KDSRQ06136 332 aa10.84□□□□□ -0.67
COL4A6-203ENST00000394872 PTK7Q13308 1070 aa10.84□□□□□ -0.67
COL4A6-203ENST00000394872 BFSP2Q13515 415 aa10.84□□□□□ -0.67
COL4A6-203ENST00000394872 POLD3Q15054 466 aaPredicted RBP10.84□□□□□ -0.67
COL4A6-203ENST00000394872 MTFR1Q15390 333 aa10.84□□□□□ -0.67
COL4A6-203ENST00000394872 TFB1MQ8WVM0 346 aaKnown RBP10.84□□□□□ -0.67
COL4A6-203ENST00000394872 FBXO28Q9NVF7 368 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms