RNA–Protein interactions for RNA: ENST00000394848.5

SSH2-203, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-203ENST00000394848 PARP2Q9UGN5 583 aa13.4□□□□□ -0.26
SSH2-203ENST00000394848 CCDC85CA6NKD9 419 aa13.39□□□□□ -0.27
SSH2-203ENST00000394848 DCDC2CA8MYV0 355 aa13.39□□□□□ -0.27
SSH2-203ENST00000394848 PQBP1O60828 265 aaKnown RBP13.39□□□□□ -0.27
SSH2-203ENST00000394848 RPS6KA5O75582 802 aa13.39□□□□□ -0.27
SSH2-203ENST00000394848 CHRNA1P02708 482 aa13.39□□□□□ -0.27
SSH2-203ENST00000394848 BRD2P25440 801 aaKnown RBP13.39□□□□□ -0.27
SSH2-203ENST00000394848 C2orf54Q08AI8 447 aa13.39□□□□□ -0.27
SSH2-203ENST00000394848 TRIM71Q2Q1W2 868 aaKnown RBP13.39□□□□□ -0.27
SSH2-203ENST00000394848 TRIM60Q495X7 471 aa13.39□□□□□ -0.27
SSH2-203ENST00000394848 LIN9Q5TKA1 542 aa13.39□□□□□ -0.27
SSH2-203ENST00000394848 TWF2Q6IBS0 349 aaKnown RBP13.39□□□□□ -0.27
SSH2-203ENST00000394848 MTERF4Q7Z6M4 381 aaKnown RBP13.39□□□□□ -0.27
SSH2-203ENST00000394848 PHF13Q86YI8 300 aaPredicted RBP13.39□□□□□ -0.27
SSH2-203ENST00000394848 MSANTD4Q8NCY6 345 aa13.39□□□□□ -0.27
SSH2-203ENST00000394848 RPS6KC1Q96S38 1066 aa13.39□□□□□ -0.27
SSH2-203ENST00000394848 SMYD3Q9H7B4 428 aa13.39□□□□□ -0.27
SSH2-203ENST00000394848 AVENQ9NQS1 362 aaPredicted RBP13.39□□□□□ -0.27
SSH2-203ENST00000394848 ARGLU1Q9NWB6 273 aaPredicted RBP13.39□□□□□ -0.27
SSH2-203ENST00000394848 ADAM22Q9P0K1 906 aa13.39□□□□□ -0.27
SSH2-203ENST00000394848 ST3GAL5Q9UNP4 418 aa13.39□□□□□ -0.27
SSH2-203ENST00000394848 IPPQ9Y573 584 aa13.39□□□□□ -0.27
SSH2-203ENST00000394848 SMIM28A0A1B0GU29 152 aa13.38□□□□□ -0.27
SSH2-203ENST00000394848 TMEM110-MUSTN1A8MSY1 372 aa13.38□□□□□ -0.27
SSH2-203ENST00000394848 TLR3O15455 904 aaKnown RBP13.38□□□□□ -0.27
SSH2-203ENST00000394848 CEP104O60308 925 aa13.38□□□□□ -0.27
SSH2-203ENST00000394848 CAND2O75155 1236 aa13.38□□□□□ -0.27
SSH2-203ENST00000394848 LSM8O95777 96 aaKnown RBP13.38□□□□□ -0.27
SSH2-203ENST00000394848 PAEPP09466 180 aa13.38□□□□□ -0.27
SSH2-203ENST00000394848 CTSHP09668 335 aa13.38□□□□□ -0.27
SSH2-203ENST00000394848 RRM1P23921 792 aa13.38□□□□□ -0.27
SSH2-203ENST00000394848 RAD23BP54727 409 aa13.38□□□□□ -0.27
SSH2-203ENST00000394848 RNASE9P60153 205 aaKnown RBP13.38□□□□□ -0.27
SSH2-203ENST00000394848 TNNC1P63316 161 aa13.38□□□□□ -0.27
SSH2-203ENST00000394848 C1QBPQ07021 282 aaKnown RBP13.38□□□□□ -0.27
SSH2-203ENST00000394848 FAAP100Q0VG06 881 aa13.38□□□□□ -0.27
SSH2-203ENST00000394848 NFX1Q12986 1120 aaKnown RBP13.38□□□□□ -0.27
SSH2-203ENST00000394848 MON1BQ7L1V2 547 aa13.38□□□□□ -0.27
SSH2-203ENST00000394848 MMGT1Q8N4V1 131 aa13.38□□□□□ -0.27
SSH2-203ENST00000394848 TMEM35BQ8NCS4 154 aa13.38□□□□□ -0.27
SSH2-203ENST00000394848 UBE2Q2Q8WVN8 375 aa13.38□□□□□ -0.27
SSH2-203ENST00000394848 TFAP2BQ92481 460 aa13.38□□□□□ -0.27
SSH2-203ENST00000394848 C18orf25Q96B23 403 aaPredicted RBP13.38□□□□□ -0.27
SSH2-203ENST00000394848 TSPAN18Q96SJ8 248 aa13.38□□□□□ -0.27
SSH2-203ENST00000394848 ZSWIM1Q9BR11 485 aa13.38□□□□□ -0.27
SSH2-203ENST00000394848 ZNF518BQ9C0D4 1074 aa13.38□□□□□ -0.27
SSH2-203ENST00000394848 KLK14Q9P0G3 267 aa13.38□□□□□ -0.27
SSH2-203ENST00000394848 UBQLN1Q9UMX0 589 aaKnown RBP13.38□□□□□ -0.27
SSH2-203ENST00000394848 DDX3YO15523 660 aaKnown RBP13.37□□□□□ -0.27
SSH2-203ENST00000394848 MED7O43513 233 aa13.37□□□□□ -0.27
SSH2-203ENST00000394848 CILPO75339 1184 aa13.37□□□□□ -0.27
SSH2-203ENST00000394848 TUBBP07437 444 aa13.37□□□□□ -0.27
SSH2-203ENST00000394848 KCNE1P15382 129 aa13.37□□□□□ -0.27
SSH2-203ENST00000394848 CD19P15391 556 aa13.37□□□□□ -0.27
SSH2-203ENST00000394848 COMTP21964 271 aa13.37□□□□□ -0.27
SSH2-203ENST00000394848 THPOP40225 353 aa13.37□□□□□ -0.27
SSH2-203ENST00000394848 C2CD6Q53TS8 623 aa13.37□□□□□ -0.27
SSH2-203ENST00000394848 XKR4Q5GH76 650 aa13.37□□□□□ -0.27
SSH2-203ENST00000394848 GLRA4Q5JXX5 417 aa13.37□□□□□ -0.27
SSH2-203ENST00000394848 PHLDB2Q86SQ0 1253 aa13.37□□□□□ -0.27
SSH2-203ENST00000394848 TTC39CQ8N584 583 aa13.37□□□□□ -0.27
SSH2-203ENST00000394848 SMG8Q8ND04 991 aaKnown RBP13.37□□□□□ -0.27
SSH2-203ENST00000394848 ACTRT1Q8TDG2 376 aa13.37□□□□□ -0.27
SSH2-203ENST00000394848 WHAMMQ8TF30 809 aa13.37□□□□□ -0.27
SSH2-203ENST00000394848 TMEM176AQ96HP8 235 aa13.37□□□□□ -0.27
SSH2-203ENST00000394848 BTBD6Q96KE9 485 aa13.37□□□□□ -0.27
SSH2-203ENST00000394848 C11orf70Q9BRQ4 267 aa13.37□□□□□ -0.27
SSH2-203ENST00000394848 FAM124BQ9H5Z6 455 aaPredicted RBP13.37□□□□□ -0.27
SSH2-203ENST00000394848 RNF19AQ9NV58 838 aa13.37□□□□□ -0.27
SSH2-203ENST00000394848 TUBGCP4Q9UGJ1 667 aa13.37□□□□□ -0.27
SSH2-203ENST00000394848 PCDHGC3Q9UN70 934 aa13.37□□□□□ -0.27
SSH2-203ENST00000394848 ATP11BQ9Y2G3 1177 aa13.37□□□□□ -0.27
SSH2-203ENST00000394848 MIF4GDA9UHW6 222 aaKnown RBP13.37□□□□□ -0.27
SSH2-203ENST00000394848 GPR182O15218 404 aa13.37□□□□□ -0.27
SSH2-203ENST00000394848 MMP8P22894 467 aa13.37□□□□□ -0.27
SSH2-203ENST00000394848 MGAT3Q09327 533 aa13.37□□□□□ -0.27
SSH2-203ENST00000394848 CCDC70Q6NSX1 233 aa13.37□□□□□ -0.27
SSH2-203ENST00000394848 MMS22LQ6ZRQ5 1243 aa13.37□□□□□ -0.27
SSH2-203ENST00000394848 LRRC52Q8N7C0 313 aa13.37□□□□□ -0.27
SSH2-203ENST00000394848 USP38Q8NB14 1042 aa13.37□□□□□ -0.27
SSH2-203ENST00000394848 SLC4A11Q8NBS3 891 aa13.37□□□□□ -0.27
SSH2-203ENST00000394848 PNKPQ96T60 521 aa13.37□□□□□ -0.27
SSH2-203ENST00000394848 ELOVL4Q9GZR5 314 aa13.37□□□□□ -0.27
SSH2-203ENST00000394848 MRPL47Q9HD33 250 aaKnown RBP13.37□□□□□ -0.27
SSH2-203ENST00000394848 CHST12Q9NRB3 414 aa13.37□□□□□ -0.27
SSH2-203ENST00000394848 BARX2Q9UMQ3 279 aaPredicted RBP13.37□□□□□ -0.27
SSH2-203ENST00000394848 CEP83Q9Y592 693 aa13.37□□□□□ -0.27
SSH2-203ENST00000394848 MYH10P35580 1976 aa13.36□□□□□ -0.27
SSH2-203ENST00000394848 PITPNM1O00562 1244 aa13.36□□□□□ -0.27
SSH2-203ENST00000394848 XPOTO43592 962 aaKnown RBP13.36□□□□□ -0.27
SSH2-203ENST00000394848 CKBP12277 381 aa13.36□□□□□ -0.27
SSH2-203ENST00000394848 CLCN6P51797 869 aa13.36□□□□□ -0.27
SSH2-203ENST00000394848 PTP4A2Q12974 167 aa13.36□□□□□ -0.27
SSH2-203ENST00000394848 ORC1Q13415 861 aa13.36□□□□□ -0.27
SSH2-203ENST00000394848 BFSP2Q13515 415 aa13.36□□□□□ -0.27
SSH2-203ENST00000394848 FAM26DQ5JW98 314 aa13.36□□□□□ -0.27
SSH2-203ENST00000394848 C9orf57Q5W0N0 161 aa13.36□□□□□ -0.27
SSH2-203ENST00000394848 RASGEF1CQ8N431 466 aa13.36□□□□□ -0.27
SSH2-203ENST00000394848 WDTC1Q8N5D0 677 aa13.36□□□□□ -0.27
SSH2-203ENST00000394848 UBL4BQ8N7F7 174 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms