RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 ALG13Q9NP73 1137 aaKnown RBP12.29□□□□□ -0.44
UBE2D3-209ENST00000394804 GRHL1Q9NZI5 618 aa12.29□□□□□ -0.44
UBE2D3-209ENST00000394804 A6NJR5 290 aa12.29□□□□□ -0.44
UBE2D3-209ENST00000394804 MAP3K7O43318 606 aa12.29□□□□□ -0.44
UBE2D3-209ENST00000394804 ITGB5P18084 799 aa12.29□□□□□ -0.44
UBE2D3-209ENST00000394804 DCAF12L1Q5VU92 463 aa12.29□□□□□ -0.44
UBE2D3-209ENST00000394804 KCNV1Q6PIU1 500 aa12.29□□□□□ -0.44
UBE2D3-209ENST00000394804 C3orf62Q6ZUJ4 267 aa12.29□□□□□ -0.44
UBE2D3-209ENST00000394804 SAMD3Q8N6K7 520 aa12.29□□□□□ -0.44
UBE2D3-209ENST00000394804 PSPC1Q8WXF1 523 aaKnown RBP12.29□□□□□ -0.44
UBE2D3-209ENST00000394804 TSSK1BQ9BXA7 367 aa12.29□□□□□ -0.44
UBE2D3-209ENST00000394804 NGRNQ9NPE2 291 aaKnown RBP12.29□□□□□ -0.44
UBE2D3-209ENST00000394804 CYP26B1Q9NR63 512 aa12.29□□□□□ -0.44
UBE2D3-209ENST00000394804 ANGPTL2Q9UKU9 493 aa12.29□□□□□ -0.44
UBE2D3-209ENST00000394804 A0A1B0GUL6 1792 aa12.29□□□□□ -0.44
UBE2D3-209ENST00000394804 DDX60Q8IY21 1712 aaKnown RBP12.29□□□□□ -0.44
UBE2D3-209ENST00000394804 ZNF831Q5JPB2 1677 aa12.29□□□□□ -0.44
UBE2D3-209ENST00000394804 KRT38O76015 456 aa12.29□□□□□ -0.44
UBE2D3-209ENST00000394804 GEMIN4P57678 1058 aaKnown RBP12.29□□□□□ -0.44
UBE2D3-209ENST00000394804 ROR1Q01973 937 aa12.29□□□□□ -0.44
UBE2D3-209ENST00000394804 CDO1Q16878 200 aa12.29□□□□□ -0.44
UBE2D3-209ENST00000394804 SDCCAG8Q86SQ7 713 aaPredicted RBP12.29□□□□□ -0.44
UBE2D3-209ENST00000394804 CRLF3Q8IUI8 442 aa12.29□□□□□ -0.44
UBE2D3-209ENST00000394804 ABRAQ8N0Z2 381 aa12.29□□□□□ -0.44
UBE2D3-209ENST00000394804 NLRP4Q96MN2 994 aa12.29□□□□□ -0.44
UBE2D3-209ENST00000394804 L3MBTL1Q9Y468 752 aa12.29□□□□□ -0.44
UBE2D3-209ENST00000394804 NAV1Q8NEY1 1877 aa12.29□□□□□ -0.44
UBE2D3-209ENST00000394804 TCRBV7S2A1N4TA0A589 114 aa12.28□□□□□ -0.44
UBE2D3-209ENST00000394804 CST8O60676 142 aa12.28□□□□□ -0.44
UBE2D3-209ENST00000394804 RASSF9O75901 435 aa12.28□□□□□ -0.44
UBE2D3-209ENST00000394804 KRT4P19013 534 aa12.28□□□□□ -0.44
UBE2D3-209ENST00000394804 CHKAP35790 457 aa12.28□□□□□ -0.44
UBE2D3-209ENST00000394804 ZNF568Q3ZCX4 644 aa12.28□□□□□ -0.44
UBE2D3-209ENST00000394804 SPOPLQ6IQ16 392 aa12.28□□□□□ -0.44
UBE2D3-209ENST00000394804 GPAT2Q6NUI2 795 aa12.28□□□□□ -0.44
UBE2D3-209ENST00000394804 ZDHHC24Q6UX98 284 aa12.28□□□□□ -0.44
UBE2D3-209ENST00000394804 CRELD2Q6UXH1 353 aaPredicted RBP12.28□□□□□ -0.44
UBE2D3-209ENST00000394804 PPIL6Q8IXY8 311 aa12.28□□□□□ -0.44
UBE2D3-209ENST00000394804 VCPIP1Q96JH7 1222 aa12.28□□□□□ -0.44
UBE2D3-209ENST00000394804 FAM167AQ96KS9 214 aa12.28□□□□□ -0.44
UBE2D3-209ENST00000394804 HEXIM2Q96MH2 286 aaKnown RBP12.28□□□□□ -0.44
UBE2D3-209ENST00000394804 IFT122Q9HBG6 1241 aa12.28□□□□□ -0.44
UBE2D3-209ENST00000394804 SLC24A3Q9HC58 644 aa12.28□□□□□ -0.44
UBE2D3-209ENST00000394804 GINS2Q9Y248 185 aa12.28□□□□□ -0.44
UBE2D3-209ENST00000394804 RPTORQ8N122 1335 aa12.28□□□□□ -0.44
UBE2D3-209ENST00000394804 DNALI1O14645 258 aaPredicted RBP12.28□□□□□ -0.44
UBE2D3-209ENST00000394804 PDHA1P08559 390 aa12.28□□□□□ -0.44
UBE2D3-209ENST00000394804 MARK3P27448 753 aa12.28□□□□□ -0.44
UBE2D3-209ENST00000394804 EFNA5P52803 228 aa12.28□□□□□ -0.44
UBE2D3-209ENST00000394804 PDE1BQ01064 536 aa12.28□□□□□ -0.44
UBE2D3-209ENST00000394804 C1QBPQ07021 282 aaKnown RBP12.28□□□□□ -0.44
UBE2D3-209ENST00000394804 NLGN2Q8NFZ4 835 aa12.28□□□□□ -0.44
UBE2D3-209ENST00000394804 VCX3BQ9H321 246 aa12.28□□□□□ -0.44
UBE2D3-209ENST00000394804 SMAPO00193 183 aa12.28□□□□□ -0.44
UBE2D3-209ENST00000394804 CCDC22O60826 627 aa12.28□□□□□ -0.44
UBE2D3-209ENST00000394804 SOX10P56693 466 aa12.28□□□□□ -0.44
UBE2D3-209ENST00000394804 TFDP3Q5H9I0 405 aa12.28□□□□□ -0.44
UBE2D3-209ENST00000394804 EEPD1Q7L9B9 569 aa12.28□□□□□ -0.44
UBE2D3-209ENST00000394804 ACSF2Q96CM8 615 aaPredicted RBP12.28□□□□□ -0.44
UBE2D3-209ENST00000394804 NIF3L1Q9GZT8 377 aa12.28□□□□□ -0.44
UBE2D3-209ENST00000394804 SLC24A2Q9UI40 661 aa12.28□□□□□ -0.44
UBE2D3-209ENST00000394804 HAO1Q9UJM8 370 aa12.28□□□□□ -0.44
UBE2D3-209ENST00000394804 C15orf41Q9Y2V0 281 aa12.28□□□□□ -0.44
UBE2D3-209ENST00000394804 CCDC160A6NGH7 325 aa12.27□□□□□ -0.44
UBE2D3-209ENST00000394804 TOM1L1O75674 476 aa12.27□□□□□ -0.44
UBE2D3-209ENST00000394804 IRX4P78413 519 aa12.27□□□□□ -0.44
UBE2D3-209ENST00000394804 PGM5Q15124 567 aa12.27□□□□□ -0.44
UBE2D3-209ENST00000394804 SGSM1Q2NKQ1 1148 aa12.27□□□□□ -0.44
UBE2D3-209ENST00000394804 TMEM161BQ8NDZ6 487 aa12.27□□□□□ -0.44
UBE2D3-209ENST00000394804 KLF6Q99612 283 aaPredicted RBP12.27□□□□□ -0.44
UBE2D3-209ENST00000394804 WDR35Q9P2L0 1181 aa12.27□□□□□ -0.44
UBE2D3-209ENST00000394804 ACTL7BQ9Y614 415 aa12.27□□□□□ -0.44
UBE2D3-209ENST00000394804 TXNDC9O14530 226 aa12.27□□□□□ -0.45
UBE2D3-209ENST00000394804 MTA2O94776 668 aa12.27□□□□□ -0.45
UBE2D3-209ENST00000394804 BRD2P25440 801 aaKnown RBP12.27□□□□□ -0.45
UBE2D3-209ENST00000394804 CTCFP49711 727 aaPredicted RBP12.27□□□□□ -0.45
UBE2D3-209ENST00000394804 CDH6P55285 790 aa12.27□□□□□ -0.45
UBE2D3-209ENST00000394804 ACTR2P61160 394 aa12.27□□□□□ -0.45
UBE2D3-209ENST00000394804 MTFR1Q15390 333 aa12.27□□□□□ -0.45
UBE2D3-209ENST00000394804 C6orf89Q6UWU4 347 aa12.27□□□□□ -0.45
UBE2D3-209ENST00000394804 SPOCD1Q6ZMY3 1216 aa12.27□□□□□ -0.45
UBE2D3-209ENST00000394804 NLRP9Q7RTR0 991 aa12.27□□□□□ -0.45
UBE2D3-209ENST00000394804 ZC3H18Q86VM9 953 aaKnown RBP12.27□□□□□ -0.45
UBE2D3-209ENST00000394804 KATNAL2Q8IYT4 538 aa12.27□□□□□ -0.45
UBE2D3-209ENST00000394804 ZCCHC9Q8N567 271 aaKnown RBP12.27□□□□□ -0.45
UBE2D3-209ENST00000394804 ATG4CQ96DT6 458 aa12.27□□□□□ -0.45
UBE2D3-209ENST00000394804 PXMP2Q9NR77 195 aa12.27□□□□□ -0.45
UBE2D3-209ENST00000394804 XPO7Q9UIA9 1087 aaKnown RBP12.27□□□□□ -0.45
UBE2D3-209ENST00000394804 SHOC2Q9UQ13 582 aa12.27□□□□□ -0.45
UBE2D3-209ENST00000394804 CHMP2BQ9UQN3 213 aa12.27□□□□□ -0.45
UBE2D3-209ENST00000394804 HEY1Q9Y5J3 304 aa12.27□□□□□ -0.45
UBE2D3-209ENST00000394804 SPECC1L-ADORA2AF8WAN1 911 aa12.27□□□□□ -0.45
UBE2D3-209ENST00000394804 ECHS1P30084 290 aa12.27□□□□□ -0.45
UBE2D3-209ENST00000394804 KCNJ2P63252 427 aa12.27□□□□□ -0.45
UBE2D3-209ENST00000394804 FAM102AQ5T9C2 384 aaPredicted RBP12.27□□□□□ -0.45
UBE2D3-209ENST00000394804 SH3BP5LQ7L8J4 393 aa12.27□□□□□ -0.45
UBE2D3-209ENST00000394804 TRIM50Q86XT4 487 aa12.27□□□□□ -0.45
UBE2D3-209ENST00000394804 SEMA4DQ92854 862 aa12.27□□□□□ -0.45
UBE2D3-209ENST00000394804 TAF1P21675 1872 aa12.26□□□□□ -0.45
UBE2D3-209ENST00000394804 ZMYM2Q9UBW7 1377 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms