RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 ENDOVQ8N8Q3 282 aaKnown RBP10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 IL31RAQ8NI17 732 aa10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 RMDN3Q96TC7 470 aa10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 SLC38A10Q9HBR0 1119 aa10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 PXMP2Q9NR77 195 aa10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 FBXO28Q9NVF7 368 aa10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 ARHGAP28Q9P2N2 729 aa10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 ZFP69BQ9UJL9 534 aa10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 AGO2Q9UKV8 859 aaKnown RBP10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 STRIP2Q9ULQ0 834 aa10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 STYXL1Q9Y6J8 313 aa10.6□□□□□ -0.71
UBE2D3-208ENST00000394803 PIGRP01833 764 aa10.59□□□□□ -0.71
UBE2D3-208ENST00000394803 C4BPAP04003 597 aaKnown RBP10.59□□□□□ -0.71
UBE2D3-208ENST00000394803 PECAM1P16284 738 aaPredicted RBP10.59□□□□□ -0.71
UBE2D3-208ENST00000394803 ATF7P17544 494 aaPredicted RBP10.59□□□□□ -0.71
UBE2D3-208ENST00000394803 CD58P19256 250 aa10.59□□□□□ -0.71
UBE2D3-208ENST00000394803 EIF2AK2P19525 551 aaKnown RBP10.59□□□□□ -0.71
UBE2D3-208ENST00000394803 MRPS35P82673 323 aaKnown RBP10.59□□□□□ -0.71
UBE2D3-208ENST00000394803 MGAT5Q09328 741 aa10.59□□□□□ -0.71
UBE2D3-208ENST00000394803 BLMHQ13867 455 aa10.59□□□□□ -0.71
UBE2D3-208ENST00000394803 CAPRIN2Q6IMN6 1127 aaKnown RBP10.59□□□□□ -0.71
UBE2D3-208ENST00000394803 DNAJC24Q6P3W2 148 aa10.59□□□□□ -0.71
UBE2D3-208ENST00000394803 SPOCD1Q6ZMY3 1216 aa10.59□□□□□ -0.71
UBE2D3-208ENST00000394803 ANO5Q75V66 913 aa10.59□□□□□ -0.71
UBE2D3-208ENST00000394803 PPIL6Q8IXY8 311 aa10.59□□□□□ -0.71
UBE2D3-208ENST00000394803 NIPA2Q8N8Q9 360 aa10.59□□□□□ -0.71
UBE2D3-208ENST00000394803 RBBP8NLQ8NC74 664 aaPredicted RBP10.59□□□□□ -0.71
UBE2D3-208ENST00000394803 TMEM35BQ8NCS4 154 aa10.59□□□□□ -0.71
UBE2D3-208ENST00000394803 PRCCQ92733 491 aaPredicted RBP10.59□□□□□ -0.71
UBE2D3-208ENST00000394803 NAF1Q96HR8 494 aaKnown RBP10.59□□□□□ -0.71
UBE2D3-208ENST00000394803 CGRRF1Q99675 332 aa10.59□□□□□ -0.71
UBE2D3-208ENST00000394803 PDCD2LQ9BRP1 358 aa10.59□□□□□ -0.71
UBE2D3-208ENST00000394803 PI4K2AQ9BTU6 479 aa10.59□□□□□ -0.71
UBE2D3-208ENST00000394803 VPS11Q9H270 941 aa10.59□□□□□ -0.71
UBE2D3-208ENST00000394803 DCLRE1BQ9H816 532 aa10.59□□□□□ -0.71
UBE2D3-208ENST00000394803 TESPA1A2RU30 521 aaPredicted RBP10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 CLGNO14967 610 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 TYROBPO43914 113 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 CCDC22O60826 627 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 SPAG6O75602 509 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 NEBLO76041 1014 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 KRT7P08729 469 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 ACO1P21399 889 aaKnown RBP10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 MMP8P22894 467 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 MARK3P27448 753 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 GJC1P36383 396 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 YWHAEP62258 255 aaKnown RBP10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 SPP2Q13103 211 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 GRM1Q13255 1194 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 LLGL1Q15334 1064 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 CCDC142Q17RM4 750 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 TMEM63BQ5T3F8 832 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 RNASEH2BQ5TBB1 312 aaKnown RBP10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 CHADLQ6NUI6 762 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 DCUN1D2Q6PH85 259 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 TMEM270Q6UE05 265 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 CCDC125Q86Z20 511 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 ZBED8Q8IZ13 594 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 MTMR14Q8NCE2 650 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 PYROXD1Q8WU10 500 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 C10orf82Q8WW14 230 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 APBB2Q92870 758 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 ZNF570Q96NI8 536 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 HERPUD2Q9BSE4 406 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 TRIM55Q9BYV6 548 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 TLE6Q9H808 572 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 STOML1Q9UBI4 398 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 CHKBQ9Y259 395 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 LRRC42Q9Y546 428 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 hCG_1818297A0A087WSY0 165 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 TMEM191CA6NGB0 347 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 SGK1O00141 431 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 SPAG7O75391 227 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 CCNE2O96020 404 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 TMEM191BP0C7N4 346 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 POLR2BP30876 1174 aaKnown RBP10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 RPS6P62753 249 aaKnown RBP10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 PDIA2Q13087 525 aaKnown RBP10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 SURF1Q15526 300 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 OASLQ15646 514 aaKnown RBP10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 HADHQ16836 314 aaKnown RBP10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 TRIM42Q8IWZ5 723 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 MICAL1Q8TDZ2 1067 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 TAAR1Q96RJ0 339 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 NUDCD1Q96RS6 583 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 ZNF341Q9BYN7 854 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 KIAA1683Q9H0B3 1180 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 RBAKQ9NYW8 714 aaPredicted RBP10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 GABBR1Q9UBS5 961 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 DNPEPQ9ULA0 475 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 IKBKGQ9Y6K9 419 aa10.58□□□□□ -0.72
UBE2D3-208ENST00000394803 CNTNAP1P78357 1384 aa10.57□□□□□ -0.72
UBE2D3-208ENST00000394803 IQANK1A0A1B0GTG1 560 aa10.57□□□□□ -0.72
UBE2D3-208ENST00000394803 CLRN2A0PK11 232 aa10.57□□□□□ -0.72
UBE2D3-208ENST00000394803 SMNDC1O75940 238 aaKnown RBP eCLIP10.57□□□□□ -0.723e-7■■□□□ 11.4
UBE2D3-208ENST00000394803 TGDSO95455 350 aa10.57□□□□□ -0.72
UBE2D3-208ENST00000394803 GNAZP19086 355 aa10.57□□□□□ -0.72
UBE2D3-208ENST00000394803 GCAP28676 217 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms