RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 TM7SF2O76062 418 aa13.16□□□□□ -0.3
SLC28A1-203ENST00000394573 GJB7Q6PEY0 223 aa13.16□□□□□ -0.3
SLC28A1-203ENST00000394573 TRIML2Q8N7C3 387 aa13.16□□□□□ -0.3
SLC28A1-203ENST00000394573 MAML1Q92585 1016 aa13.16□□□□□ -0.3
SLC28A1-203ENST00000394573 BABAM1Q9NWV8 329 aa13.16□□□□□ -0.3
SLC28A1-203ENST00000394573 RABGAP1Q9Y3P9 1069 aa13.16□□□□□ -0.3
SLC28A1-203ENST00000394573 PFDN6O15212 129 aa13.16□□□□□ -0.3
SLC28A1-203ENST00000394573 FKBP6O75344 327 aa13.16□□□□□ -0.3
SLC28A1-203ENST00000394573 MYL2P10916 166 aa13.16□□□□□ -0.3
SLC28A1-203ENST00000394573 ARL4CP56559 192 aa13.16□□□□□ -0.3
SLC28A1-203ENST00000394573 PEX3P56589 373 aa13.16□□□□□ -0.3
SLC28A1-203ENST00000394573 MRPS9P82933 396 aaKnown RBP13.16□□□□□ -0.3
SLC28A1-203ENST00000394573 MAP3K21Q5TCX8 1036 aa13.16□□□□□ -0.3
SLC28A1-203ENST00000394573 GRAMD2AQ8IUY3 354 aa13.16□□□□□ -0.3
SLC28A1-203ENST00000394573 C1orf54Q8WWF1 131 aa13.16□□□□□ -0.3
SLC28A1-203ENST00000394573 CAPSLQ8WWF8 208 aa13.16□□□□□ -0.3
SLC28A1-203ENST00000394573 PSPC1Q8WXF1 523 aaKnown RBP13.16□□□□□ -0.3
SLC28A1-203ENST00000394573 SYN2Q92777 582 aaPredicted RBP13.16□□□□□ -0.3
SLC28A1-203ENST00000394573 ITPKCQ96DU7 683 aa13.16□□□□□ -0.3
SLC28A1-203ENST00000394573 TRIM55Q9BYV6 548 aa13.16□□□□□ -0.3
SLC28A1-203ENST00000394573 RNF38Q9H0F5 515 aa13.16□□□□□ -0.3
SLC28A1-203ENST00000394573 RIC8AQ9NPQ8 531 aa13.16□□□□□ -0.3
SLC28A1-203ENST00000394573 CNGB3Q9NQW8 809 aa13.16□□□□□ -0.3
SLC28A1-203ENST00000394573 SEPT11Q9NVA2 429 aaKnown RBP13.16□□□□□ -0.3
SLC28A1-203ENST00000394573 ZBTB1Q9Y2K1 713 aa13.16□□□□□ -0.3
SLC28A1-203ENST00000394573 LRRC37A3O60309 1634 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 FAM237BA0A1B0GVD1 139 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 TMEM114B3SHH9 223 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 PODXLO00592 558 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 KRT75O95678 551 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 PCCAP05165 728 aaPredicted RBP13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 CHRNA3P32297 505 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 SLC25A3Q00325 362 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 CNGA3Q16281 694 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 ZNF568Q3ZCX4 644 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 TMCO4Q5TGY1 634 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 PRR23CQ6ZRP0 262 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 MFSD6Q6ZSS7 791 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 CPNE8Q86YQ8 564 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 SPATA5Q8NB90 893 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 HSPH1Q92598 858 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 ARHGEF26Q96DR7 871 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 SHCBP1LQ9BZQ2 653 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 NCKIPSDQ9NZQ3 722 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 KIAA1257Q9ULG3 409 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 FLT4P35916 1363 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 BTNL10A8MVZ5 291 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 AP1G1O43747 822 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 UGT1A9O60656 530 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 MAGEC1O60732 1142 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 TMCC2O75069 709 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 CAMTA2O94983 1202 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 CRTAMO95727 393 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 LDHBP07195 334 aaKnown RBP13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 CPA3P15088 417 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 UGT1A6P19224 532 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 UGT1A1P22309 533 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 UGT1A4P22310 534 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 UGT1A3P35503 534 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 UGT1A5P35504 534 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 CLK3P49761 638 aaKnown RBP13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 CDK16Q00536 496 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 SNAPC2Q13487 334 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 RASGRF1Q13972 1273 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 NIPAL1Q6NVV3 410 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 CNNM4Q6P4Q7 775 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 TRABD2AQ86V40 505 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 TTC39CQ8N584 583 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 C4orf32Q8N8J7 132 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 DCUN1D1Q96GG9 259 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 HERC2P3Q9BVR0 1158 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 RNF26Q9BY78 433 aaPredicted RBP13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 UGT1A7Q9HAW7 530 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 UGT1A10Q9HAW8 530 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 UGT1A8Q9HAW9 530 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 EPB41L4AQ9HCS5 686 aaPredicted RBP13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 PCDH12Q9NPG4 1184 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 LRRC4BQ9NT99 713 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 SCHIP1Q9P0W5 487 aaPredicted RBP13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 PPARGC1AQ9UBK2 798 aaKnown RBP13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 TTC7AQ9ULT0 858 aaPredicted RBP13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 ARIH1Q9Y4X5 557 aaPredicted RBP13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 AP4B1Q9Y6B7 739 aa13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 DDX60Q8IY21 1712 aaKnown RBP13.15□□□□□ -0.3
SLC28A1-203ENST00000394573 EXOC1LA0A1B0GW35 172 aa13.15□□□□□ -0.31
SLC28A1-203ENST00000394573 KRBA1A5PL33 1030 aa13.15□□□□□ -0.31
SLC28A1-203ENST00000394573 PRKAB2O43741 272 aa13.15□□□□□ -0.31
SLC28A1-203ENST00000394573 TNFAIP8O95379 198 aa13.15□□□□□ -0.31
SLC28A1-203ENST00000394573 DLATP10515 647 aaKnown RBP13.15□□□□□ -0.31
SLC28A1-203ENST00000394573 SCNN1DP51172 638 aa13.15□□□□□ -0.31
SLC28A1-203ENST00000394573 ITGA8P53708 1063 aa13.15□□□□□ -0.31
SLC28A1-203ENST00000394573 NR1H2P55055 460 aa13.15□□□□□ -0.31
SLC28A1-203ENST00000394573 KCNQ4P56696 695 aa13.15□□□□□ -0.31
SLC28A1-203ENST00000394573 ITGADQ13349 1161 aa13.15□□□□□ -0.31
SLC28A1-203ENST00000394573 PPP2R5EQ16537 467 aa13.15□□□□□ -0.31
SLC28A1-203ENST00000394573 CARTPTQ16568 116 aa13.15□□□□□ -0.31
SLC28A1-203ENST00000394573 RSPH3Q86UC2 560 aa13.15□□□□□ -0.31
SLC28A1-203ENST00000394573 DEPDC4Q8N2C3 294 aa13.15□□□□□ -0.31
SLC28A1-203ENST00000394573 EME1Q96AY2 570 aa13.15□□□□□ -0.31
SLC28A1-203ENST00000394573 TAMM41Q96BW9 452 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms