RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 ATAD1Q8NBU5 361 aa18.94■□□□□ 0.62
SNRPA1-202ENST00000394082 CSGALNACT1Q8TDX6 532 aa18.94■□□□□ 0.62
SNRPA1-202ENST00000394082 HVCN1Q96D96 273 aa18.94■□□□□ 0.62
SNRPA1-202ENST00000394082 MKNK1Q9BUB5 465 aa18.94■□□□□ 0.62
SNRPA1-202ENST00000394082 NCANO14594 1321 aa18.94■□□□□ 0.62
SNRPA1-202ENST00000394082 PPEF2O14830 753 aa18.93■□□□□ 0.62
SNRPA1-202ENST00000394082 NFICP08651 508 aa18.93■□□□□ 0.62
SNRPA1-202ENST00000394082 KARSQ15046 597 aaKnown RBP18.93■□□□□ 0.62
SNRPA1-202ENST00000394082 ARHGAP29Q52LW3 1261 aa18.93■□□□□ 0.62
SNRPA1-202ENST00000394082 TSSK4Q6SA08 328 aa18.93■□□□□ 0.62
SNRPA1-202ENST00000394082 RALGPS2Q86X27 583 aaPredicted RBP18.93■□□□□ 0.62
SNRPA1-202ENST00000394082 SPEM1Q8N4L4 309 aa18.93■□□□□ 0.62
SNRPA1-202ENST00000394082 KRI1Q8N9T8 703 aaKnown RBP18.93■□□□□ 0.62
SNRPA1-202ENST00000394082 RSPRY1Q96DX4 576 aa18.93■□□□□ 0.62
SNRPA1-202ENST00000394082 ZCWPW1Q9H0M4 648 aa18.93■□□□□ 0.62
SNRPA1-202ENST00000394082 UPF2Q9HAU5 1272 aaKnown RBP18.93■□□□□ 0.62
SNRPA1-202ENST00000394082 SLC27A5Q9Y2P5 690 aa18.93■□□□□ 0.62
SNRPA1-202ENST00000394082 MYBPHLA2RUH7 354 aa18.92■□□□□ 0.62
SNRPA1-202ENST00000394082 PRR5-ARHGAP8B1AHC4 643 aa18.92■□□□□ 0.62
SNRPA1-202ENST00000394082 CCNE1P24864 410 aa18.92■□□□□ 0.62
SNRPA1-202ENST00000394082 ARHGAP8P85298 464 aa18.92■□□□□ 0.62
SNRPA1-202ENST00000394082 PLCB2Q00722 1185 aa18.92■□□□□ 0.62
SNRPA1-202ENST00000394082 LRRC32Q14392 662 aa18.92■□□□□ 0.62
SNRPA1-202ENST00000394082 DHX8Q14562 1220 aaKnown RBP18.92■□□□□ 0.62
SNRPA1-202ENST00000394082 POSTNQ15063 836 aa18.92■□□□□ 0.62
SNRPA1-202ENST00000394082 SF3A1Q15459 793 aaKnown RBP18.92■□□□□ 0.62
SNRPA1-202ENST00000394082 ARHGAP15Q53QZ3 475 aa18.92■□□□□ 0.62
SNRPA1-202ENST00000394082 ADALQ6DHV7 355 aa18.92■□□□□ 0.62
SNRPA1-202ENST00000394082 ZNF720Q7Z2F6 126 aa18.92■□□□□ 0.62
SNRPA1-202ENST00000394082 OR10T2Q8NGX3 314 aa18.92■□□□□ 0.62
SNRPA1-202ENST00000394082 RASSF8Q8NHQ8 419 aa18.92■□□□□ 0.62
SNRPA1-202ENST00000394082 SPPL2BQ8TCT7 592 aa18.92■□□□□ 0.62
SNRPA1-202ENST00000394082 FAM212AQ96EL1 285 aa18.92■□□□□ 0.62
SNRPA1-202ENST00000394082 SEL1LQ9UBV2 794 aa18.92■□□□□ 0.62
SNRPA1-202ENST00000394082 STK17AQ9UEE5 414 aa18.92■□□□□ 0.62
SNRPA1-202ENST00000394082 AGO2Q9UKV8 859 aaKnown RBP18.92■□□□□ 0.62
SNRPA1-202ENST00000394082 TSC2P49815 1807 aa18.92■□□□□ 0.62
SNRPA1-202ENST00000394082 NUP210Q8TEM1 1887 aaPredicted RBP18.92■□□□□ 0.62
SNRPA1-202ENST00000394082 ANK1P16157 1881 aa18.91■□□□□ 0.62
SNRPA1-202ENST00000394082 SOBPA7XYQ1 873 aa18.91■□□□□ 0.62
SNRPA1-202ENST00000394082 ANKRD63C9JTQ0 380 aa18.91■□□□□ 0.62
SNRPA1-202ENST00000394082 PPP1R37O75864 691 aa18.91■□□□□ 0.62
SNRPA1-202ENST00000394082 CDC25CP30307 473 aa18.91■□□□□ 0.62
SNRPA1-202ENST00000394082 NMT1P30419 496 aaKnown RBP18.91■□□□□ 0.62
SNRPA1-202ENST00000394082 CXCL12P48061 93 aa18.91■□□□□ 0.62
SNRPA1-202ENST00000394082 ACOT2P49753 483 aa18.91■□□□□ 0.62
SNRPA1-202ENST00000394082 TAF6P49848 677 aa18.91■□□□□ 0.62
SNRPA1-202ENST00000394082 LMNB2Q03252 620 aa18.91■□□□□ 0.62
SNRPA1-202ENST00000394082 GRIN1Q05586 938 aa18.91■□□□□ 0.62
SNRPA1-202ENST00000394082 VEPH1Q14D04 833 aa18.91■□□□□ 0.62
SNRPA1-202ENST00000394082 DGKKQ5KSL6 1271 aa18.91■□□□□ 0.62
SNRPA1-202ENST00000394082 METTL23Q86XA0 190 aa18.91■□□□□ 0.62
SNRPA1-202ENST00000394082 THEM5Q8N1Q8 247 aa18.91■□□□□ 0.62
SNRPA1-202ENST00000394082 SYNPOQ8N3V7 929 aa18.91■□□□□ 0.62
SNRPA1-202ENST00000394082 TMEM209Q96SK2 561 aa18.91■□□□□ 0.62
SNRPA1-202ENST00000394082 STRA6Q9BX79 667 aa18.91■□□□□ 0.62
SNRPA1-202ENST00000394082 ATXN3LQ9H3M9 355 aa18.91■□□□□ 0.62
SNRPA1-202ENST00000394082 ZHX3Q9H4I2 956 aa18.91■□□□□ 0.62
SNRPA1-202ENST00000394082 TASP1Q9H6P5 420 aa18.91■□□□□ 0.62
SNRPA1-202ENST00000394082 DPYSL4O14531 572 aa18.9■□□□□ 0.62
SNRPA1-202ENST00000394082 CYB561D2O14569 222 aa18.9■□□□□ 0.62
SNRPA1-202ENST00000394082 LRP3O75074 770 aa18.9■□□□□ 0.62
SNRPA1-202ENST00000394082 IL18RAPO95256 599 aa18.9■□□□□ 0.62
SNRPA1-202ENST00000394082 TGM1P22735 817 aa18.9■□□□□ 0.62
SNRPA1-202ENST00000394082 GABRR2P28476 465 aa18.9■□□□□ 0.62
SNRPA1-202ENST00000394082 HOXA6P31267 233 aa18.9■□□□□ 0.62
SNRPA1-202ENST00000394082 CTHP32929 405 aa18.9■□□□□ 0.62
SNRPA1-202ENST00000394082 CNR2P34972 360 aa18.9■□□□□ 0.62
SNRPA1-202ENST00000394082 ZC2HC1CQ53FD0 456 aaPredicted RBP18.9■□□□□ 0.62
SNRPA1-202ENST00000394082 TTC9BQ8N6N2 239 aa18.9■□□□□ 0.62
SNRPA1-202ENST00000394082 IL21Q9HBE4 155 aa18.9■□□□□ 0.62
SNRPA1-202ENST00000394082 DPP3Q9NY33 737 aa18.9■□□□□ 0.62
SNRPA1-202ENST00000394082 GMEB2Q9UKD1 530 aa18.9■□□□□ 0.62
SNRPA1-202ENST00000394082 SCN1AP35498 2009 aa18.9■□□□□ 0.62
SNRPA1-202ENST00000394082 SPECC1L-ADORA2AF8WAN1 911 aa18.89■□□□□ 0.61
SNRPA1-202ENST00000394082 ATF6P18850 670 aa18.89■□□□□ 0.61
SNRPA1-202ENST00000394082 PNPLA4P41247 253 aa18.89■□□□□ 0.61
SNRPA1-202ENST00000394082 KPNA1P52294 538 aaPredicted RBP18.89■□□□□ 0.61
SNRPA1-202ENST00000394082 GAS6Q14393 721 aa18.89■□□□□ 0.61
SNRPA1-202ENST00000394082 RSPO4Q2I0M5 234 aaPredicted RBP18.89■□□□□ 0.61
SNRPA1-202ENST00000394082 SV2CQ496J9 727 aa18.89■□□□□ 0.61
SNRPA1-202ENST00000394082 SLC39A12Q504Y0 691 aa18.89■□□□□ 0.61
SNRPA1-202ENST00000394082 STXBP5Q5T5C0 1151 aa18.89■□□□□ 0.61
SNRPA1-202ENST00000394082 GPR158Q5T848 1215 aa18.89■□□□□ 0.61
SNRPA1-202ENST00000394082 LAIR1Q6GTX8 287 aa18.89■□□□□ 0.61
SNRPA1-202ENST00000394082 CRELD2Q6UXH1 353 aaPredicted RBP18.89■□□□□ 0.61
SNRPA1-202ENST00000394082 BPIFB1Q8TDL5 484 aa18.89■□□□□ 0.61
SNRPA1-202ENST00000394082 LRRC3BQ96PB8 259 aa18.89■□□□□ 0.61
SNRPA1-202ENST00000394082 CCDC39Q9UFE4 941 aa18.89■□□□□ 0.61
SNRPA1-202ENST00000394082 RAB23Q9ULC3 237 aa18.89■□□□□ 0.61
SNRPA1-202ENST00000394082 MORC2Q9Y6X9 1032 aaPredicted RBP18.89■□□□□ 0.61
SNRPA1-202ENST00000394082 MED19A0JLT2 244 aaPredicted RBP18.88■□□□□ 0.61
SNRPA1-202ENST00000394082 KPNA7A9QM74 516 aa18.88■□□□□ 0.61
SNRPA1-202ENST00000394082 GAP43P17677 238 aa18.88■□□□□ 0.61
SNRPA1-202ENST00000394082 PDCP20941 246 aa18.88■□□□□ 0.61
SNRPA1-202ENST00000394082 ADSSP30520 456 aa18.88■□□□□ 0.61
SNRPA1-202ENST00000394082 CUL4AQ13619 759 aa18.88■□□□□ 0.61
SNRPA1-202ENST00000394082 PTPAQ15257 358 aa18.88■□□□□ 0.61
SNRPA1-202ENST00000394082 MGAT5BQ3V5L5 792 aa18.88■□□□□ 0.61
SNRPA1-202ENST00000394082 DCP1BQ8IZD4 617 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms