RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 POSTNQ15063 836 aa19.72■□□□□ 0.75
PDLIM7-205ENST00000393551 WSCD1Q658N2 575 aa19.72■□□□□ 0.75
PDLIM7-205ENST00000393551 DNAJB7Q7Z6W7 309 aaPredicted RBP19.72■□□□□ 0.75
PDLIM7-205ENST00000393551 PDILTQ8N807 584 aa19.72■□□□□ 0.75
PDLIM7-205ENST00000393551 GLIS3Q8NEA6 775 aa19.72■□□□□ 0.75
PDLIM7-205ENST00000393551 CXorf38Q8TB03 319 aa19.72■□□□□ 0.75
PDLIM7-205ENST00000393551 DNASE1L2Q92874 299 aa19.72■□□□□ 0.75
PDLIM7-205ENST00000393551 ACCSQ96QU6 501 aa19.72■□□□□ 0.75
PDLIM7-205ENST00000393551 PYM1Q9BRP8 204 aaKnown RBP19.72■□□□□ 0.75
PDLIM7-205ENST00000393551 FAM213AQ9BRX8 229 aa19.72■□□□□ 0.75
PDLIM7-205ENST00000393551 TRMT61BQ9BVS5 477 aaKnown RBP19.72■□□□□ 0.75
PDLIM7-205ENST00000393551 DENND4CQ5VZ89 1909 aa19.71■□□□□ 0.75
PDLIM7-205ENST00000393551 ARNTLO00327 626 aa19.71■□□□□ 0.75
PDLIM7-205ENST00000393551 IL18RAPO95256 599 aa19.71■□□□□ 0.75
PDLIM7-205ENST00000393551 PSMC3P17980 439 aa19.71■□□□□ 0.75
PDLIM7-205ENST00000393551 ATF6P18850 670 aa19.71■□□□□ 0.75
PDLIM7-205ENST00000393551 ALDH1A3P47895 512 aa19.71■□□□□ 0.75
PDLIM7-205ENST00000393551 TAF6P49848 677 aa19.71■□□□□ 0.75
PDLIM7-205ENST00000393551 PLD1Q13393 1074 aa19.71■□□□□ 0.75
PDLIM7-205ENST00000393551 E2F4Q16254 413 aa19.71■□□□□ 0.75
PDLIM7-205ENST00000393551 SLC39A12Q504Y0 691 aa19.71■□□□□ 0.75
PDLIM7-205ENST00000393551 GPIHBP1Q8IV16 184 aa19.71■□□□□ 0.75
PDLIM7-205ENST00000393551 BRSK2Q8IWQ3 736 aa19.71■□□□□ 0.75
PDLIM7-205ENST00000393551 ADSSL1Q8N142 457 aa19.71■□□□□ 0.75
PDLIM7-205ENST00000393551 HPS3Q969F9 1004 aa19.71■□□□□ 0.75
PDLIM7-205ENST00000393551 PSMG2Q969U7 264 aa19.71■□□□□ 0.75
PDLIM7-205ENST00000393551 LRRC3BQ96PB8 259 aa19.71■□□□□ 0.75
PDLIM7-205ENST00000393551 CBWD1Q9BRT8 395 aa19.71■□□□□ 0.75
PDLIM7-205ENST00000393551 BRD9Q9H8M2 597 aa19.71■□□□□ 0.75
PDLIM7-205ENST00000393551 PANK4Q9NVE7 773 aa19.71■□□□□ 0.75
PDLIM7-205ENST00000393551 TFIP11Q9UBB9 837 aaKnown RBP19.71■□□□□ 0.75
PDLIM7-205ENST00000393551 HSFX1Q9UBD0 423 aa19.71■□□□□ 0.75
PDLIM7-205ENST00000393551 PCDHB13Q9Y5F0 798 aa19.71■□□□□ 0.75
PDLIM7-205ENST00000393551 NUP210Q8TEM1 1887 aaPredicted RBP19.71■□□□□ 0.75
PDLIM7-205ENST00000393551 GOLGA8IPA6NC78 632 aa19.7■□□□□ 0.74
PDLIM7-205ENST00000393551 GOLGA8JA6NMD2 632 aa19.7■□□□□ 0.74
PDLIM7-205ENST00000393551 KPNA7A9QM74 516 aa19.7■□□□□ 0.74
PDLIM7-205ENST00000393551 PRPF6O94906 941 aaKnown RBP19.7■□□□□ 0.74
PDLIM7-205ENST00000393551 GDI1P31150 447 aa19.7■□□□□ 0.74
PDLIM7-205ENST00000393551 ARMCX5Q6P1M9 558 aa19.7■□□□□ 0.74
PDLIM7-205ENST00000393551 NT5DC4Q86YG4 428 aa19.7■□□□□ 0.74
PDLIM7-205ENST00000393551 MFSD6LQ8IWD5 586 aa19.7■□□□□ 0.74
PDLIM7-205ENST00000393551 C1orf127Q8N9H9 656 aa19.7■□□□□ 0.74
PDLIM7-205ENST00000393551 LPIN3Q9BQK8 851 aa19.7■□□□□ 0.74
PDLIM7-205ENST00000393551 BCO2Q9BYV7 579 aa19.7■□□□□ 0.74
PDLIM7-205ENST00000393551 TRPV5Q9NQA5 729 aa19.7■□□□□ 0.74
PDLIM7-205ENST00000393551 DSEQ9UL01 958 aa19.7■□□□□ 0.74
PDLIM7-205ENST00000393551 EXOC7Q9UPT5 735 aa19.7■□□□□ 0.74
PDLIM7-205ENST00000393551 HEPACAM2A8MVW5 462 aa19.69■□□□□ 0.74
PDLIM7-205ENST00000393551 GARTP22102 1010 aa19.69■□□□□ 0.74
PDLIM7-205ENST00000393551 HOXD13P35453 343 aa19.69■□□□□ 0.74
PDLIM7-205ENST00000393551 STK38Q15208 465 aa19.69■□□□□ 0.74
PDLIM7-205ENST00000393551 ZNF852Q6ZMS4 543 aa19.69■□□□□ 0.74
PDLIM7-205ENST00000393551 IRF7Q92985 503 aa19.69■□□□□ 0.74
PDLIM7-205ENST00000393551 NELL2Q99435 816 aa19.69■□□□□ 0.74
PDLIM7-205ENST00000393551 GPR88Q9GZN0 384 aa19.69■□□□□ 0.74
PDLIM7-205ENST00000393551 PCIF1Q9H4Z3 704 aa19.69■□□□□ 0.74
PDLIM7-205ENST00000393551 IL21Q9HBE4 155 aa19.69■□□□□ 0.74
PDLIM7-205ENST00000393551 TMLHEQ9NVH6 421 aa19.69■□□□□ 0.74
PDLIM7-205ENST00000393551 KBTBD4Q9NVX7 518 aa19.69■□□□□ 0.74
PDLIM7-205ENST00000393551 SPATA6Q9NWH7 488 aaPredicted RBP19.69■□□□□ 0.74
PDLIM7-205ENST00000393551 ASB3Q9Y575 518 aa19.69■□□□□ 0.74
PDLIM7-205ENST00000393551 SPTLC2O15270 562 aa19.68■□□□□ 0.74
PDLIM7-205ENST00000393551 PPP6R2O75170 966 aa19.68■□□□□ 0.74
PDLIM7-205ENST00000393551 ITGB3P05106 788 aa19.68■□□□□ 0.74
PDLIM7-205ENST00000393551 POLR2BP30876 1174 aaKnown RBP19.68■□□□□ 0.74
PDLIM7-205ENST00000393551 TFAMQ00059 246 aaKnown RBP19.68■□□□□ 0.74
PDLIM7-205ENST00000393551 SHC4Q6S5L8 630 aa19.68■□□□□ 0.74
PDLIM7-205ENST00000393551 ARID3BQ8IVW6 561 aaPredicted RBP19.68■□□□□ 0.74
PDLIM7-205ENST00000393551 DEPDC1BQ8WUY9 529 aa19.68■□□□□ 0.74
PDLIM7-205ENST00000393551 SNX21Q969T3 373 aa19.68■□□□□ 0.74
PDLIM7-205ENST00000393551 SEPT5Q99719 369 aaPredicted RBP19.68■□□□□ 0.74
PDLIM7-205ENST00000393551 SLITRK6Q9H5Y7 841 aa19.68■□□□□ 0.74
PDLIM7-205ENST00000393551 PDE11AQ9HCR9 933 aa19.68■□□□□ 0.74
PDLIM7-205ENST00000393551 OBSL1O75147 1896 aa19.68■□□□□ 0.74
PDLIM7-205ENST00000393551 EXTL3O43909 919 aa19.67■□□□□ 0.74
PDLIM7-205ENST00000393551 LMNAP02545 664 aaKnown RBP19.67■□□□□ 0.74
PDLIM7-205ENST00000393551 GABRR2P28476 465 aa19.67■□□□□ 0.74
PDLIM7-205ENST00000393551 RPS9P46781 194 aaKnown RBP19.67■□□□□ 0.74
PDLIM7-205ENST00000393551 FCHO2Q0JRZ9 810 aa19.67■□□□□ 0.74
PDLIM7-205ENST00000393551 ALCAMQ13740 583 aa19.67■□□□□ 0.74
PDLIM7-205ENST00000393551 MGAT5BQ3V5L5 792 aa19.67■□□□□ 0.74
PDLIM7-205ENST00000393551 SV2CQ496J9 727 aa19.67■□□□□ 0.74
PDLIM7-205ENST00000393551 METTL23Q86XA0 190 aa19.67■□□□□ 0.74
PDLIM7-205ENST00000393551 SYCP3Q8IZU3 236 aa19.67■□□□□ 0.74
PDLIM7-205ENST00000393551 PDCL2Q8N4E4 241 aa19.67■□□□□ 0.74
PDLIM7-205ENST00000393551 TNMDQ9H2S6 317 aa19.67■□□□□ 0.74
PDLIM7-205ENST00000393551 ATXN3LQ9H3M9 355 aa19.67■□□□□ 0.74
PDLIM7-205ENST00000393551 SEMA4AQ9H3S1 761 aa19.67■□□□□ 0.74
PDLIM7-205ENST00000393551 RBAKQ9NYW8 714 aaPredicted RBP19.67■□□□□ 0.74
PDLIM7-205ENST00000393551 SIX4Q9UIU6 781 aa19.67■□□□□ 0.74
PDLIM7-205ENST00000393551 FBXO4Q9UKT5 387 aa19.67■□□□□ 0.74
PDLIM7-205ENST00000393551 NDRG2Q9UN36 371 aaKnown RBP19.67■□□□□ 0.74
PDLIM7-205ENST00000393551 L1RE1Q9UN81 338 aa19.67■□□□□ 0.74
PDLIM7-205ENST00000393551 AGAP1Q9UPQ3 857 aa19.67■□□□□ 0.74
PDLIM7-205ENST00000393551 PTPRJQ12913 1337 aa19.67■□□□□ 0.74
PDLIM7-205ENST00000393551 KIF26AQ9ULI4 1882 aaPredicted RBP19.67■□□□□ 0.74
PDLIM7-205ENST00000393551 ZNF263O14978 683 aa19.66■□□□□ 0.74
PDLIM7-205ENST00000393551 LDHAP00338 332 aaKnown RBP19.66■□□□□ 0.74
PDLIM7-205ENST00000393551 HAPLN1P10915 354 aaPredicted RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms