RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 PFDN1O60925 122 aa17.23■□□□□ 0.35
PHTF1-205ENST00000393357 NDUFB10O96000 172 aa17.23■□□□□ 0.35
PHTF1-205ENST00000393357 GH2P01242 217 aa17.23■□□□□ 0.35
PHTF1-205ENST00000393357 MT-ND3P03897 115 aa17.23■□□□□ 0.35
PHTF1-205ENST00000393357 LYNP07948 512 aa17.23■□□□□ 0.35
PHTF1-205ENST00000393357 RASA2Q15283 850 aa17.23■□□□□ 0.35
PHTF1-205ENST00000393357 CYP1B1Q16678 543 aa17.23■□□□□ 0.35
PHTF1-205ENST00000393357 WDR72Q3MJ13 1102 aa17.23■□□□□ 0.35
PHTF1-205ENST00000393357 WASHC2DQ5SRD0 308 aa17.23■□□□□ 0.35
PHTF1-205ENST00000393357 CLEC4GQ6UXB4 293 aa17.23■□□□□ 0.35
PHTF1-205ENST00000393357 GSTCDQ8NEC7 633 aa17.23■□□□□ 0.35
PHTF1-205ENST00000393357 HSD17B14Q9BPX1 270 aa17.23■□□□□ 0.35
PHTF1-205ENST00000393357 LARSQ9P2J5 1176 aaKnown RBP17.23■□□□□ 0.35
PHTF1-205ENST00000393357 PPM1HQ9ULR3 514 aa17.23■□□□□ 0.35
PHTF1-205ENST00000393357 TOGARAM1Q9Y4F4 1720 aa17.23■□□□□ 0.35
PHTF1-205ENST00000393357 LIN7AO14910 233 aaPredicted RBP17.23■□□□□ 0.35
PHTF1-205ENST00000393357 GRAPQ13588 217 aa17.23■□□□□ 0.35
PHTF1-205ENST00000393357 UBAP2LQ14157 1087 aaKnown RBP17.23■□□□□ 0.35
PHTF1-205ENST00000393357 CLUL1Q15846 466 aa17.23■□□□□ 0.35
PHTF1-205ENST00000393357 TBC1D25Q3MII6 688 aa17.23■□□□□ 0.35
PHTF1-205ENST00000393357 PPP6R3Q5H9R7 873 aaPredicted RBP17.23■□□□□ 0.35
PHTF1-205ENST00000393357 RASSF3Q86WH2 238 aa17.23■□□□□ 0.35
PHTF1-205ENST00000393357 GRAPLQ8TC17 118 aaPredicted RBP17.23■□□□□ 0.35
PHTF1-205ENST00000393357 FIZ1Q96SL8 496 aa17.23■□□□□ 0.35
PHTF1-205ENST00000393357 EBF3Q9H4W6 596 aa17.23■□□□□ 0.35
PHTF1-205ENST00000393357 PREBQ9HCU5 417 aa17.23■□□□□ 0.35
PHTF1-205ENST00000393357 UBR2Q8IWV8 1755 aa17.23■□□□□ 0.35
PHTF1-205ENST00000393357 CYP3A7-CYP3A51PA0A087WV96 503 aa17.23■□□□□ 0.35
PHTF1-205ENST00000393357 PIK3R2O00459 728 aa17.23■□□□□ 0.35
PHTF1-205ENST00000393357 SKIV2L2P42285 1042 aaKnown RBP17.23■□□□□ 0.35
PHTF1-205ENST00000393357 SLC25A3Q00325 362 aa17.23■□□□□ 0.35
PHTF1-205ENST00000393357 CNPY1Q3B7I2 92 aa17.23■□□□□ 0.35
PHTF1-205ENST00000393357 GRAMD1BQ3KR37 738 aa17.23■□□□□ 0.35
PHTF1-205ENST00000393357 ACAD10Q6JQN1 1059 aa17.23■□□□□ 0.35
PHTF1-205ENST00000393357 DCUN1D2Q6PH85 259 aa17.23■□□□□ 0.35
PHTF1-205ENST00000393357 PIP4K2CQ8TBX8 421 aa17.23■□□□□ 0.35
PHTF1-205ENST00000393357 RBM41Q96IZ5 413 aaKnown RBP17.23■□□□□ 0.35
PHTF1-205ENST00000393357 PCSK1NQ9UHG2 260 aa17.23■□□□□ 0.35
PHTF1-205ENST00000393357 MYH11P35749 1972 aa17.23■□□□□ 0.35
PHTF1-205ENST00000393357 F8VP50 259 aa17.22■□□□□ 0.35
PHTF1-205ENST00000393357 PIK3CDO00329 1044 aa17.22■□□□□ 0.35
PHTF1-205ENST00000393357 SNHG28P0DPA3 235 aa17.22■□□□□ 0.35
PHTF1-205ENST00000393357 TMPRSS15P98073 1019 aa17.22■□□□□ 0.35
PHTF1-205ENST00000393357 C1orf220Q5T0J3 134 aa17.22■□□□□ 0.35
PHTF1-205ENST00000393357 RIPOR1Q6ZS17 1223 aa17.22■□□□□ 0.35
PHTF1-205ENST00000393357 MIER3Q7Z3K6 550 aa17.22■□□□□ 0.35
PHTF1-205ENST00000393357 FBXO36Q8NEA4 188 aa17.22■□□□□ 0.35
PHTF1-205ENST00000393357 NACC1Q96RE7 527 aa17.22■□□□□ 0.35
PHTF1-205ENST00000393357 SYNCQ9H7C4 482 aa17.22■□□□□ 0.35
PHTF1-205ENST00000393357 FBXO28Q9NVF7 368 aa17.22■□□□□ 0.35
PHTF1-205ENST00000393357 LMCD1Q9NZU5 365 aa17.22■□□□□ 0.35
PHTF1-205ENST00000393357 TCRBV7S3A2A0A539 114 aa17.22■□□□□ 0.35
PHTF1-205ENST00000393357 MAGEA13PA6NCF6 341 aa17.22■□□□□ 0.35
PHTF1-205ENST00000393357 ATP2A1O14983 1001 aa17.22■□□□□ 0.35
PHTF1-205ENST00000393357 ACOT2P49753 483 aa17.22■□□□□ 0.35
PHTF1-205ENST00000393357 ACVR2BQ13705 512 aa17.22■□□□□ 0.35
PHTF1-205ENST00000393357 CDC42EP5Q6NZY7 148 aa17.22■□□□□ 0.35
PHTF1-205ENST00000393357 RSPH3Q86UC2 560 aa17.22■□□□□ 0.35
PHTF1-205ENST00000393357 RBM15BQ8NDT2 890 aaKnown RBP17.22■□□□□ 0.35
PHTF1-205ENST00000393357 FAM20AQ96MK3 541 aa17.22■□□□□ 0.35
PHTF1-205ENST00000393357 ACSS2Q9NR19 701 aa17.22■□□□□ 0.35
PHTF1-205ENST00000393357 IVNS1ABPQ9Y6Y0 642 aa17.22■□□□□ 0.35
PHTF1-205ENST00000393357 ROBO3Q96MS0 1386 aa17.22■□□□□ 0.35
PHTF1-205ENST00000393357 MYCLP12524 364 aaPredicted RBP17.21■□□□□ 0.35
PHTF1-205ENST00000393357 HIF1AQ16665 826 aa17.21■□□□□ 0.35
PHTF1-205ENST00000393357 BMT2Q1RMZ1 405 aa17.21■□□□□ 0.35
PHTF1-205ENST00000393357 FNBP1LQ5T0N5 605 aa17.21■□□□□ 0.35
PHTF1-205ENST00000393357 SCARA3Q6AZY7 606 aa17.21■□□□□ 0.35
PHTF1-205ENST00000393357 RAPH1Q70E73 1250 aa17.21■□□□□ 0.35
PHTF1-205ENST00000393357 PRPF39Q86UA1 669 aaKnown RBP17.21■□□□□ 0.35
PHTF1-205ENST00000393357 FAM71AQ8IYT1 594 aa17.21■□□□□ 0.35
PHTF1-205ENST00000393357 CERS5Q8N5B7 392 aa17.21■□□□□ 0.35
PHTF1-205ENST00000393357 PPM1NQ8N819 430 aa17.21■□□□□ 0.35
PHTF1-205ENST00000393357 FAM136AQ96C01 138 aa17.21■□□□□ 0.35
PHTF1-205ENST00000393357 DDX27Q96GQ7 796 aaKnown RBP17.21■□□□□ 0.35
PHTF1-205ENST00000393357 NDE1Q9NXR1 346 aa17.21■□□□□ 0.35
PHTF1-205ENST00000393357 ASB3Q9Y575 518 aa17.21■□□□□ 0.35
PHTF1-205ENST00000393357 IPO5O00410 1097 aaKnown RBP17.21■□□□□ 0.35
PHTF1-205ENST00000393357 CIB2O75838 187 aa17.21■□□□□ 0.35
PHTF1-205ENST00000393357 RAD17O75943 681 aa17.21■□□□□ 0.35
PHTF1-205ENST00000393357 WFS1O76024 890 aa17.21■□□□□ 0.35
PHTF1-205ENST00000393357 SMARCA1P28370 1054 aa17.21■□□□□ 0.35
PHTF1-205ENST00000393357 GDF10P55107 478 aa17.21■□□□□ 0.35
PHTF1-205ENST00000393357 TMED1Q13445 227 aa17.21■□□□□ 0.35
PHTF1-205ENST00000393357 CYP4A22Q5TCH4 519 aa17.21■□□□□ 0.35
PHTF1-205ENST00000393357 PAOXQ6QHF9 649 aa17.21■□□□□ 0.35
PHTF1-205ENST00000393357 NLRX1Q86UT6 975 aa17.21■□□□□ 0.35
PHTF1-205ENST00000393357 SATL1Q86VE3 508 aa17.21■□□□□ 0.35
PHTF1-205ENST00000393357 TREML1Q86YW5 311 aa17.21■□□□□ 0.35
PHTF1-205ENST00000393357 PPP1R14CQ8TAE6 165 aa17.21■□□□□ 0.35
PHTF1-205ENST00000393357 MMP19Q99542 508 aa17.21■□□□□ 0.35
PHTF1-205ENST00000393357 PSMC3IPQ9P2W1 217 aaPredicted RBP17.21■□□□□ 0.35
PHTF1-205ENST00000393357 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.21■□□□□ 0.34
PHTF1-205ENST00000393357 RNASEH1O60930 286 aaKnown RBP17.21■□□□□ 0.34
PHTF1-205ENST00000393357 TRPA1O75762 1119 aa17.21■□□□□ 0.34
PHTF1-205ENST00000393357 DSG3P32926 999 aa17.21■□□□□ 0.34
PHTF1-205ENST00000393357 PRELPP51888 382 aa17.21■□□□□ 0.34
PHTF1-205ENST00000393357 NFX1Q12986 1120 aaKnown RBP17.21■□□□□ 0.34
PHTF1-205ENST00000393357 XKR9Q5GH70 373 aa17.21■□□□□ 0.34
PHTF1-205ENST00000393357 TCHHL1Q5QJ38 904 aaPredicted RBP17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms